RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 ATP6AP2O75787 350 aa16.52■□□□□ 0.23
SREBF1-201ENST00000261646 FKBP9O95302 570 aa16.52■□□□□ 0.23
SREBF1-201ENST00000261646 CYP2C8P10632 490 aa16.52■□□□□ 0.23
SREBF1-201ENST00000261646 NCAM1P13591 858 aa16.52■□□□□ 0.23
SREBF1-201ENST00000261646 PSMB4P28070 264 aa16.52■□□□□ 0.23
SREBF1-201ENST00000261646 ACADSBP45954 432 aa16.52■□□□□ 0.23
SREBF1-201ENST00000261646 CLCN3P51790 818 aa16.52■□□□□ 0.23
SREBF1-201ENST00000261646 GPX6P59796 221 aa16.52■□□□□ 0.23
SREBF1-201ENST00000261646 PTPN20Q4JDL3 420 aa16.52■□□□□ 0.23
SREBF1-201ENST00000261646 FKBP9P1Q75LS8 142 aa16.52■□□□□ 0.23
SREBF1-201ENST00000261646 LINC00523Q86TU6 105 aa16.52■□□□□ 0.23
SREBF1-201ENST00000261646 KIAA1257Q9ULG3 409 aa16.52■□□□□ 0.23
SREBF1-201ENST00000261646 RNASEH1O60930 286 aaKnown RBP16.52■□□□□ 0.23
SREBF1-201ENST00000261646 ASLP04424 464 aa16.52■□□□□ 0.23
SREBF1-201ENST00000261646 TWF2Q6IBS0 349 aaKnown RBP16.52■□□□□ 0.23
SREBF1-201ENST00000261646 HSPBAP1Q96EW2 488 aa16.52■□□□□ 0.23
SREBF1-201ENST00000261646 NSMCE2Q96MF7 247 aa16.52■□□□□ 0.23
SREBF1-201ENST00000261646 KCTD14Q9BQ13 255 aaPredicted RBP16.52■□□□□ 0.23
SREBF1-201ENST00000261646 SNRNP25Q9BV90 132 aaKnown RBP16.52■□□□□ 0.23
SREBF1-201ENST00000261646 PRMT7Q9NVM4 692 aaPredicted RBP16.52■□□□□ 0.23
SREBF1-201ENST00000261646 DPP3Q9NY33 737 aa16.52■□□□□ 0.23
SREBF1-201ENST00000261646 EURLQ9NYK6 297 aa16.52■□□□□ 0.23
SREBF1-201ENST00000261646 RAP2CQ9Y3L5 183 aa16.52■□□□□ 0.23
SREBF1-201ENST00000261646 PDE4DIPQ5VU43 2346 aa16.51■□□□□ 0.23
SREBF1-201ENST00000261646 CRTAMO95727 393 aa16.51■□□□□ 0.23
SREBF1-201ENST00000261646 TCF4P15884 667 aa16.51■□□□□ 0.23
SREBF1-201ENST00000261646 MPSTP25325 297 aa16.51■□□□□ 0.23
SREBF1-201ENST00000261646 SLC5A3P53794 718 aa16.51■□□□□ 0.23
SREBF1-201ENST00000261646 CACNB2Q08289 660 aaPredicted RBP16.51■□□□□ 0.23
SREBF1-201ENST00000261646 SPANXN3Q5MJ09 141 aa16.51■□□□□ 0.23
SREBF1-201ENST00000261646 EGFLAMQ63HQ2 1017 aa16.51■□□□□ 0.23
SREBF1-201ENST00000261646 TRMT10BQ6PF06 316 aaKnown RBP16.51■□□□□ 0.23
SREBF1-201ENST00000261646 TREML1Q86YW5 311 aa16.51■□□□□ 0.23
SREBF1-201ENST00000261646 APPL2Q8NEU8 664 aa16.51■□□□□ 0.23
SREBF1-201ENST00000261646 TCRBV7S3A2A0A539 114 aa16.51■□□□□ 0.23
SREBF1-201ENST00000261646 TTLL13PA6NNM8 815 aa16.51■□□□□ 0.23
SREBF1-201ENST00000261646 H3BSA7 217 aa16.51■□□□□ 0.23
SREBF1-201ENST00000261646 ASTN2O75129 1339 aaPredicted RBP16.51■□□□□ 0.23
SREBF1-201ENST00000261646 TCF7P36402 384 aaPredicted RBP16.51■□□□□ 0.23
SREBF1-201ENST00000261646 IL5RAQ01344 420 aa16.51■□□□□ 0.23
SREBF1-201ENST00000261646 RSBN1Q5VWQ0 802 aaPredicted RBP16.51■□□□□ 0.23
SREBF1-201ENST00000261646 SH3BP5LQ7L8J4 393 aa16.51■□□□□ 0.23
SREBF1-201ENST00000261646 CAB39LQ9H9S4 337 aa16.51■□□□□ 0.23
SREBF1-201ENST00000261646 RGS5O15539 181 aa16.51■□□□□ 0.23
SREBF1-201ENST00000261646 TYROBPO43914 113 aa16.51■□□□□ 0.23
SREBF1-201ENST00000261646 UGT1A9O60656 530 aa16.51■□□□□ 0.23
SREBF1-201ENST00000261646 CCNA2P20248 432 aa16.51■□□□□ 0.23
SREBF1-201ENST00000261646 KLRC2P26717 231 aa16.51■□□□□ 0.23
SREBF1-201ENST00000261646 ZNF143P52747 638 aaPredicted RBP16.51■□□□□ 0.23
SREBF1-201ENST00000261646 CRY2Q49AN0 593 aa16.51■□□□□ 0.23
SREBF1-201ENST00000261646 RMDN1Q96DB5 314 aa16.51■□□□□ 0.23
SREBF1-201ENST00000261646 ZNF560Q96MR9 790 aa16.51■□□□□ 0.23
SREBF1-201ENST00000261646 DHX33Q9H6R0 707 aaKnown RBP16.51■□□□□ 0.23
SREBF1-201ENST00000261646 UGT1A7Q9HAW7 530 aa16.51■□□□□ 0.23
SREBF1-201ENST00000261646 UGT1A10Q9HAW8 530 aa16.51■□□□□ 0.23
SREBF1-201ENST00000261646 UGT1A8Q9HAW9 530 aa16.51■□□□□ 0.23
SREBF1-201ENST00000261646 STK39Q9UEW8 545 aa16.51■□□□□ 0.23
SREBF1-201ENST00000261646 EGFL7Q9UHF1 273 aa16.51■□□□□ 0.23
SREBF1-201ENST00000261646 WDR47O94967 919 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 OAS1P00973 400 aaKnown RBP16.5■□□□□ 0.23
SREBF1-201ENST00000261646 JAK1P23458 1154 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 LSM3P62310 102 aaKnown RBP16.5■□□□□ 0.23
SREBF1-201ENST00000261646 CXCL9Q07325 125 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 RALGDSQ12967 914 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 DGCR6Q14129 220 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 NOMO1Q15155 1222 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 TXNRD3NBQ6F5E7 133 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 RHBDF2Q6PJF5 856 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 SAMD3Q8N6K7 520 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 DCAKDQ8WVC6 231 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 PRR11Q96HE9 360 aaPredicted RBP16.5■□□□□ 0.23
SREBF1-201ENST00000261646 BBS2Q9BXC9 721 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 SPAG4Q9NPE6 437 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 CIDEBQ9UHD4 219 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 A0A0A0MRY4 1105 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 STAG3L1P0CL83 205 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 NR2C2P49116 596 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 MSS51Q4VC12 460 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 DRICH1Q6PGQ1 229 aaPredicted RBP16.5■□□□□ 0.23
SREBF1-201ENST00000261646 ABRAXAS1Q6UWZ7 409 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 HERC6Q8IVU3 1022 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 CAPSLQ8WWF8 208 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 COX4I2Q96KJ9 171 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 SPATA13Q96N96 652 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 LIN28AQ9H9Z2 209 aaKnown RBP16.5■□□□□ 0.23
SREBF1-201ENST00000261646 UTP6Q9NYH9 597 aaKnown RBP16.5■□□□□ 0.23
SREBF1-201ENST00000261646 EFR3BQ9Y2G0 817 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 SPEF2Q9C093 1822 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 PLIN3O60664 434 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 RBP1P09455 135 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 DLDP09622 509 aaKnown RBP16.5■□□□□ 0.23
SREBF1-201ENST00000261646 T-ENOLP0DO92 83 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 TXNP10599 105 aaKnown RBP16.5■□□□□ 0.23
SREBF1-201ENST00000261646 SLC7A2P52569 658 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 GTF2A2P52657 109 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 SPIDRQ14159 915 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 C15orf52Q6ZUT6 534 aaKnown RBP16.5■□□□□ 0.23
SREBF1-201ENST00000261646 ZDHHC14Q8IZN3 488 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 CD101Q93033 1021 aa16.5■□□□□ 0.23
SREBF1-201ENST00000261646 MAGED4Q96JG8 741 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms