RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 ZDHHC6Q9H6R6 413 aa14.54□□□□□ -0.08
CUX2-201ENST00000261726 RXFP1Q9HBX9 757 aa14.54□□□□□ -0.08
CUX2-201ENST00000261726 CPA4Q9UI42 421 aa14.54□□□□□ -0.08
CUX2-201ENST00000261726 COG5Q9UP83 839 aa14.54□□□□□ -0.08
CUX2-201ENST00000261726 PSMD11O00231 422 aa14.54□□□□□ -0.08
CUX2-201ENST00000261726 NFKB1P19838 968 aa14.54□□□□□ -0.08
CUX2-201ENST00000261726 ITGA3P26006 1051 aa14.54□□□□□ -0.08
CUX2-201ENST00000261726 ZCCHC23Q6ZST2 131 aa14.54□□□□□ -0.08
CUX2-201ENST00000261726 ERO1BQ86YB8 467 aa14.54□□□□□ -0.08
CUX2-201ENST00000261726 CSGALNACT1Q8TDX6 532 aa14.54□□□□□ -0.08
CUX2-201ENST00000261726 SETD4Q9NVD3 440 aa14.54□□□□□ -0.08
CUX2-201ENST00000261726 TAS2R13Q9NYV9 303 aa14.54□□□□□ -0.08
CUX2-201ENST00000261726 EHD3Q9NZN3 535 aa14.54□□□□□ -0.08
CUX2-201ENST00000261726 NAALADL1Q9UQQ1 740 aa14.54□□□□□ -0.08
CUX2-201ENST00000261726 PCDHB5Q9Y5E4 795 aa14.54□□□□□ -0.08
CUX2-201ENST00000261726 KPNA3O00505 521 aaPredicted RBP14.53□□□□□ -0.08
CUX2-201ENST00000261726 ECDO95905 644 aaPredicted RBP14.53□□□□□ -0.08
CUX2-201ENST00000261726 DPEP1P16444 411 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 TPP2P29144 1249 aaPredicted RBP14.53□□□□□ -0.08
CUX2-201ENST00000261726 CDH17Q12864 832 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 FBXO47Q5MNV8 452 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 OVOS1Q6IE37 1185 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 AGMOQ6ZNB7 445 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 KRT73Q86Y46 540 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 TRAPPC5Q8IUR0 188 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 LINC00116Q8NCU8 138 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 FBXO25Q8TCJ0 367 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 SYT15Q9BQS2 421 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 PIGUQ9H490 435 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 NMRAL1Q9HBL8 299 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 ZW10O43264 779 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 RGS14O43566 566 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 EPN2O95208 641 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 CTSEP14091 401 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 ZNF37AP17032 561 aaPredicted RBP14.53□□□□□ -0.08
CUX2-201ENST00000261726 ELK3P41970 407 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 FAM171A1Q5VUB5 890 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 MARK2Q7KZI7 788 aaKnown RBP14.53□□□□□ -0.08
CUX2-201ENST00000261726 RGL4Q8IZJ4 473 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 SETD9Q8NE22 299 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 ZNF518BQ9C0D4 1074 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 PROSCO94903 275 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 VAPBO95292 243 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 LAMTOR4Q0VGL1 99 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 EZH2Q15910 746 aaKnown RBP14.53□□□□□ -0.08
CUX2-201ENST00000261726 RPTNQ6XPR3 784 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 CHPFQ8IZ52 775 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 IGSF6O95976 241 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 RPN2P04844 631 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 CCDC130P13994 396 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 BRSK2Q8IWQ3 736 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 ACER1Q8TDN7 264 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 ACTRT2Q8TDY3 377 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 ANKRD7Q92527 254 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 TAF6LQ9Y6J9 622 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 MAGEB16A2A368 324 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 MICAL2O94851 1124 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 CYP2A6P11509 494 aaPredicted RBP14.53□□□□□ -0.08
CUX2-201ENST00000261726 CD44P16070 742 aaKnown RBP14.53□□□□□ -0.08
CUX2-201ENST00000261726 AMPD1P23109 780 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 APLFQ8IW19 511 aaPredicted RBP14.53□□□□□ -0.08
CUX2-201ENST00000261726 MBD2Q9UBB5 411 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 TSPAN16Q9UKR8 245 aa14.53□□□□□ -0.08
CUX2-201ENST00000261726 F8VZ95 297 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 PGAM1P18669 254 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 RCVRNP35243 200 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 PSMD4P55036 377 aaKnown RBP14.52□□□□□ -0.08
CUX2-201ENST00000261726 C21orf59P57076 290 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 COPZ1P61923 177 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 RETSATQ6NUM9 610 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 TPGS1Q6ZTW0 290 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 ARRDC4Q8NCT1 418 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 FBXO30Q8TB52 745 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 DNAJB3Q8WWF6 145 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 ARMCX1Q9P291 453 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 SLC24A2Q9UI40 661 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 MRPS7Q9Y2R9 242 aaKnown RBP14.52□□□□□ -0.08
CUX2-201ENST00000261726 S100A3P33764 101 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 NDST1P52848 882 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 MTAPQ13126 283 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 TRMT5Q32P41 509 aaKnown RBP14.52□□□□□ -0.08
CUX2-201ENST00000261726 SMYD1Q8NB12 490 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 TCP10LQ8TDR4 215 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 MARK4Q96L34 752 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 TMEM138Q9NPI0 162 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 SLC35C2Q9NQQ7 365 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 ZBTB14O43829 449 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 CRABP2P29373 138 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 RXRGP48443 463 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 BCL2L1Q07817 233 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 PUDPQ08623 228 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 PLD1Q13393 1074 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 GIT2Q14161 759 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 LY6KQ17RY6 165 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 POM121L1PQ3SYA9 428 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 UTS2BQ765I0 119 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 FAM220AQ7Z4H9 259 aa14.52□□□□□ -0.08
CUX2-201ENST00000261726 SEMA4BQ9NPR2 832 aaPredicted RBP14.52□□□□□ -0.08
CUX2-201ENST00000261726 USP32Q8NFA0 1604 aa14.52□□□□□ -0.09
CUX2-201ENST00000261726 SERPINE1P05121 402 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms