RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 PWWP2AQ96N64 755 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 LRRC3Q9BY71 257 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 STMN4Q9H169 189 aaPredicted RBP14.55□□□□□ -0.08
SDF2-201ENST00000247020 GBA3Q9H227 469 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 ZNF334Q9HCZ1 680 aaPredicted RBP14.55□□□□□ -0.08
SDF2-201ENST00000247020 ALG13Q9NP73 1137 aaKnown RBP14.55□□□□□ -0.08
SDF2-201ENST00000247020 GOLGA6AQ9NYA3 693 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 PCDH10Q9P2E7 1040 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 KLHL8Q9P2G9 620 aaPredicted RBP14.55□□□□□ -0.08
SDF2-201ENST00000247020 ZNF212Q9UDV6 495 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 FETUBQ9UGM5 382 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 STOML2Q9UJZ1 356 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 SOBPA7XYQ1 873 aa14.54□□□□□ -0.08
SDF2-201ENST00000247020 GOLGA8MH3BSY2 632 aa14.54□□□□□ -0.08
SDF2-201ENST00000247020 DFFAO00273 331 aa14.54□□□□□ -0.08
SDF2-201ENST00000247020 PSMD3O43242 534 aa14.54□□□□□ -0.08
SDF2-201ENST00000247020 MAFKO60675 156 aa14.54□□□□□ -0.08
SDF2-201ENST00000247020 SHBGP04278 402 aa14.54□□□□□ -0.08
SDF2-201ENST00000247020 KCNQ1P51787 676 aa14.54□□□□□ -0.08
SDF2-201ENST00000247020 CLCN4P51793 760 aa14.54□□□□□ -0.08
SDF2-201ENST00000247020 PARP15Q460N3 678 aa14.54□□□□□ -0.08
SDF2-201ENST00000247020 TTMPQ5BVD1 217 aa14.54□□□□□ -0.08
SDF2-201ENST00000247020 FNBP1LQ5T0N5 605 aa14.54□□□□□ -0.08
SDF2-201ENST00000247020 PLPP4Q5VZY2 271 aa14.54□□□□□ -0.08
SDF2-201ENST00000247020 NADSYN1Q6IA69 706 aa14.54□□□□□ -0.08
SDF2-201ENST00000247020 PID1Q7Z2X4 250 aa14.54□□□□□ -0.08
SDF2-201ENST00000247020 TMC8Q8IU68 726 aa14.54□□□□□ -0.08
SDF2-201ENST00000247020 CCDC33Q8N5R6 958 aa14.54□□□□□ -0.08
SDF2-201ENST00000247020 ZSCAN18Q8TBC5 510 aaPredicted RBP14.54□□□□□ -0.08
SDF2-201ENST00000247020 LRRN4Q8WUT4 740 aa14.54□□□□□ -0.08
SDF2-201ENST00000247020 MRPS31Q92665 395 aaKnown RBP14.54□□□□□ -0.08
SDF2-201ENST00000247020 ARL8AQ96BM9 186 aa14.54□□□□□ -0.08
SDF2-201ENST00000247020 CELF6Q96J87 481 aaKnown RBP14.54□□□□□ -0.08
SDF2-201ENST00000247020 C9orf72Q96LT7 481 aa14.54□□□□□ -0.08
SDF2-201ENST00000247020 TEKT5Q96M29 485 aa14.54□□□□□ -0.08
SDF2-201ENST00000247020 RPRD1AQ96P16 312 aaPredicted RBP14.54□□□□□ -0.08
SDF2-201ENST00000247020 GCNAQ96QF7 691 aa14.54□□□□□ -0.08
SDF2-201ENST00000247020 IL12RB2Q99665 862 aa14.54□□□□□ -0.08
SDF2-201ENST00000247020 SLC39A8Q9C0K1 460 aa14.54□□□□□ -0.08
SDF2-201ENST00000247020 DNAJC17Q9NVM6 304 aaKnown RBP14.54□□□□□ -0.08
SDF2-201ENST00000247020 MPP6Q9NZW5 540 aa14.54□□□□□ -0.08
SDF2-201ENST00000247020 SEPT10Q9P0V9 454 aa14.54□□□□□ -0.08
SDF2-201ENST00000247020 DPP7Q9UHL4 492 aa14.54□□□□□ -0.08
SDF2-201ENST00000247020 C2orf78A6NCI8 922 aa14.53□□□□□ -0.08
SDF2-201ENST00000247020 RASGRF2O14827 1237 aa14.53□□□□□ -0.08
SDF2-201ENST00000247020 CACNG3O60359 315 aa14.53□□□□□ -0.08
SDF2-201ENST00000247020 POU2F2P09086 479 aa14.53□□□□□ -0.08
SDF2-201ENST00000247020 GSTA2P09210 222 aa14.53□□□□□ -0.08
SDF2-201ENST00000247020 IFNAR2P48551 515 aa14.53□□□□□ -0.08
SDF2-201ENST00000247020 CDH4P55283 916 aa14.53□□□□□ -0.08
SDF2-201ENST00000247020 CBX1P83916 185 aa14.53□□□□□ -0.08
SDF2-201ENST00000247020 FAM133BQ5BKY9 247 aaKnown RBP14.53□□□□□ -0.08
SDF2-201ENST00000247020 EMC10Q5UCC4 262 aa14.53□□□□□ -0.08
SDF2-201ENST00000247020 CHST9Q7L1S5 443 aa14.53□□□□□ -0.08
SDF2-201ENST00000247020 MAML1Q92585 1016 aa14.53□□□□□ -0.08
SDF2-201ENST00000247020 IGSF8Q969P0 613 aa14.53□□□□□ -0.08
SDF2-201ENST00000247020 TGS1Q96RS0 853 aaKnown RBP14.53□□□□□ -0.08
SDF2-201ENST00000247020 C17orf80Q9BSJ5 609 aa14.53□□□□□ -0.08
SDF2-201ENST00000247020 RNF38Q9H0F5 515 aa14.53□□□□□ -0.08
SDF2-201ENST00000247020 LRRC4CQ9HCJ2 640 aa14.53□□□□□ -0.08
SDF2-201ENST00000247020 VPS18Q9P253 973 aa14.53□□□□□ -0.08
SDF2-201ENST00000247020 PCDHA11Q9Y5I1 949 aa14.53□□□□□ -0.08
SDF2-201ENST00000247020 TEX264Q9Y6I9 313 aa14.53□□□□□ -0.08
SDF2-201ENST00000247020 HIDE1A8MVS5 230 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 KCNK1O00180 336 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 AP3B1O00203 1094 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 SUN1O94901 812 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 AGTP01019 485 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 HNRNPA1P09651 372 aaKnown RBP eCLIP14.52□□□□□ -0.08
SDF2-201ENST00000247020 MBL2P11226 248 aaPredicted RBP14.52□□□□□ -0.08
SDF2-201ENST00000247020 CCNB1P14635 433 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 DNAJB1P25685 340 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 DDX6P26196 483 aaKnown RBP eCLIP14.52□□□□□ -0.08
SDF2-201ENST00000247020 PSMB4P28070 264 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 GABRR2P28476 465 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 ATP5DP30049 168 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 CORO1AP31146 461 aaKnown RBP14.52□□□□□ -0.08
SDF2-201ENST00000247020 LMAN1P49257 510 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 PAPOLAP51003 745 aaKnown RBP14.52□□□□□ -0.08
SDF2-201ENST00000247020 EPHA5P54756 1037 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 SLC7A9P82251 487 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 TNK2Q07912 1038 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 RASA2Q15283 850 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 BBS9Q3SYG4 887 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 ALFQ53S48 1182 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 PPM1LQ5SGD2 360 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 ADGRF1Q5T601 910 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 FAXCQ5TGI0 409 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 LRRC8BQ6P9F7 803 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 CAND1Q86VP6 1230 aaKnown RBP14.52□□□□□ -0.08
SDF2-201ENST00000247020 TDRPQ86YL5 185 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 TAB3Q8N5C8 712 aaPredicted RBP14.52□□□□□ -0.08
SDF2-201ENST00000247020 LEMD2Q8NC56 503 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 NETO2Q8NC67 525 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 FBXO36Q8NEA4 188 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 FAM76AQ8TAV0 307 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 ZFRQ96KR1 1074 aaKnown RBP14.52□□□□□ -0.08
SDF2-201ENST00000247020 NOL6Q9H6R4 1146 aaKnown RBP14.52□□□□□ -0.08
SDF2-201ENST00000247020 ASAH2Q9NR71 780 aa14.52□□□□□ -0.08
SDF2-201ENST00000247020 NDFIP2Q9NV92 336 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms