RNA–Protein interactions for RNA: ENST00000261448.5

CASQ2-201, Transcript of calsequestrin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASQ2, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2-201ENST00000261448 VAT1Q99536 393 aa12.12□□□□□ -0.47
CASQ2-201ENST00000261448 SLC39A8Q9C0K1 460 aa12.12□□□□□ -0.47
CASQ2-201ENST00000261448 MPP6Q9NZW5 540 aa12.12□□□□□ -0.47
CASQ2-201ENST00000261448 TLR6Q9Y2C9 796 aa12.12□□□□□ -0.47
CASQ2-201ENST00000261448 MTMR11A4FU01 709 aa12.12□□□□□ -0.47
CASQ2-201ENST00000261448 E9PAM4 449 aa12.12□□□□□ -0.47
CASQ2-201ENST00000261448 DFFAO00273 331 aa12.12□□□□□ -0.47
CASQ2-201ENST00000261448 MAFKO60675 156 aa12.12□□□□□ -0.47
CASQ2-201ENST00000261448 DHRS4L1P0CG22 281 aa12.12□□□□□ -0.47
CASQ2-201ENST00000261448 MAGEA9P43362 315 aa12.12□□□□□ -0.47
CASQ2-201ENST00000261448 TUBP50607 506 aa12.12□□□□□ -0.47
CASQ2-201ENST00000261448 ATN1P54259 1190 aaPredicted RBP12.12□□□□□ -0.47
CASQ2-201ENST00000261448 NIPAL4Q0D2K0 466 aa12.12□□□□□ -0.47
CASQ2-201ENST00000261448 GPR17Q13304 367 aa12.12□□□□□ -0.47
CASQ2-201ENST00000261448 PIK3R6Q5UE93 754 aa12.12□□□□□ -0.47
CASQ2-201ENST00000261448 CES3Q6UWW8 571 aa12.12□□□□□ -0.47
CASQ2-201ENST00000261448 ZNF75CPQ92670 426 aaPredicted RBP12.12□□□□□ -0.47
CASQ2-201ENST00000261448 TBC1D31Q96DN5 1066 aa12.12□□□□□ -0.47
CASQ2-201ENST00000261448 FCRL3Q96P31 734 aaPredicted RBP12.12□□□□□ -0.47
CASQ2-201ENST00000261448 TSGA13Q96PP4 275 aa12.12□□□□□ -0.47
CASQ2-201ENST00000261448 KDM4CQ9H3R0 1056 aa12.12□□□□□ -0.47
CASQ2-201ENST00000261448 PLXNA3P51805 1871 aa12.12□□□□□ -0.47
CASQ2-201ENST00000261448 SCN5AQ14524 2016 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 WDR91A4D1P6 747 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 ARHGAP42A6NI28 874 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 TBKBP1A7MCY6 615 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 FGF10O15520 208 aaPredicted RBP12.11□□□□□ -0.47
CASQ2-201ENST00000261448 CPB1P15086 417 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 CCNCP24863 283 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 HTR7P34969 479 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 ZNF33AQ06730 810 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 RASIP1Q5U651 963 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 OTOP3Q7RTS5 596 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 CCNJLQ8IV13 435 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 ZNF683Q8IZ20 524 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 C1orf74Q96LT6 269 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 CATSPERBQ9H7T0 1116 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 CASS4Q9NQ75 786 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 UBP1Q9NZI7 540 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 IL1RAPL1Q9NZN1 696 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 OGDHLQ9ULD0 1010 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 PHTF1Q9UMS5 762 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.11□□□□□ -0.47
CASQ2-201ENST00000261448 CACNG3O60359 315 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 CXCL10P02778 98 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 CCNB1P14635 433 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 YWHAQP27348 245 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 NRG1Q02297 640 aaPredicted RBP12.11□□□□□ -0.47
CASQ2-201ENST00000261448 MGAT5Q09328 741 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 MGAT5BQ3V5L5 792 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 LACTB2Q53H82 288 aaPredicted RBP12.11□□□□□ -0.47
CASQ2-201ENST00000261448 LGSNQ5TDP6 509 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 MROH9Q5TGP6 573 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 AFMIDQ63HM1 303 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 PRSS55Q6UWB4 352 aaPredicted RBP12.11□□□□□ -0.47
CASQ2-201ENST00000261448 TRPM8Q7Z2W7 1104 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 LRRC8CQ8TDW0 803 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 USP33Q8TEY7 942 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 VPS11Q9H270 941 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 HIPK3Q9H422 1215 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 ABCF3Q9NUQ8 709 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 SAGE1Q9NXZ1 904 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 GGT7Q9UJ14 662 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 PSAT1Q9Y617 370 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 SHROOM3Q8TF72 1996 aa12.11□□□□□ -0.47
CASQ2-201ENST00000261448 EDF1O60869 148 aaKnown RBP12.1□□□□□ -0.47
CASQ2-201ENST00000261448 KRT38O76015 456 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 EFEMP1Q12805 493 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 TAF10Q12962 218 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 ITPRIPL1Q6GPH6 555 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 MARK2Q7KZI7 788 aaKnown RBP12.1□□□□□ -0.47
CASQ2-201ENST00000261448 ARHGAP18Q8N392 663 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.1□□□□□ -0.47
CASQ2-201ENST00000261448 LZTR1Q8N653 840 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 RTL3Q8N8U3 475 aaKnown RBP12.1□□□□□ -0.47
CASQ2-201ENST00000261448 CCDC63Q8NA47 563 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 PTPRN2Q92932 1015 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 FBXO32Q969P5 355 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 FAM111AQ96PZ2 611 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 SRPK1Q96SB4 655 aaKnown RBP12.1□□□□□ -0.47
CASQ2-201ENST00000261448 APOL2Q9BQE5 337 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 TMEM175Q9BSA9 504 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 NAT9Q9BTE0 207 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 NOL6Q9H6R4 1146 aaKnown RBP12.1□□□□□ -0.47
CASQ2-201ENST00000261448 ALG13Q9NP73 1137 aaKnown RBP12.1□□□□□ -0.47
CASQ2-201ENST00000261448 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.1□□□□□ -0.47
CASQ2-201ENST00000261448 VANGL2Q9ULK5 521 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 STARD13Q9Y3M8 1113 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 MKI67P46013 3256 aaKnown RBP12.1□□□□□ -0.47
CASQ2-201ENST00000261448 ERI2A8K979 691 aaKnown RBP12.1□□□□□ -0.47
CASQ2-201ENST00000261448 FSBPO95073 299 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 POLBP06746 335 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 HAPLN1P10915 354 aaPredicted RBP12.1□□□□□ -0.47
CASQ2-201ENST00000261448 CCNFP41002 786 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 TBX4P57082 545 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 COG7P83436 770 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 ACTN3Q08043 901 aaPredicted RBP12.1□□□□□ -0.47
CASQ2-201ENST00000261448 DUSP4Q13115 394 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 SMAD1Q15797 465 aaKnown RBP12.1□□□□□ -0.47
CASQ2-201ENST00000261448 SEPT7Q16181 437 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms