RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 DCUN1D5Q9BTE7 237 aa11.21□□□□□ -0.61
COPA-201ENST00000241704 MFSD1Q9H3U5 465 aa11.21□□□□□ -0.61
COPA-201ENST00000241704 TAS2R1Q9NYW7 299 aa11.21□□□□□ -0.61
COPA-201ENST00000241704 STXBP5LQ9Y2K9 1186 aa11.21□□□□□ -0.61
COPA-201ENST00000241704 CRYBG1Q9Y4K1 1723 aa11.21□□□□□ -0.61
COPA-201ENST00000241704 CD52P31358 61 aa11.21□□□□□ -0.61
COPA-201ENST00000241704 AQP5P55064 265 aa11.21□□□□□ -0.61
COPA-201ENST00000241704 SLC6A3Q01959 620 aa11.21□□□□□ -0.61
COPA-201ENST00000241704 LPCAT4Q643R3 524 aa11.21□□□□□ -0.61
COPA-201ENST00000241704 KLHDC10Q6PID8 442 aa11.21□□□□□ -0.61
COPA-201ENST00000241704 MFSD7Q6UXD7 560 aa11.21□□□□□ -0.61
COPA-201ENST00000241704 ALG3Q92685 438 aa11.21□□□□□ -0.61
COPA-201ENST00000241704 PCDH9Q9HC56 1237 aa11.21□□□□□ -0.61
COPA-201ENST00000241704 LZTS3O60299 673 aaPredicted RBP11.21□□□□□ -0.62
COPA-201ENST00000241704 PEX10O60683 326 aa11.21□□□□□ -0.62
COPA-201ENST00000241704 ARL2P36404 184 aa11.21□□□□□ -0.62
COPA-201ENST00000241704 KPNA1P52294 538 aaPredicted RBP11.21□□□□□ -0.62
COPA-201ENST00000241704 TMEM63BQ5T3F8 832 aa11.21□□□□□ -0.62
COPA-201ENST00000241704 FAXCQ5TGI0 409 aa11.21□□□□□ -0.62
COPA-201ENST00000241704 SCUBE3Q8IX30 993 aa11.21□□□□□ -0.62
COPA-201ENST00000241704 SCAIQ8N9R8 606 aa11.21□□□□□ -0.62
COPA-201ENST00000241704 RFWD2Q8NHY2 731 aa11.21□□□□□ -0.62
COPA-201ENST00000241704 SHISA4Q96DD7 197 aa11.21□□□□□ -0.62
COPA-201ENST00000241704 YIPF2Q9BWQ6 316 aa11.21□□□□□ -0.62
COPA-201ENST00000241704 KCNK4Q9NYG8 393 aa11.21□□□□□ -0.62
COPA-201ENST00000241704 KPNA4O00629 521 aaPredicted RBP11.21□□□□□ -0.62
COPA-201ENST00000241704 ANXA9O76027 345 aa11.21□□□□□ -0.62
COPA-201ENST00000241704 SPIRE1Q08AE8 756 aa11.21□□□□□ -0.62
COPA-201ENST00000241704 MAMLD1Q13495 774 aa11.21□□□□□ -0.62
COPA-201ENST00000241704 PLEKHA7Q6IQ23 1121 aa11.21□□□□□ -0.62
COPA-201ENST00000241704 LINC00523Q86TU6 105 aa11.21□□□□□ -0.62
COPA-201ENST00000241704 CLVS1Q8IUQ0 354 aaPredicted RBP11.21□□□□□ -0.62
COPA-201ENST00000241704 KATNAL2Q8IYT4 538 aa11.21□□□□□ -0.62
COPA-201ENST00000241704 TMEM86AQ8N2M4 240 aa11.21□□□□□ -0.62
COPA-201ENST00000241704 TERB1Q8NA31 727 aa11.21□□□□□ -0.62
COPA-201ENST00000241704 SMYD1Q8NB12 490 aa11.21□□□□□ -0.62
COPA-201ENST00000241704 SDCCAG3Q96C92 435 aa11.21□□□□□ -0.62
COPA-201ENST00000241704 BTBD9Q96Q07 612 aa11.21□□□□□ -0.62
COPA-201ENST00000241704 CNGB3Q9NQW8 809 aa11.21□□□□□ -0.62
COPA-201ENST00000241704 NSMCE4AQ9NXX6 385 aa11.21□□□□□ -0.62
COPA-201ENST00000241704 RABGEF1Q9UJ41 708 aa11.21□□□□□ -0.62
COPA-201ENST00000241704 MYH15Q9Y2K3 1946 aa11.21□□□□□ -0.62
COPA-201ENST00000241704 ENDOD1O94919 500 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 ATP5BP06576 529 aaKnown RBP11.2□□□□□ -0.62
COPA-201ENST00000241704 ACADVLP49748 655 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 ADIGQ0VDE8 80 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 FLOT2Q14254 428 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 FASTKD1Q53R41 847 aaKnown RBP11.2□□□□□ -0.62
COPA-201ENST00000241704 TEDDM1Q5T9Z0 273 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 TMEM53Q6P2H8 277 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 BORCS5Q969J3 196 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 FAM136AQ96C01 138 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 HSPBAP1Q96EW2 488 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 RNPEPQ9H4A4 650 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 LRRC19Q9H756 370 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 GTSE1Q9NYZ3 720 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 HES2Q9Y543 173 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 CNTNAP1P78357 1384 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 SIGLEC16A6NMB1 481 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 E5RJQ4 531 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 EIF2S1P05198 315 aaKnown RBP11.2□□□□□ -0.62
COPA-201ENST00000241704 ARF4P18085 180 aaPredicted RBP11.2□□□□□ -0.62
COPA-201ENST00000241704 YWHAQP27348 245 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 GRM5P41594 1212 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 MAGEA10P43363 369 aaPredicted RBP11.2□□□□□ -0.62
COPA-201ENST00000241704 WDR4P57081 412 aaKnown RBP11.2□□□□□ -0.62
COPA-201ENST00000241704 CHI3L2Q15782 390 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 USP13Q92995 863 aaPredicted RBP11.2□□□□□ -0.62
COPA-201ENST00000241704 SENP8Q96LD8 212 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 TXLNGYQ9BZA5 131 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 ARHGAP26Q9UNA1 814 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 ZNF510Q9Y2H8 683 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 MEI4A8MW99 385 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 F8VP50 259 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 STX7O15400 261 aaKnown RBP11.2□□□□□ -0.62
COPA-201ENST00000241704 TGM2P21980 687 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 CYP2F1P24903 491 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 MIPP30301 263 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 CRYBB1P53674 252 aaPredicted RBP11.2□□□□□ -0.62
COPA-201ENST00000241704 DENND1BQ6P3S1 775 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 PHF13Q86YI8 300 aaPredicted RBP11.2□□□□□ -0.62
COPA-201ENST00000241704 TBC1D19Q8N5T2 526 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 PDZD8Q8NEN9 1154 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 SMARCD1Q96GM5 515 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 CDK5RAP1Q96SZ6 601 aaKnown RBP11.2□□□□□ -0.62
COPA-201ENST00000241704 NTPCRQ9BSD7 190 aaKnown RBP11.2□□□□□ -0.62
COPA-201ENST00000241704 DMAC2Q9NW81 257 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 ST3GAL5Q9UNP4 418 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 MYH7BA7E2Y1 1941 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 LOC100653049A0A140TA62 436 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 KRT34O76011 436 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 RHOCP08134 193 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 CD151P48509 253 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 PTK2BQ14289 1009 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 RGS21Q2M5E4 152 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 NOMO2Q5JPE7 1267 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 LRRC38Q5VT99 294 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 TTC39BQ5VTQ0 682 aaPredicted RBP11.2□□□□□ -0.62
COPA-201ENST00000241704 C16orf89Q6UX73 402 aa11.2□□□□□ -0.62
COPA-201ENST00000241704 HERC6Q8IVU3 1022 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms