RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 DLGAP2Q9P1A6 1054 aa18.85■□□□□ 0.61
SDF4-201ENST00000263741 GUCA1BQ9UMX6 200 aa18.85■□□□□ 0.61
SDF4-201ENST00000263741 PPP2R2CQ9Y2T4 447 aa18.85■□□□□ 0.61
SDF4-201ENST00000263741 MFHAS1Q9Y4C4 1052 aa18.85■□□□□ 0.61
SDF4-201ENST00000263741 CHRM1P11229 460 aaPredicted RBP18.85■□□□□ 0.61
SDF4-201ENST00000263741 OR1E1P30953 314 aa18.85■□□□□ 0.61
SDF4-201ENST00000263741 HOXC13P31276 330 aa18.85■□□□□ 0.61
SDF4-201ENST00000263741 CDH6P55285 790 aa18.85■□□□□ 0.61
SDF4-201ENST00000263741 MMRN1Q13201 1228 aa18.85■□□□□ 0.61
SDF4-201ENST00000263741 LRRC32Q14392 662 aa18.85■□□□□ 0.61
SDF4-201ENST00000263741 DPYSL2Q16555 572 aa18.85■□□□□ 0.61
SDF4-201ENST00000263741 BMP8AQ7Z5Y6 402 aa18.85■□□□□ 0.61
SDF4-201ENST00000263741 ADIPOR2Q86V24 386 aa18.85■□□□□ 0.61
SDF4-201ENST00000263741 NLRP14Q86W24 1093 aa18.85■□□□□ 0.61
SDF4-201ENST00000263741 CCDC117Q8IWD4 279 aaPredicted RBP18.85■□□□□ 0.61
SDF4-201ENST00000263741 SUGP1Q8IWZ8 645 aaKnown RBP18.85■□□□□ 0.61
SDF4-201ENST00000263741 TEKT4Q8WW24 435 aa18.85■□□□□ 0.61
SDF4-201ENST00000263741 EXOC4Q96A65 974 aa18.85■□□□□ 0.61
SDF4-201ENST00000263741 ACOX2Q99424 681 aa18.85■□□□□ 0.61
SDF4-201ENST00000263741 NELL2Q99435 816 aa18.85■□□□□ 0.61
SDF4-201ENST00000263741 PCDH18Q9HCL0 1135 aa18.85■□□□□ 0.61
SDF4-201ENST00000263741 PPARGC1AQ9UBK2 798 aaKnown RBP18.85■□□□□ 0.61
SDF4-201ENST00000263741 A0A0D9SEW6 157 aa18.84■□□□□ 0.61
SDF4-201ENST00000263741 RHOCP08134 193 aa18.84■□□□□ 0.61
SDF4-201ENST00000263741 WASP42768 502 aa18.84■□□□□ 0.61
SDF4-201ENST00000263741 KRT81Q14533 505 aa18.84■□□□□ 0.61
SDF4-201ENST00000263741 BOLA3Q53S33 107 aa18.84■□□□□ 0.61
SDF4-201ENST00000263741 PITRM1Q5JRX3 1037 aa18.84■□□□□ 0.61
SDF4-201ENST00000263741 RNF219Q5W0B1 726 aaPredicted RBP18.84■□□□□ 0.61
SDF4-201ENST00000263741 C11orf63Q6NUN7 778 aa18.84■□□□□ 0.61
SDF4-201ENST00000263741 CCDC33Q8N5R6 958 aa18.84■□□□□ 0.61
SDF4-201ENST00000263741 CLDN23Q96B33 292 aa18.84■□□□□ 0.61
SDF4-201ENST00000263741 TRMT1Q9NXH9 659 aaKnown RBP18.84■□□□□ 0.61
SDF4-201ENST00000263741 LCMT1Q9UIC8 334 aa18.84■□□□□ 0.61
SDF4-201ENST00000263741 CKAP5Q14008 2032 aa18.84■□□□□ 0.61
SDF4-201ENST00000263741 GPR37L1O60883 481 aa18.83■□□□□ 0.61
SDF4-201ENST00000263741 RHOQP17081 205 aa18.83■□□□□ 0.61
SDF4-201ENST00000263741 CTSOP43234 321 aaPredicted RBP18.83■□□□□ 0.61
SDF4-201ENST00000263741 KIR2DL1P43626 348 aaPredicted RBP18.83■□□□□ 0.61
SDF4-201ENST00000263741 CLCN5P51795 746 aa18.83■□□□□ 0.61
SDF4-201ENST00000263741 ACBD5Q5T8D3 534 aaPredicted RBP18.83■□□□□ 0.61
SDF4-201ENST00000263741 MBLAC2Q68D91 279 aa18.83■□□□□ 0.61
SDF4-201ENST00000263741 RFX8Q6ZV50 586 aa18.83■□□□□ 0.61
SDF4-201ENST00000263741 AHI1Q8N157 1196 aa18.83■□□□□ 0.61
SDF4-201ENST00000263741 ALLCQ8N6M5 410 aa18.83■□□□□ 0.61
SDF4-201ENST00000263741 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.83■□□□□ 0.612e-6■■■■□ 26.2
SDF4-201ENST00000263741 OR7D4Q8NG98 312 aa18.83■□□□□ 0.61
SDF4-201ENST00000263741 CALN1Q9BXU9 219 aa18.83■□□□□ 0.61
SDF4-201ENST00000263741 MUC3BQ9H195 1237 aa18.83■□□□□ 0.61
SDF4-201ENST00000263741 PRR33A8MZF0 331 aa18.83■□□□□ 0.6
SDF4-201ENST00000263741 PALMO75781 387 aa18.83■□□□□ 0.6
SDF4-201ENST00000263741 MTAPQ13126 283 aa18.83■□□□□ 0.6
SDF4-201ENST00000263741 PLEKHG6Q3KR16 790 aa18.83■□□□□ 0.6
SDF4-201ENST00000263741 DGKKQ5KSL6 1271 aa18.83■□□□□ 0.6
SDF4-201ENST00000263741 PSTKQ8IV42 348 aaKnown RBP18.83■□□□□ 0.6
SDF4-201ENST00000263741 ZNF513Q8N8E2 541 aaPredicted RBP18.83■□□□□ 0.6
SDF4-201ENST00000263741 LRRC57Q8N9N7 239 aa18.83■□□□□ 0.6
SDF4-201ENST00000263741 RAPGEF5Q92565 580 aa18.83■□□□□ 0.6
SDF4-201ENST00000263741 KRT35Q92764 455 aa18.83■□□□□ 0.6
SDF4-201ENST00000263741 LRFN3Q9BTN0 628 aa18.83■□□□□ 0.6
SDF4-201ENST00000263741 OSBPL6Q9BZF3 934 aa18.83■□□□□ 0.6
SDF4-201ENST00000263741 CHRDQ9H2X0 955 aa18.83■□□□□ 0.6
SDF4-201ENST00000263741 TMEM248Q9NWD8 314 aa18.83■□□□□ 0.6
SDF4-201ENST00000263741 KIAA1522Q9P206 1035 aaPredicted RBP18.83■□□□□ 0.6
SDF4-201ENST00000263741 TBC1D30Q9Y2I9 924 aa18.83■□□□□ 0.6
SDF4-201ENST00000263741 NCAM2O15394 837 aa18.82■□□□□ 0.6
SDF4-201ENST00000263741 FTCDO95954 541 aa18.82■□□□□ 0.6
SDF4-201ENST00000263741 KRT1P04264 644 aa18.82■□□□□ 0.6
SDF4-201ENST00000263741 GLDCP23378 1020 aa18.82■□□□□ 0.6
SDF4-201ENST00000263741 SLC1A1P43005 524 aa18.82■□□□□ 0.6
SDF4-201ENST00000263741 POLNQ7Z5Q5 900 aa18.82■□□□□ 0.6
SDF4-201ENST00000263741 KIAA0907Q7Z7F0 614 aaPredicted RBP18.82■□□□□ 0.6
SDF4-201ENST00000263741 TXLNBQ8N3L3 684 aa18.82■□□□□ 0.6
SDF4-201ENST00000263741 RTL3Q8N8U3 475 aaKnown RBP18.82■□□□□ 0.6
SDF4-201ENST00000263741 USP33Q8TEY7 942 aa18.82■□□□□ 0.6
SDF4-201ENST00000263741 CSPG4P5Q96PW8 444 aa18.82■□□□□ 0.6
SDF4-201ENST00000263741 C1QTNF1Q9BXJ1 281 aa18.82■□□□□ 0.6
SDF4-201ENST00000263741 ELOVL2Q9NXB9 296 aa18.82■□□□□ 0.6
SDF4-201ENST00000263741 CACNA2D2Q9NY47 1150 aa18.82■□□□□ 0.6
SDF4-201ENST00000263741 PACSIN2Q9UNF0 486 aaPredicted RBP18.82■□□□□ 0.6
SDF4-201ENST00000263741 A0A0A0MRY4 1105 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 LRRD1A4D1F6 860 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 WASH3PC4AMC7 463 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 H3BRJ5 948 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 DAPK3O43293 454 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 KLF8O95600 359 aaPredicted RBP18.81■□□□□ 0.6
SDF4-201ENST00000263741 KRT7P08729 469 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 AMPD1P23109 780 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 ACVRL1P37023 503 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 TNFRSF4P43489 277 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 ARSEP51690 589 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 DPYSQ14117 519 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 DPYSL3Q14195 570 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 LLGL1Q15334 1064 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 PREPLQ4J6C6 727 aaPredicted RBP18.81■□□□□ 0.6
SDF4-201ENST00000263741 NPWQ8N729 165 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 ZNF366Q8N895 744 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 KCTD6Q8NC69 237 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 ALG14Q96F25 216 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 CELF6Q96J87 481 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms