RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 ADCY6O43306 1168 aa11.07□□□□□ -0.64
CHRNA1-201ENST00000261007 SIN3BO75182 1162 aa11.07□□□□□ -0.64
CHRNA1-201ENST00000261007 PROCP04070 461 aa11.07□□□□□ -0.64
CHRNA1-201ENST00000261007 ITGAXP20702 1163 aa11.07□□□□□ -0.64
CHRNA1-201ENST00000261007 RPL34P49207 117 aaKnown RBP11.07□□□□□ -0.64
CHRNA1-201ENST00000261007 HDAC4P56524 1084 aa11.07□□□□□ -0.64
CHRNA1-201ENST00000261007 DYNLT1P63172 113 aa11.07□□□□□ -0.64
CHRNA1-201ENST00000261007 TAF1CQ15572 869 aaPredicted RBP11.07□□□□□ -0.64
CHRNA1-201ENST00000261007 MYLK3Q32MK0 819 aa11.07□□□□□ -0.64
CHRNA1-201ENST00000261007 KCNT1Q5JUK3 1230 aa11.07□□□□□ -0.64
CHRNA1-201ENST00000261007 ZFP1Q6P2D0 407 aa11.07□□□□□ -0.64
CHRNA1-201ENST00000261007 SLC26A9Q7LBE3 791 aa11.07□□□□□ -0.64
CHRNA1-201ENST00000261007 ACOT1Q86TX2 421 aa11.07□□□□□ -0.64
CHRNA1-201ENST00000261007 HACE1Q8IYU2 909 aa11.07□□□□□ -0.64
CHRNA1-201ENST00000261007 FAM71DQ8N9W8 422 aa11.07□□□□□ -0.64
CHRNA1-201ENST00000261007 ADCY4Q8NFM4 1077 aa11.07□□□□□ -0.64
CHRNA1-201ENST00000261007 DNAJB3Q8WWF6 145 aa11.07□□□□□ -0.64
CHRNA1-201ENST00000261007 ACSF2Q96CM8 615 aaPredicted RBP11.07□□□□□ -0.64
CHRNA1-201ENST00000261007 GCNAQ96QF7 691 aa11.07□□□□□ -0.64
CHRNA1-201ENST00000261007 ZNF670Q9BS34 389 aa11.07□□□□□ -0.64
CHRNA1-201ENST00000261007 SENP6Q9GZR1 1112 aaPredicted RBP11.07□□□□□ -0.64
CHRNA1-201ENST00000261007 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.07□□□□□ -0.64
CHRNA1-201ENST00000261007 RHBDL2Q9NX52 303 aa11.07□□□□□ -0.64
CHRNA1-201ENST00000261007 SAE1Q9UBE0 346 aaPredicted RBP11.07□□□□□ -0.64
CHRNA1-201ENST00000261007 TUBGCP4Q9UGJ1 667 aa11.07□□□□□ -0.64
CHRNA1-201ENST00000261007 BCAP29Q9UHQ4 241 aa11.07□□□□□ -0.64
CHRNA1-201ENST00000261007 CPA4Q9UI42 421 aa11.07□□□□□ -0.64
CHRNA1-201ENST00000261007 SMIM28A0A1B0GU29 152 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 CCDC195A0A1B0GUA6 201 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 CAPN8A6NHC0 703 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 KPNA7A9QM74 516 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 M0QZ92 97 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 CYB561D2O14569 222 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 TRMUO75648 421 aaKnown RBP11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 ZNF189O75820 626 aaPredicted RBP11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 CAPNS1P04632 268 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 RBP3P10745 1247 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 HOXC8P31273 242 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 YWHAZP63104 245 aaKnown RBP11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 CCDC14Q49A88 953 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 RARS2Q5T160 578 aaKnown RBP11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 TEDDM1Q5T9Z0 273 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 DENND5BQ6ZUT9 1274 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 LIMS2Q7Z4I7 341 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 TTC30AQ86WT1 665 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 TICAM1Q8IUC6 712 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 NDUFAF2Q8N183 169 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 TOP6BLQ8N6T0 577 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 APPL2Q8NEU8 664 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 PPP1R14CQ8TAE6 165 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 SHKBP1Q8TBC3 707 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 SPATA18Q8TC71 538 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 ACMSDQ8TDX5 336 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 DNAJC1Q96KC8 554 aaKnown RBP11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 RNF157Q96PX1 679 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 RTKNQ9BST9 563 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 APOL6Q9BWW8 343 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 SLC13A1Q9BZW2 595 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 NXF3Q9H4D5 531 aaKnown RBP11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 C10orf88Q9H8K7 445 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 POPDC2Q9HBU9 364 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 UBAP1Q9NZ09 502 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 PAK5Q9P286 719 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 ZC3H7BQ9UGR2 993 aaKnown RBP11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 PRPF19Q9UMS4 504 aaKnown RBP11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 ARHGAP26Q9UNA1 814 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 DNAJC16Q9Y2G8 782 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 AK5Q9Y6K8 562 aa11.06□□□□□ -0.64
CHRNA1-201ENST00000261007 CCDC160A6NGH7 325 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 CXorf49A8MYA2 514 aaPredicted RBP11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 APOL1O14791 398 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 HUS1O60921 280 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 PDE5AO76074 875 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 CRTAMO95727 393 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 APOEP02649 317 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 MYL3P08590 195 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 FAM58BPP0C7Q3 252 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 GRK2P25098 689 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 LRPAP1P30533 357 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 GNL1P36915 607 aaPredicted RBP11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 MAGEA6P43360 314 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 RAB15P59190 212 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 TMEM62Q0P6H9 643 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 CNGA3Q16281 694 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 SOWAHAQ2M3V2 549 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 FASTKD1Q53R41 847 aaKnown RBP11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 FSCBQ5H9T9 825 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 MBLAC2Q68D91 279 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 PMF1Q6P1K2 205 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 CYS1Q717R9 158 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 ERI1Q8IV48 349 aaKnown RBP11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 DEFB107AQ8IZN7 70 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 ZBTB8BQ8NAP8 495 aaPredicted RBP11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 TRPC4APQ8TEL6 797 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 FAF2Q96CS3 445 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 CFAP36Q96G28 342 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 SERPINI1Q99574 410 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 SLC38A7Q9NVC3 462 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 VPS28Q9UK41 221 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 CNOT11Q9UKZ1 510 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms