RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 PPFIBP2Q8ND30 876 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 ADAM32Q8TC27 787 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 PPP4R1Q8TF05 950 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 ZNF669Q96BR6 464 aaPredicted RBP14.73□□□□□ -0.05
HIF3A-202ENST00000244303 SLC2A13Q96QE2 648 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 CPNE1Q99829 537 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 ANLNQ9NQW6 1124 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 SNX15Q9NRS6 342 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 KRT82Q9NSB4 513 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 SOX13Q9UN79 622 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 NRP1O14786 923 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 AMHP03971 560 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 RALBP11234 206 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 SKIP12755 728 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 PTPN1P18031 435 aaKnown RBP14.72□□□□□ -0.05
HIF3A-202ENST00000244303 ERCC2P18074 760 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 IGFBP6P24592 240 aaPredicted RBP14.72□□□□□ -0.05
HIF3A-202ENST00000244303 PTPN3P26045 913 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 TUBP50607 506 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 TKTL1P51854 596 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 MAP3K7CLP57077 242 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 SLC25A3Q00325 362 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 BEX3Q00994 111 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 GRTP1Q5TC63 336 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 C1orf146Q5VVC0 180 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 TMEM154Q6P9G4 183 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 MYLK4Q86YV6 388 aaPredicted RBP14.72□□□□□ -0.05
HIF3A-202ENST00000244303 KBTBD2Q8IY47 623 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 DCLK2Q8N568 766 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 TOP6BLQ8N6T0 577 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 POU5F2Q8N7G0 328 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 SLC7A14Q8TBB6 771 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 SHKBP1Q8TBC3 707 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 UCMAQ8WVF2 138 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 TSC22D3Q99576 134 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 RBBP8Q99708 897 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 MED10Q9BTT4 135 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 IPPQ9Y573 584 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 I6L893 689 aaPredicted RBP14.72□□□□□ -0.05
HIF3A-202ENST00000244303 MAP3K7O43318 606 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 SIN3BO75182 1162 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 FYNP06241 537 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 CYP2B6P20813 491 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 GRK2P25098 689 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 IDH3AP50213 366 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 ABCE1P61221 599 aaKnown RBP14.72□□□□□ -0.05
HIF3A-202ENST00000244303 ITGA9Q13797 1035 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 ZRSR2Q15696 482 aaKnown RBP14.72□□□□□ -0.05
HIF3A-202ENST00000244303 VWA5B1Q5TIE3 1220 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 WSCD1Q658N2 575 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 IRGCQ6NXR0 463 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 SLC25A41Q8N5S1 370 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 KCTD13Q8WZ19 329 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 AZIN2Q96A70 460 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 AGAP2Q99490 1192 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 LRRC40Q9H9A6 602 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 ANGPTL2Q9UKU9 493 aa14.72□□□□□ -0.05
HIF3A-202ENST00000244303 A0A088AWK7 358 aa14.71□□□□□ -0.05
HIF3A-202ENST00000244303 KLHL2O95198 593 aa14.71□□□□□ -0.05
HIF3A-202ENST00000244303 AP2A1O95782 977 aa14.71□□□□□ -0.05
HIF3A-202ENST00000244303 ANPEPP15144 967 aa14.71□□□□□ -0.05
HIF3A-202ENST00000244303 MX2P20592 715 aa14.71□□□□□ -0.05
HIF3A-202ENST00000244303 ADRA1BP35368 520 aa14.71□□□□□ -0.05
HIF3A-202ENST00000244303 CPT1AP50416 773 aa14.71□□□□□ -0.05
HIF3A-202ENST00000244303 HUNKP57058 714 aa14.71□□□□□ -0.05
HIF3A-202ENST00000244303 THEMIS2Q5TEJ8 643 aa14.71□□□□□ -0.05
HIF3A-202ENST00000244303 KIAA0319Q5VV43 1072 aa14.71□□□□□ -0.05
HIF3A-202ENST00000244303 STRA8Q7Z7C7 330 aa14.71□□□□□ -0.05
HIF3A-202ENST00000244303 TNS4Q8IZW8 715 aa14.71□□□□□ -0.05
HIF3A-202ENST00000244303 PLD6Q8N2A8 252 aaKnown RBP14.71□□□□□ -0.05
HIF3A-202ENST00000244303 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.71□□□□□ -0.05
HIF3A-202ENST00000244303 SMG8Q8ND04 991 aaKnown RBP14.71□□□□□ -0.05
HIF3A-202ENST00000244303 SYT15Q9BQS2 421 aa14.71□□□□□ -0.05
HIF3A-202ENST00000244303 ULBP1Q9BZM6 244 aa14.71□□□□□ -0.05
HIF3A-202ENST00000244303 AP5M1Q9H0R1 490 aa14.71□□□□□ -0.05
HIF3A-202ENST00000244303 DNAJC28Q9NX36 388 aa14.71□□□□□ -0.05
HIF3A-202ENST00000244303 VANGL2Q9ULK5 521 aa14.71□□□□□ -0.05
HIF3A-202ENST00000244303 MAGED2Q9UNF1 606 aaPredicted RBP14.71□□□□□ -0.05
HIF3A-202ENST00000244303 DNAH12Q6ZR08 3092 aa14.71□□□□□ -0.05
HIF3A-202ENST00000244303 YJEFN3A6XGL0 299 aa14.71□□□□□ -0.06
HIF3A-202ENST00000244303 ZNF195O14628 629 aa14.71□□□□□ -0.06
HIF3A-202ENST00000244303 CPA3P15088 417 aa14.71□□□□□ -0.06
HIF3A-202ENST00000244303 MAGEA12P43365 314 aa14.71□□□□□ -0.06
HIF3A-202ENST00000244303 TAF1CQ15572 869 aaPredicted RBP14.71□□□□□ -0.06
HIF3A-202ENST00000244303 PDPK2PQ6A1A2 396 aa14.71□□□□□ -0.06
HIF3A-202ENST00000244303 DNAAF3Q8N9W5 541 aa14.71□□□□□ -0.06
HIF3A-202ENST00000244303 ZNF184Q99676 751 aaPredicted RBP14.71□□□□□ -0.06
HIF3A-202ENST00000244303 WDR6Q9NNW5 1121 aaKnown RBP14.71□□□□□ -0.06
HIF3A-202ENST00000244303 CACNG4Q9UBN1 327 aa14.71□□□□□ -0.06
HIF3A-202ENST00000244303 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.7□□□□□ -0.06
HIF3A-202ENST00000244303 ZBTB24O43167 697 aaPredicted RBP14.7□□□□□ -0.06
HIF3A-202ENST00000244303 ALOX15P16050 662 aaPredicted RBP14.7□□□□□ -0.06
HIF3A-202ENST00000244303 SPRP35270 261 aaPredicted RBP14.7□□□□□ -0.06
HIF3A-202ENST00000244303 ABCG1P45844 678 aa14.7□□□□□ -0.06
HIF3A-202ENST00000244303 HARS2P49590 506 aaKnown RBP14.7□□□□□ -0.06
HIF3A-202ENST00000244303 SERPINB8P50452 374 aa14.7□□□□□ -0.06
HIF3A-202ENST00000244303 LIMK2P53671 638 aa14.7□□□□□ -0.06
HIF3A-202ENST00000244303 CRYBB1P53674 252 aaPredicted RBP14.7□□□□□ -0.06
HIF3A-202ENST00000244303 TPI1P60174 286 aa14.7□□□□□ -0.06
HIF3A-202ENST00000244303 AP2B1P63010 937 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms