RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 USP13Q92995 863 aaPredicted RBP18.86■□□□□ 0.61
LRP3-201ENST00000253193 SNX27Q96L92 541 aa18.86■□□□□ 0.61
LRP3-201ENST00000253193 ECSITQ9BQ95 431 aa18.86■□□□□ 0.61
LRP3-201ENST00000253193 ATXN3LQ9H3M9 355 aa18.86■□□□□ 0.61
LRP3-201ENST00000253193 WDCPQ9H6R7 721 aa18.86■□□□□ 0.61
LRP3-201ENST00000253193 NMRAL1Q9HBL8 299 aa18.86■□□□□ 0.61
LRP3-201ENST00000253193 TCF7L2Q9NQB0 619 aa18.86■□□□□ 0.61
LRP3-201ENST00000253193 MOCS1Q9NZB8 636 aa18.86■□□□□ 0.61
LRP3-201ENST00000253193 PLA2G4CQ9UP65 541 aa18.86■□□□□ 0.61
LRP3-201ENST00000253193 FKBP6O75344 327 aa18.85■□□□□ 0.61
LRP3-201ENST00000253193 RAG1P15918 1043 aa18.85■□□□□ 0.61
LRP3-201ENST00000253193 EPHA3P29320 983 aa18.85■□□□□ 0.61
LRP3-201ENST00000253193 POU6F1Q14863 301 aa18.85■□□□□ 0.61
LRP3-201ENST00000253193 TEX44Q53QW1 395 aa18.85■□□□□ 0.61
LRP3-201ENST00000253193 HFE2Q6ZVN8 426 aa18.85■□□□□ 0.61
LRP3-201ENST00000253193 STRADAQ7RTN6 431 aa18.85■□□□□ 0.61
LRP3-201ENST00000253193 PIP4K2CQ8TBX8 421 aa18.85■□□□□ 0.61
LRP3-201ENST00000253193 WNT8BQ93098 351 aa18.85■□□□□ 0.61
LRP3-201ENST00000253193 TMA16Q96EY4 203 aaKnown RBP18.85■□□□□ 0.61
LRP3-201ENST00000253193 LRGUKQ96M69 825 aa18.85■□□□□ 0.61
LRP3-201ENST00000253193 RUVBL2Q9Y230 463 aaKnown RBP18.85■□□□□ 0.61
LRP3-201ENST00000253193 FGF3P11487 239 aaPredicted RBP18.85■□□□□ 0.61
LRP3-201ENST00000253193 ETS2P15036 469 aa18.85■□□□□ 0.61
LRP3-201ENST00000253193 CCNFP41002 786 aa18.85■□□□□ 0.61
LRP3-201ENST00000253193 NAGLUP54802 743 aa18.85■□□□□ 0.61
LRP3-201ENST00000253193 IRF9Q00978 393 aa18.85■□□□□ 0.61
LRP3-201ENST00000253193 IL31Q6EBC2 164 aa18.85■□□□□ 0.61
LRP3-201ENST00000253193 FSTL4Q6MZW2 842 aa18.85■□□□□ 0.61
LRP3-201ENST00000253193 ACAD11Q709F0 780 aa18.85■□□□□ 0.61
LRP3-201ENST00000253193 PHTF2Q8N3S3 785 aa18.85■□□□□ 0.61
LRP3-201ENST00000253193 GDPD5Q8WTR4 605 aa18.85■□□□□ 0.61
LRP3-201ENST00000253193 ZFP42Q96MM3 310 aa18.85■□□□□ 0.61
LRP3-201ENST00000253193 CCDC106Q9BWC9 280 aa18.85■□□□□ 0.61
LRP3-201ENST00000253193 DDX43Q9NXZ2 648 aaKnown RBP18.85■□□□□ 0.61
LRP3-201ENST00000253193 FZD10Q9ULW2 581 aa18.85■□□□□ 0.61
LRP3-201ENST00000253193 SPTLC1O15269 473 aa18.85■□□□□ 0.61
LRP3-201ENST00000253193 ZBTB24O43167 697 aaPredicted RBP18.85■□□□□ 0.61
LRP3-201ENST00000253193 TRIM13O60858 407 aa18.85■□□□□ 0.61
LRP3-201ENST00000253193 GABBR2O75899 941 aa18.85■□□□□ 0.61
LRP3-201ENST00000253193 MARK2Q7KZI7 788 aaKnown RBP18.85■□□□□ 0.61
LRP3-201ENST00000253193 PSTKQ8IV42 348 aaKnown RBP18.85■□□□□ 0.61
LRP3-201ENST00000253193 ICA1LQ8NDH6 482 aa18.85■□□□□ 0.61
LRP3-201ENST00000253193 OXCT2Q9BYC2 517 aaPredicted RBP18.85■□□□□ 0.61
LRP3-201ENST00000253193 MTMR10Q9NXD2 777 aa18.85■□□□□ 0.61
LRP3-201ENST00000253193 SSX2IPQ9Y2D8 614 aa18.85■□□□□ 0.61
LRP3-201ENST00000253193 F8W8V4 182 aa18.84■□□□□ 0.61
LRP3-201ENST00000253193 TRPA1O75762 1119 aa18.84■□□□□ 0.61
LRP3-201ENST00000253193 NPR3P17342 541 aa18.84■□□□□ 0.61
LRP3-201ENST00000253193 PTPN1P18031 435 aaKnown RBP18.84■□□□□ 0.61
LRP3-201ENST00000253193 TKTP29401 623 aaKnown RBP18.84■□□□□ 0.61
LRP3-201ENST00000253193 PCLAFQ15004 111 aa18.84■□□□□ 0.61
LRP3-201ENST00000253193 ARMC3Q5W041 872 aa18.84■□□□□ 0.61
LRP3-201ENST00000253193 ITPRIPL1Q6GPH6 555 aa18.84■□□□□ 0.61
LRP3-201ENST00000253193 PLD6Q8N2A8 252 aaKnown RBP18.84■□□□□ 0.61
LRP3-201ENST00000253193 URGCPQ8TCY9 931 aa18.84■□□□□ 0.61
LRP3-201ENST00000253193 EPAS1Q99814 870 aa18.84■□□□□ 0.61
LRP3-201ENST00000253193 VTA1Q9NP79 307 aa18.84■□□□□ 0.61
LRP3-201ENST00000253193 CAPN14A8MX76 684 aa18.84■□□□□ 0.61
LRP3-201ENST00000253193 C2P06681 752 aa18.84■□□□□ 0.61
LRP3-201ENST00000253193 NFKB1P19838 968 aa18.84■□□□□ 0.61
LRP3-201ENST00000253193 SPANXN3Q5MJ09 141 aa18.84■□□□□ 0.61
LRP3-201ENST00000253193 CXorf38Q8TB03 319 aa18.84■□□□□ 0.61
LRP3-201ENST00000253193 LENG1Q96BZ8 264 aaPredicted RBP18.84■□□□□ 0.61
LRP3-201ENST00000253193 TUBGCP5Q96RT8 1024 aa18.84■□□□□ 0.61
LRP3-201ENST00000253193 PLAC1Q9HBJ0 212 aa18.84■□□□□ 0.61
LRP3-201ENST00000253193 PMPCBO75439 489 aa18.84■□□□□ 0.61
LRP3-201ENST00000253193 TOMM70O94826 608 aa18.84■□□□□ 0.61
LRP3-201ENST00000253193 CTSHP09668 335 aa18.84■□□□□ 0.61
LRP3-201ENST00000253193 PNPLA4P41247 253 aa18.84■□□□□ 0.61
LRP3-201ENST00000253193 RAP1GDS1P52306 607 aa18.84■□□□□ 0.61
LRP3-201ENST00000253193 MAP3K21Q5TCX8 1036 aa18.84■□□□□ 0.61
LRP3-201ENST00000253193 SNX32Q86XE0 403 aa18.84■□□□□ 0.61
LRP3-201ENST00000253193 GALNT15Q8N3T1 639 aa18.84■□□□□ 0.61
LRP3-201ENST00000253193 RAB3IL1Q8TBN0 382 aa18.84■□□□□ 0.61
LRP3-201ENST00000253193 CATSPER2Q96P56 530 aa18.84■□□□□ 0.61
LRP3-201ENST00000253193 SERPINI1Q99574 410 aa18.84■□□□□ 0.61
LRP3-201ENST00000253193 C16orf70Q9BSU1 422 aa18.84■□□□□ 0.61
LRP3-201ENST00000253193 PIGVQ9NUD9 493 aa18.84■□□□□ 0.61
LRP3-201ENST00000253193 ADA2Q9NZK5 511 aa18.84■□□□□ 0.61
LRP3-201ENST00000253193 PDHXO00330 501 aa18.83■□□□□ 0.61
LRP3-201ENST00000253193 BEST1O76090 585 aa18.83■□□□□ 0.61
LRP3-201ENST00000253193 MLNP12872 115 aa18.83■□□□□ 0.61
LRP3-201ENST00000253193 PKNOX1P55347 436 aa18.83■□□□□ 0.61
LRP3-201ENST00000253193 KCNK16Q96T55 309 aa18.83■□□□□ 0.61
LRP3-201ENST00000253193 SNNO75324 88 aaPredicted RBP18.83■□□□□ 0.6
LRP3-201ENST00000253193 ROR2Q01974 943 aaKnown RBP18.83■□□□□ 0.6
LRP3-201ENST00000253193 PCSK7Q16549 785 aa18.83■□□□□ 0.6
LRP3-201ENST00000253193 CCDC153Q494R4 210 aa18.83■□□□□ 0.6
LRP3-201ENST00000253193 SPATA24Q86W54 205 aa18.83■□□□□ 0.6
LRP3-201ENST00000253193 OMDQ99983 421 aa18.83■□□□□ 0.6
LRP3-201ENST00000253193 FSD1LQ9BXM9 530 aa18.83■□□□□ 0.6
LRP3-201ENST00000253193 ETAA1Q9NY74 926 aa18.83■□□□□ 0.6
LRP3-201ENST00000253193 RRN3P2A6NIE6 340 aa18.83■□□□□ 0.6
LRP3-201ENST00000253193 YBX3P16989 372 aaKnown RBP eCLIP18.83■□□□□ 0.6
LRP3-201ENST00000253193 SMPD1P17405 629 aa18.83■□□□□ 0.6
LRP3-201ENST00000253193 ARHGAP17Q68EM7 881 aa18.83■□□□□ 0.6
LRP3-201ENST00000253193 DHDDSQ86SQ9 333 aa18.83■□□□□ 0.6
LRP3-201ENST00000253193 GALNT4Q8N4A0 578 aa18.83■□□□□ 0.6
LRP3-201ENST00000253193 GATA6Q92908 595 aa18.83■□□□□ 0.6
LRP3-201ENST00000253193 IFT43Q96FT9 208 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms