RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 SETD9Q8NE22 299 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 XPNPEP3Q9NQH7 507 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 VPS45Q9NRW7 570 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 ADARB2Q9NS39 739 aaKnown RBP18.31■□□□□ 0.52
COL5A3-201ENST00000264828 OR1E1P30953 314 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 SRP54P61011 504 aaKnown RBP18.31■□□□□ 0.52
COL5A3-201ENST00000264828 KBTBD2Q8IY47 623 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 ZNF276Q8N554 614 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 FUCA2Q9BTY2 467 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 SEMA4BQ9NPR2 832 aaPredicted RBP18.31■□□□□ 0.52
COL5A3-201ENST00000264828 ZMPSTE24O75844 475 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 VAV1P15498 845 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 ACAP1Q15027 740 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 FBXO47Q5MNV8 452 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 TMC7Q7Z402 723 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 SLC16A10Q8TF71 515 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 USP7Q93009 1102 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 ZNF184Q99676 751 aaPredicted RBP18.31■□□□□ 0.52
COL5A3-201ENST00000264828 HGH1Q9BTY7 390 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 EHD3Q9NZN3 535 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 SLC9A8Q9Y2E8 581 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 KCNK1O00180 336 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 TGM3Q08188 693 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 LY6KQ17RY6 165 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 C9orf131Q5VYM1 1079 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 MOXD1Q6UVY6 613 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 GMCL1P1Q8NEA9 526 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 UCMAQ8WVF2 138 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 ZNF606Q8WXB4 792 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 GLT1D1Q96MS3 346 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 CHST7Q9NS84 486 aa18.31■□□□□ 0.52
COL5A3-201ENST00000264828 NCOA3Q9Y6Q9 1424 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 CCNIQ14094 377 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 ZFP1Q6P2D0 407 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 KIFC1Q9BW19 673 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 CYP3A43Q9HB55 503 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 AAASQ9NRG9 546 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 ITGA11Q9UKX5 1188 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 DSEQ9UL01 958 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 BARX2Q9UMQ3 279 aaPredicted RBP18.3■□□□□ 0.52
COL5A3-201ENST00000264828 TMEM150BA6NC51 233 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 NCAM2O15394 837 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 UMPSP11172 480 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 MYL4P12829 197 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 CCDC130P13994 396 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 CNGA2Q16280 664 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 ADGRA1Q86SQ6 560 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 POMGNT2Q8NAT1 580 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 TLR8Q9NR97 1041 aaKnown RBP18.3■□□□□ 0.52
COL5A3-201ENST00000264828 SLIT1O75093 1534 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 HMGCRP04035 888 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 CDH8P55286 799 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 EXOC3L1Q86VI1 746 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 PGLYRP2Q96PD5 576 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 PACSIN3Q9UKS6 424 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 PSMD12O00232 456 aaPredicted RBP18.3■□□□□ 0.52
COL5A3-201ENST00000264828 CALCAP01258 141 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 SERPINF2P08697 491 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 ZNF37AP17032 561 aaPredicted RBP18.3■□□□□ 0.52
COL5A3-201ENST00000264828 TBX4P57082 545 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 NFIAQ12857 509 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 ATAD3BQ5T9A4 648 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 RAD21L1Q9H4I0 556 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 DNAJC18Q9H819 358 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 RAMP2O60895 175 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 SHBGP04278 402 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 ALADP13716 330 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 ZDHHC13Q8IUH4 622 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 SLC41A1Q8IVJ1 513 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 MAGEE2Q8TD90 523 aaPredicted RBP18.3■□□□□ 0.52
COL5A3-201ENST00000264828 SYT15Q9BQS2 421 aa18.3■□□□□ 0.52
COL5A3-201ENST00000264828 EFCAB3Q8N7B9 438 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 CAPSLQ8WWF8 208 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 ADI1Q9BV57 179 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 ARHGEF28Q8N1W1 1705 aaKnown RBP18.29■□□□□ 0.52
COL5A3-201ENST00000264828 ATXN2Q99700 1313 aaKnown RBP18.29■□□□□ 0.52
COL5A3-201ENST00000264828 TAF4O00268 1085 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 NEK3P51956 506 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 DOK6Q6PKX4 331 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 PLEKHH3Q7Z736 793 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 ACTRT2Q8TDY3 377 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 TAS2R13Q9NYV9 303 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 TNFRSF21O75509 655 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 PDE9AO76083 593 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 NUDT14O95848 222 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 TYMPP19971 482 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 EPHB3P54753 998 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 PURAQ00577 322 aaKnown RBP18.29■□□□□ 0.52
COL5A3-201ENST00000264828 NPNTQ6UXI9 565 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 C16orf59Q7L2K0 433 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 BBS4Q96RK4 519 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 ARMC7Q9H6L4 198 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 COG5Q9UP83 839 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 PIGNO95427 931 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 EIF2B5Q13144 721 aaKnown RBP18.29■□□□□ 0.52
COL5A3-201ENST00000264828 MYBPC2Q14324 1141 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 TMEM159Q96B96 161 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 ANKRD27Q96NW4 1050 aa18.29■□□□□ 0.52
COL5A3-201ENST00000264828 SAE1Q9UBE0 346 aaPredicted RBP18.29■□□□□ 0.52
COL5A3-201ENST00000264828 ADGRB1O14514 1584 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms