RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 DARS2Q6PI48 645 aaKnown RBP10□□□□□ -0.81
SNRNP40-201ENST00000263694 DDX42Q86XP3 938 aaKnown RBP eCLIP10□□□□□ -0.81
SNRNP40-201ENST00000263694 FAM217AQ8IXS0 508 aa10□□□□□ -0.81
SNRNP40-201ENST00000263694 ADGRG2Q8IZP9 1017 aa10□□□□□ -0.81
SNRNP40-201ENST00000263694 CARNMT1Q8N4J0 409 aa10□□□□□ -0.81
SNRNP40-201ENST00000263694 CCNYQ8ND76 341 aa10□□□□□ -0.81
SNRNP40-201ENST00000263694 DDI1Q8WTU0 396 aa10□□□□□ -0.81
SNRNP40-201ENST00000263694 SUSD6Q92537 303 aa10□□□□□ -0.81
SNRNP40-201ENST00000263694 FGF14Q92915 247 aa10□□□□□ -0.81
SNRNP40-201ENST00000263694 CCDC114Q96M63 670 aa10□□□□□ -0.81
SNRNP40-201ENST00000263694 OLFM3Q96PB7 478 aa10□□□□□ -0.81
SNRNP40-201ENST00000263694 DDX50Q9BQ39 737 aaKnown RBP10□□□□□ -0.81
SNRNP40-201ENST00000263694 TRIM51Q9BSJ1 452 aa10□□□□□ -0.81
SNRNP40-201ENST00000263694 ZMYM5Q9UJ78 669 aa10□□□□□ -0.81
SNRNP40-201ENST00000263694 ZNF148Q9UQR1 794 aa10□□□□□ -0.81
SNRNP40-201ENST00000263694 ZNF510Q9Y2H8 683 aa10□□□□□ -0.81
SNRNP40-201ENST00000263694 KIF26AQ9ULI4 1882 aaPredicted RBP10□□□□□ -0.81
SNRNP40-201ENST00000263694 PRUNE2Q8WUY3 3088 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 A0A0D9SEW6 157 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 ZSCAN5CA6NGD5 496 aaPredicted RBP9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 WASH4PA8MWX3 477 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 MCF2LO15068 1137 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 ZSCAN5DPP0CG00 497 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 ARSAP15289 507 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 VAV1P15498 845 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 TCF3P15923 654 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 RBL1P28749 1068 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 WEE1P30291 646 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 CHRNA3P32297 505 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 HTR7P34969 479 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 ACVRL1P37023 503 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 NR2C2P49116 596 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 TERF1P54274 439 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 AP1B1Q10567 949 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 MTA1Q13330 715 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 TRADDQ15628 312 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 LY6G5CQ5SRR4 150 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 AFMIDQ63HM1 303 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 RHBDF2Q6PJF5 856 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 VITQ6UXI7 678 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 LEKR1Q6ZMV7 388 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 CPXM2Q8N436 756 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 TAB3Q8N5C8 712 aaPredicted RBP9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 FAM71DQ8N9W8 422 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 TTC13Q8NBP0 860 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 OR7D4Q8NG98 312 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 ATL2Q8NHH9 583 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 TTC8Q8TAM2 541 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 BPIFB1Q8TDL5 484 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 RSAD2Q8WXG1 361 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 HMCESQ96FZ2 354 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 RPGRIP1Q96KN7 1286 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 CEP41Q9BYV8 373 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 KIF9Q9HAQ2 790 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 USP29Q9HBJ7 922 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 ZFP14Q9HCL3 533 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 PRDM6Q9NQX0 595 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 DUS2Q9NX74 493 aaKnown RBP9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 PCYOX1Q9UHG3 505 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 DMGDHQ9UI17 866 aaKnown RBP9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 MYO10Q9HD67 2058 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 CHD5Q8TDI0 1954 aa9.99□□□□□ -0.81
SNRNP40-201ENST00000263694 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 OTOL1A6NHN0 477 aaPredicted RBP9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 EFCAB8A8MWE9 144 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 RASA4BC9J798 803 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 NEDD8-MDP1E9PL57 170 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 SGK1O00141 431 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 RASA4O43374 803 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 MBTPS2O43462 519 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 IFNB1P01574 187 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 HOXD9P28356 352 aaPredicted RBP9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 CHKAP35790 457 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 FNTAP49354 379 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 VPS41P49754 854 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 PAPOLAP51003 745 aaKnown RBP9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 CDH4P55283 916 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 DR1Q01658 176 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 TNK2Q07912 1038 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 GALNT2Q10471 571 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 ZNF177Q13360 481 aaPredicted RBP9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 ANO4Q32M45 955 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 EML3Q32P44 896 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 MPPE1Q53F39 396 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 ACBD5Q5T8D3 534 aaPredicted RBP9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 FYB2Q5VWT5 728 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 RNF219Q5W0B1 726 aaPredicted RBP9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 GPR153Q6NV75 609 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 C8orf74Q6P047 294 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 GSTA5Q7RTV2 222 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 ZNF354CQ86Y25 554 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 JAMLQ86YT9 394 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 UMODL1-AS1Q8N2C9 162 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 NAT16Q8N8M0 369 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 HJURPQ8NCD3 748 aaPredicted RBP9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 MYRIPQ8NFW9 859 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 IRF7Q92985 503 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 NKD2Q969F2 451 aaPredicted RBP9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 TRIM31Q9BZY9 425 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 EBF3Q9H4W6 596 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms