RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 PLLPQ9Y342 182 aa9.41□□□□□ -0.9
RPA1-201ENST00000254719 TXNDC9O14530 226 aa9.41□□□□□ -0.9
RPA1-201ENST00000254719 EPHX2P34913 555 aa9.41□□□□□ -0.9
RPA1-201ENST00000254719 AP2B1P63010 937 aa9.41□□□□□ -0.9
RPA1-201ENST00000254719 CLEC14AQ86T13 490 aa9.41□□□□□ -0.9
RPA1-201ENST00000254719 MTDHQ86UE4 582 aaKnown RBP9.41□□□□□ -0.9
RPA1-201ENST00000254719 LRRTM3Q86VH5 581 aa9.41□□□□□ -0.9
RPA1-201ENST00000254719 ZDHHC17Q8IUH5 632 aa9.41□□□□□ -0.9
RPA1-201ENST00000254719 ENDOVQ8N8Q3 282 aaKnown RBP9.41□□□□□ -0.9
RPA1-201ENST00000254719 TMEM209Q96SK2 561 aa9.41□□□□□ -0.9
RPA1-201ENST00000254719 EPAS1Q99814 870 aa9.41□□□□□ -0.9
RPA1-201ENST00000254719 C1QTNF1Q9BXJ1 281 aa9.41□□□□□ -0.9
RPA1-201ENST00000254719 SLC38A7Q9NVC3 462 aa9.41□□□□□ -0.9
RPA1-201ENST00000254719 KLF11O14901 512 aa9.41□□□□□ -0.9
RPA1-201ENST00000254719 KCNN4O15554 427 aa9.41□□□□□ -0.9
RPA1-201ENST00000254719 KLHL2O95198 593 aa9.41□□□□□ -0.9
RPA1-201ENST00000254719 TPD52P55327 224 aaPredicted RBP9.41□□□□□ -0.9
RPA1-201ENST00000254719 SNAPC2Q13487 334 aa9.41□□□□□ -0.9
RPA1-201ENST00000254719 LAMB3Q13751 1172 aa9.41□□□□□ -0.9
RPA1-201ENST00000254719 SNX17Q15036 470 aa9.41□□□□□ -0.9
RPA1-201ENST00000254719 MMEL1Q495T6 779 aa9.41□□□□□ -0.9
RPA1-201ENST00000254719 TEDDM1Q5T9Z0 273 aa9.41□□□□□ -0.9
RPA1-201ENST00000254719 FOXB2Q5VYV0 432 aa9.41□□□□□ -0.9
RPA1-201ENST00000254719 HMGCLL1Q8TB92 370 aa9.41□□□□□ -0.9
RPA1-201ENST00000254719 AZIN2Q96A70 460 aa9.41□□□□□ -0.9
RPA1-201ENST00000254719 TTC1Q99614 292 aa9.41□□□□□ -0.9
RPA1-201ENST00000254719 IQCA1LA6NCM1 817 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 BGNP21810 368 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 SV2CQ496J9 727 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 MBLAC2Q68D91 279 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 CCSAPQ6IQ19 270 aaPredicted RBP9.4□□□□□ -0.9
RPA1-201ENST00000254719 DENND5AQ6IQ26 1287 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 ZNF683Q8IZ20 524 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 TEX9Q8N6V9 391 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 CNTD1Q8N815 330 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 PIP4K2CQ8TBX8 421 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 ERP27Q96DN0 273 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 ZNF670Q9BS34 389 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 NMUR2Q9GZQ4 415 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 FAM49AQ9H0Q0 323 aaPredicted RBP9.4□□□□□ -0.9
RPA1-201ENST00000254719 FAM124BQ9H5Z6 455 aaPredicted RBP9.4□□□□□ -0.9
RPA1-201ENST00000254719 VTA1Q9NP79 307 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 TAS2R1Q9NYW7 299 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 DENND4CQ5VZ89 1909 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 SYNJ2BP-COX16A0A087WUM0 186 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 YJEFN3A6XGL0 299 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.4□□□□□ -0.9
RPA1-201ENST00000254719 E7ENQ6 273 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 AMPD1P23109 780 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 CYP2F1P24903 491 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 ZBTB17Q13105 803 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 PDE1CQ14123 709 aaPredicted RBP9.4□□□□□ -0.9
RPA1-201ENST00000254719 GPNMBQ14956 572 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 PCLAFQ15004 111 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 ARHGEF6Q15052 776 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 LRRC36Q1X8D7 754 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 PPM1JQ5JR12 505 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 SPDYAQ5MJ70 313 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 TSTD2Q5T7W7 516 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 ARHGAP36Q6ZRI8 547 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 USP50Q70EL3 339 aaPredicted RBP9.4□□□□□ -0.9
RPA1-201ENST00000254719 ARHGAP18Q8N392 663 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 SLC2A14Q8TDB8 520 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 OSER1Q9NX31 292 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 COX16Q9P0S2 106 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 UBQLN1Q9UMX0 589 aaKnown RBP9.4□□□□□ -0.9
RPA1-201ENST00000254719 SMNDC1O75940 238 aaKnown RBP eCLIP9.4□□□□□ -0.9
RPA1-201ENST00000254719 TIAL1Q01085 375 aaKnown RBP eCLIP9.4□□□□□ -0.9
RPA1-201ENST00000254719 TSPY1Q01534 308 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 PTK7Q13308 1070 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 MAPRE2Q15555 327 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.4□□□□□ -0.9
RPA1-201ENST00000254719 ERLEC1Q96DZ1 483 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 MYEOVQ96EZ4 313 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 LRGUKQ96M69 825 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 TINF2Q9BSI4 451 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 SLC45A1Q9Y2W3 748 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 SH3BP1Q9Y3L3 701 aa9.4□□□□□ -0.9
RPA1-201ENST00000254719 PLXNB3Q9ULL4 1909 aa9.4□□□□□ -0.91
RPA1-201ENST00000254719 VNN2O95498 520 aa9.4□□□□□ -0.91
RPA1-201ENST00000254719 JUNP05412 331 aaKnown RBP9.4□□□□□ -0.91
RPA1-201ENST00000254719 APOA4P06727 396 aa9.4□□□□□ -0.91
RPA1-201ENST00000254719 UBTFL6P0CB48 400 aaPredicted RBP9.4□□□□□ -0.91
RPA1-201ENST00000254719 TYK2P29597 1187 aa9.4□□□□□ -0.91
RPA1-201ENST00000254719 STX3Q13277 289 aa9.4□□□□□ -0.91
RPA1-201ENST00000254719 ART3Q13508 389 aa9.4□□□□□ -0.91
RPA1-201ENST00000254719 KCNT2Q6UVM3 1135 aa9.4□□□□□ -0.91
RPA1-201ENST00000254719 CYS1Q717R9 158 aa9.4□□□□□ -0.91
RPA1-201ENST00000254719 SETD3Q86TU7 594 aaPredicted RBP9.4□□□□□ -0.91
RPA1-201ENST00000254719 ANKRD52Q8NB46 1076 aa9.4□□□□□ -0.91
RPA1-201ENST00000254719 APPL2Q8NEU8 664 aa9.4□□□□□ -0.91
RPA1-201ENST00000254719 MAPK15Q8TD08 544 aa9.4□□□□□ -0.91
RPA1-201ENST00000254719 LRRC39Q96DD0 335 aa9.4□□□□□ -0.91
RPA1-201ENST00000254719 TSC22D3Q99576 134 aa9.4□□□□□ -0.91
RPA1-201ENST00000254719 VPS11Q9H270 941 aa9.4□□□□□ -0.91
RPA1-201ENST00000254719 SUDS3Q9H7L9 328 aaPredicted RBP9.4□□□□□ -0.91
RPA1-201ENST00000254719 AGO3Q9H9G7 860 aaKnown RBP9.4□□□□□ -0.91
RPA1-201ENST00000254719 ZFATQ9P243 1243 aa9.4□□□□□ -0.91
RPA1-201ENST00000254719 ZNF212Q9UDV6 495 aa9.4□□□□□ -0.91
RPA1-201ENST00000254719 ZNF180Q9UJW8 692 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms