RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 ERFP50548 548 aa16.13■□□□□ 0.17
LRFN1-201ENST00000248668 MGAT3Q09327 533 aa16.13■□□□□ 0.17
LRFN1-201ENST00000248668 SEMA3BQ13214 749 aa16.13■□□□□ 0.17
LRFN1-201ENST00000248668 HSP90AA5PQ58FG0 334 aa16.13■□□□□ 0.17
LRFN1-201ENST00000248668 INTS6LQ5JSJ4 861 aaKnown RBP16.13■□□□□ 0.17
LRFN1-201ENST00000248668 KCNV2Q8TDN2 545 aa16.13■□□□□ 0.17
LRFN1-201ENST00000248668 GPR152Q8TDT2 470 aa16.13■□□□□ 0.17
LRFN1-201ENST00000248668 NMUR2Q9GZQ4 415 aa16.13■□□□□ 0.17
LRFN1-201ENST00000248668 PTCH2Q9Y6C5 1203 aa16.13■□□□□ 0.17
LRFN1-201ENST00000248668 ITGA2BP08514 1039 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 NIPAL4Q0D2K0 466 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 IRF5Q13568 498 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 DLG2Q15700 870 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 ZNF778Q96MU6 729 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 MLPHQ9BV36 600 aaPredicted RBP16.12■□□□□ 0.17
LRFN1-201ENST00000248668 DMAP1Q9NPF5 467 aaPredicted RBP16.12■□□□□ 0.17
LRFN1-201ENST00000248668 CHST12Q9NRB3 414 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 CHRAC1Q9NRG0 131 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 ABI2Q9NYB9 513 aaPredicted RBP16.12■□□□□ 0.17
LRFN1-201ENST00000248668 ZNF236Q9UL36 1845 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.12■□□□□ 0.17
LRFN1-201ENST00000248668 ARHGAP42A6NI28 874 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 H0Y3Z8 333 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 TOMM70O94826 608 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 POLBP06746 335 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 PRKAR2AP13861 404 aaKnown RBP16.12■□□□□ 0.17
LRFN1-201ENST00000248668 TYK2P29597 1187 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 CCNFP41002 786 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 RCN2Q14257 317 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 FASTKD1Q53R41 847 aaKnown RBP16.12■□□□□ 0.17
LRFN1-201ENST00000248668 PDZD4Q76G19 769 aaPredicted RBP16.12■□□□□ 0.17
LRFN1-201ENST00000248668 MTBPQ96DY7 904 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 CERS2Q96G23 380 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 SEPT4O43236 478 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 ITM2AO43736 263 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 SLC10A3P09131 477 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 GARSP41250 739 aaKnown RBP16.12■□□□□ 0.17
LRFN1-201ENST00000248668 SERPINB9P50453 376 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 FCGRTP55899 365 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 CDK16Q00536 496 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 STEAP4Q687X5 459 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 CD300LGQ6UXG3 332 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 ZNF280BQ86YH2 543 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 SPNS2Q8IVW8 549 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 TNS4Q8IZW8 715 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 NTAN1Q96AB6 310 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 LRMDAQ9H2I8 198 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 NDFIP2Q9NV92 336 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 IGSF9Q9P2J2 1179 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 PPARGC1AQ9UBK2 798 aaKnown RBP16.12■□□□□ 0.17
LRFN1-201ENST00000248668 BPTFQ12830 3046 aa16.12■□□□□ 0.17
LRFN1-201ENST00000248668 MT-CYBP00156 380 aaPredicted RBP16.11■□□□□ 0.17
LRFN1-201ENST00000248668 IGHA2P01877 340 aa16.11■□□□□ 0.17
LRFN1-201ENST00000248668 GSTA2P09210 222 aa16.11■□□□□ 0.17
LRFN1-201ENST00000248668 MLNP12872 115 aa16.11■□□□□ 0.17
LRFN1-201ENST00000248668 RPL9P32969 192 aaKnown RBP16.11■□□□□ 0.17
LRFN1-201ENST00000248668 AQP5P55064 265 aa16.11■□□□□ 0.17
LRFN1-201ENST00000248668 CTC1Q2NKJ3 1217 aa16.11■□□□□ 0.17
LRFN1-201ENST00000248668 RSPH1Q8WYR4 309 aa16.11■□□□□ 0.17
LRFN1-201ENST00000248668 ZNF570Q96NI8 536 aa16.11■□□□□ 0.17
LRFN1-201ENST00000248668 ATXN3LQ9H3M9 355 aa16.11■□□□□ 0.17
LRFN1-201ENST00000248668 LAMA3Q16787 3333 aa16.11■□□□□ 0.17
LRFN1-201ENST00000248668 A0A0U1RQF3 1178 aa16.11■□□□□ 0.17
LRFN1-201ENST00000248668 FCHO1O14526 889 aa16.11■□□□□ 0.17
LRFN1-201ENST00000248668 ADAMTS4O75173 837 aa16.11■□□□□ 0.17
LRFN1-201ENST00000248668 BPGMP07738 259 aa16.11■□□□□ 0.17
LRFN1-201ENST00000248668 CRHR1P34998 444 aa16.11■□□□□ 0.17
LRFN1-201ENST00000248668 CXCR3P49682 368 aa16.11■□□□□ 0.17
LRFN1-201ENST00000248668 GPR15P49685 360 aa16.11■□□□□ 0.17
LRFN1-201ENST00000248668 PPIDQ08752 370 aaKnown RBP16.11■□□□□ 0.17
LRFN1-201ENST00000248668 STRA8Q7Z7C7 330 aa16.11■□□□□ 0.17
LRFN1-201ENST00000248668 MAB21L3Q8N8X9 362 aa16.11■□□□□ 0.17
LRFN1-201ENST00000248668 MOCOSQ96EN8 888 aa16.11■□□□□ 0.17
LRFN1-201ENST00000248668 RILPQ96NA2 401 aa16.11■□□□□ 0.17
LRFN1-201ENST00000248668 SLC9A7Q96T83 725 aa16.11■□□□□ 0.17
LRFN1-201ENST00000248668 EBF4Q9BQW3 602 aa16.11■□□□□ 0.17
LRFN1-201ENST00000248668 BFARQ9NZS9 450 aa16.11■□□□□ 0.17
LRFN1-201ENST00000248668 MPP6Q9NZW5 540 aa16.11■□□□□ 0.17
LRFN1-201ENST00000248668 EMCNQ9ULC0 261 aa16.11■□□□□ 0.17
LRFN1-201ENST00000248668 TRPM7Q96QT4 1865 aa16.11■□□□□ 0.17
LRFN1-201ENST00000248668 KPNA6O60684 536 aa16.1■□□□□ 0.17
LRFN1-201ENST00000248668 AP2A1O95782 977 aa16.1■□□□□ 0.17
LRFN1-201ENST00000248668 SKIV2L2P42285 1042 aaKnown RBP16.1■□□□□ 0.17
LRFN1-201ENST00000248668 RANBP1P43487 201 aa16.1■□□□□ 0.17
LRFN1-201ENST00000248668 SLC5A3P53794 718 aa16.1■□□□□ 0.17
LRFN1-201ENST00000248668 HSF5Q4G112 596 aaPredicted RBP16.1■□□□□ 0.17
LRFN1-201ENST00000248668 SLC39A12Q504Y0 691 aa16.1■□□□□ 0.17
LRFN1-201ENST00000248668 MARK2Q7KZI7 788 aaKnown RBP16.1■□□□□ 0.17
LRFN1-201ENST00000248668 MIPEPQ99797 713 aa16.1■□□□□ 0.17
LRFN1-201ENST00000248668 ACBD6Q9BR61 282 aa16.1■□□□□ 0.17
LRFN1-201ENST00000248668 C15orf41Q9Y2V0 281 aa16.1■□□□□ 0.17
LRFN1-201ENST00000248668 ALDH18A1P54886 795 aaKnown RBP16.1■□□□□ 0.17
LRFN1-201ENST00000248668 STX3Q13277 289 aa16.1■□□□□ 0.17
LRFN1-201ENST00000248668 BTBD8Q5XKL5 378 aa16.1■□□□□ 0.17
LRFN1-201ENST00000248668 ATG16L1Q676U5 607 aa16.1■□□□□ 0.17
LRFN1-201ENST00000248668 RFWD3Q6PCD5 774 aa16.1■□□□□ 0.17
LRFN1-201ENST00000248668 SPATA2LQ8IUW3 424 aaPredicted RBP16.1■□□□□ 0.17
LRFN1-201ENST00000248668 SMC1BQ8NDV3 1235 aa16.1■□□□□ 0.17
LRFN1-201ENST00000248668 FAM13CQ8NE31 585 aa16.1■□□□□ 0.17
LRFN1-201ENST00000248668 ACVR1CQ8NER5 493 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms