RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 CSGALNACT1Q8TDX6 532 aa19.31■□□□□ 0.68
PTPRE-201ENST00000254667 SENP6Q9GZR1 1112 aaPredicted RBP19.31■□□□□ 0.68
PTPRE-201ENST00000254667 MID1IP1Q9NPA3 183 aa19.31■□□□□ 0.68
PTPRE-201ENST00000254667 CATSPERZQ9NTU4 200 aa19.31■□□□□ 0.68
PTPRE-201ENST00000254667 KLHL28Q9NXS3 571 aa19.31■□□□□ 0.68
PTPRE-201ENST00000254667 ZSCAN5CA6NGD5 496 aaPredicted RBP19.31■□□□□ 0.68
PTPRE-201ENST00000254667 OPLAHO14841 1288 aa19.31■□□□□ 0.68
PTPRE-201ENST00000254667 NUMBP49757 651 aa19.31■□□□□ 0.68
PTPRE-201ENST00000254667 RAD23AP54725 363 aa19.31■□□□□ 0.68
PTPRE-201ENST00000254667 FAAP100Q0VG06 881 aa19.31■□□□□ 0.68
PTPRE-201ENST00000254667 PKN2Q16513 984 aaKnown RBP19.31■□□□□ 0.68
PTPRE-201ENST00000254667 C15orf59Q2T9L4 293 aaPredicted RBP19.31■□□□□ 0.68
PTPRE-201ENST00000254667 NEPROQ6NW34 567 aa19.31■□□□□ 0.68
PTPRE-201ENST00000254667 DTNBP1Q96EV8 351 aa19.31■□□□□ 0.68
PTPRE-201ENST00000254667 NLNQ9BYT8 704 aa19.31■□□□□ 0.68
PTPRE-201ENST00000254667 ARMC7Q9H6L4 198 aa19.31■□□□□ 0.68
PTPRE-201ENST00000254667 RPS6KB2Q9UBS0 482 aa19.31■□□□□ 0.68
PTPRE-201ENST00000254667 MRC1P22897 1456 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 XPO1O14980 1071 aaKnown RBP19.3■□□□□ 0.68
PTPRE-201ENST00000254667 UBTFL6P0CB48 400 aaPredicted RBP19.3■□□□□ 0.68
PTPRE-201ENST00000254667 CHKAP35790 457 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 BOP1Q14137 746 aaKnown RBP19.3■□□□□ 0.68
PTPRE-201ENST00000254667 PLEKHM3Q6ZWE6 761 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 SLC44A2Q8IWA5 706 aaPredicted RBP19.3■□□□□ 0.68
PTPRE-201ENST00000254667 MAGEC3Q8TD91 643 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 RNF157Q96PX1 679 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 AP4S1Q9Y587 144 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 PCDHAC2Q9Y5I4 1007 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 CAMTA1Q9Y6Y1 1673 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 SMIM22K7EJ46 135 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 SNHG28P0DPA3 235 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 PCYT1AP49585 367 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 BLVRAP53004 296 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 FMO1Q01740 532 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 ALDH6A1Q02252 535 aaKnown RBP19.3■□□□□ 0.68
PTPRE-201ENST00000254667 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.3■□□□□ 0.68
PTPRE-201ENST00000254667 FNDC3BQ53EP0 1204 aaKnown RBP19.3■□□□□ 0.68
PTPRE-201ENST00000254667 IYDQ6PHW0 289 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 MILR1Q7Z6M3 343 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 ZSWIM2Q8NEG5 633 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 SKA1Q96BD8 255 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 MAN1C1Q9NR34 630 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 TAS2R14Q9NYV8 317 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 LIASO43766 372 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 PSMC3P17980 439 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 ATP4AP20648 1035 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 DGKAP23743 735 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 NUP107P57740 925 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 TBL3Q12788 808 aaKnown RBP19.3■□□□□ 0.68
PTPRE-201ENST00000254667 C10orf53Q8N6V4 93 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 BTN2A2Q8WVV5 523 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 ZYG11BQ9C0D3 744 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 CAPN10Q9HC96 672 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 ADAM28Q9UKQ2 775 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 H3BQF6 201 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 ZBTB14O43829 449 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 PGK1P00558 417 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 HPGDP15428 266 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 ZC3H12AQ5D1E8 599 aaKnown RBP19.3■□□□□ 0.68
PTPRE-201ENST00000254667 ZNF786Q8N393 782 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 METTL6Q8TCB7 284 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 MED8Q96G25 268 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 SNRNP25Q9BV90 132 aaKnown RBP19.3■□□□□ 0.68
PTPRE-201ENST00000254667 NDUFAF1Q9Y375 327 aa19.3■□□□□ 0.68
PTPRE-201ENST00000254667 ZW10O43264 779 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 ITGB6P18564 788 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 HNRNPH3P31942 346 aaKnown RBP19.29■□□□□ 0.68
PTPRE-201ENST00000254667 RXRGP48443 463 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 SUSD6Q92537 303 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 CNBD2Q96M20 576 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 KRT84Q9NSB2 600 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 IL1RAPL1Q9NZN1 696 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 CROTQ9UKG9 612 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 FARP2O94887 1054 aaPredicted RBP19.29■□□□□ 0.68
PTPRE-201ENST00000254667 UBOX5O94941 541 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 AIF1P55008 147 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 SNRPD1P62314 119 aaKnown RBP19.29■□□□□ 0.68
PTPRE-201ENST00000254667 NOMO3P69849 1222 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 USP41Q3LFD5 358 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 PRAMEF19Q5SWL8 479 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 HDAC7Q8WUI4 952 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 BAP1Q92560 729 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 VAV3Q9UKW4 847 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 ST3GAL5Q9UNP4 418 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 C15orf38-AP3S2A0A0A6YYH1 394 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 SMIM35A0A1B0GVV1 85 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 MTA2O94776 668 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 ZNF682O95780 498 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 ITGAVP06756 1048 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 ARPINQ7Z6K5 226 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 ALLCQ8N6M5 410 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 SPATA20Q8TB22 786 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 MYLPFQ96A32 169 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 OXNAD1Q96HP4 312 aaPredicted RBP19.29■□□□□ 0.68
PTPRE-201ENST00000254667 LRRC19Q9H756 370 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 NRDE2Q9H7Z3 1164 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 AP3M1Q9Y2T2 418 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 PSMD12O00232 456 aaPredicted RBP19.29■□□□□ 0.68
PTPRE-201ENST00000254667 BTN3A1O00481 513 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 KPNA3O00505 521 aaPredicted RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms