RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 APOBEC3FQ8IUX4 373 aaKnown RBP9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 C4orf19Q8IY42 314 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 FNDC5Q8NAU1 212 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 B3GALNT2Q8NCR0 500 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 SETD9Q8NE22 299 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 FAR1Q8WVX9 515 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 RCN3Q96D15 328 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 ACOX2Q99424 681 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 FGFBP2Q9BYJ0 223 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 AVENQ9NQS1 362 aaPredicted RBP9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 PRDM5Q9NQX1 630 aaPredicted RBP9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 ZSCAN32Q9NX65 697 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 RWDD3Q9Y3V2 267 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 LTFP02788 710 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 IL6P05231 212 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 CXCL8P10145 99 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 GP5P40197 560 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 CRADDP78560 199 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 DPYSL3Q14195 570 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 NPNTQ6UXI9 565 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 VN1R5Q7Z5H4 357 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 HS6ST3Q8IZP7 471 aa9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 DDX4Q9NQI0 724 aaKnown RBP9.93□□□□□ -0.82
CTDSPL2-201ENST00000260327 ANXA9O76027 345 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 RGS20O76081 388 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 NADKO95544 446 aaPredicted RBP9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 JCHAINP01591 159 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 RFWD3Q6PCD5 774 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 SLCO6A1Q86UG4 719 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 GALNT15Q8N3T1 639 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 ZHX1-C8orf76Q96EF9 292 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 CATSPERBQ9H7T0 1116 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 XPNPEP3Q9NQH7 507 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 TUBGCP4Q9UGJ1 667 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 ASB14A6NK59 587 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 CD4P01730 458 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 ACO1P21399 889 aaKnown RBP9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 RPL14P50914 215 aaKnown RBP9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 GRTP1Q5TC63 336 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 HPS6Q86YV9 775 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 HIPK1Q86Z02 1210 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 EPHX4Q8IUS5 362 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 LRRC49Q8IUZ0 686 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 LRRN4Q8WUT4 740 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 SPATA31A1Q5TZJ5 1347 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 CASZ1Q86V15 1759 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 DYNC1LI2O43237 492 aaPredicted RBP9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 CCNKO75909 580 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 RBP1P09455 135 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 ERVK-10P10266 1014 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 PSME3P61289 254 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 C6orf183Q5T699 404 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 TRIM62Q9BVG3 475 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 NMRAL1Q9HBL8 299 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 MTSS1O43312 755 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 SUPT20HL2P0C7V6 817 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 STAG3L1P0CL83 205 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 RBL1P28749 1068 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 FCHO2Q0JRZ9 810 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 FSTL1Q12841 308 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 FNBP1LQ5T0N5 605 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 MPZL3Q6UWV2 235 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 C1orf186Q6ZWK4 172 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 CLNKQ7Z7G1 428 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 KCNMB4Q86W47 210 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 ELMO1Q92556 727 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 APBB2Q92870 758 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 OLFM1Q99784 485 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 OSBPL11Q9BXB4 747 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 C12orf65Q9H3J6 166 aaKnown RBP9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 ZNRF3Q9ULT6 936 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 TRIM17Q9Y577 477 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 FRMPD4Q14CM0 1322 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 BTNL10A8MVZ5 291 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 PSMD12O00232 456 aaPredicted RBP9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 SPTLC1O15269 473 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 MIPP30301 263 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 GCNT1Q02742 428 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 GRIK5Q16478 980 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 SV2CQ496J9 727 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 PAGE2BQ5JRK9 111 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 ANKS3Q6ZW76 656 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 WDR49Q8IV35 697 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 SLC25A23Q9BV35 468 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 ETNK2Q9NVF9 386 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 WASF2Q9Y6W5 498 aa9.92□□□□□ -0.82
CTDSPL2-201ENST00000260327 HBP1O60381 514 aa9.91□□□□□ -0.82
CTDSPL2-201ENST00000260327 VTNP04004 478 aa9.91□□□□□ -0.82
CTDSPL2-201ENST00000260327 ATP5BP06576 529 aaKnown RBP9.91□□□□□ -0.82
CTDSPL2-201ENST00000260327 ABCB1P08183 1280 aaPredicted RBP9.91□□□□□ -0.82
CTDSPL2-201ENST00000260327 PCNAP12004 261 aa9.91□□□□□ -0.82
CTDSPL2-201ENST00000260327 VCLP18206 1134 aa9.91□□□□□ -0.82
CTDSPL2-201ENST00000260327 DENND5AQ6IQ26 1287 aa9.91□□□□□ -0.82
CTDSPL2-201ENST00000260327 PAGE2Q7Z2X7 111 aa9.91□□□□□ -0.82
CTDSPL2-201ENST00000260327 FAM126BQ8IXS8 530 aa9.91□□□□□ -0.82
CTDSPL2-201ENST00000260327 KATNAL2Q8IYT4 538 aa9.91□□□□□ -0.82
CTDSPL2-201ENST00000260327 CACTIN-AS1Q8N1I8 211 aa9.91□□□□□ -0.82
CTDSPL2-201ENST00000260327 CAMKK1Q8N5S9 505 aa9.91□□□□□ -0.82
CTDSPL2-201ENST00000260327 GMCL1P1Q8NEA9 526 aa9.91□□□□□ -0.82
CTDSPL2-201ENST00000260327 TADA1Q96BN2 335 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms