RNA–Protein interactions for RNA: ENST00000239893.9

EXOSC8-201, Transcript of exosome component 8, humanhuman

TSL 5

Gene EXOSC8, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC8-201ENST00000239893 PTPN21Q16825 1174 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 EXOC3L4Q17RC7 722 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 TCP11X2Q5H9J9 407 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 MDH1BQ5I0G3 518 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 ARHGAP17Q68EM7 881 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 CWF19L1Q69YN2 538 aaKnown RBP5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 SCARA5Q6ZMJ2 495 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 SPATA31D4Q6ZUB0 917 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 GET4Q7L5D6 327 aaPredicted RBP5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 GRASPQ7Z6J2 395 aaPredicted RBP5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 TADA2BQ86TJ2 420 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 LGI4Q8N135 537 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 C12orf76Q8N812 135 aaPredicted RBP5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 ATAD1Q8NBU5 361 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 DEPDC1BQ8WUY9 529 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 MRPS31Q92665 395 aaKnown RBP5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 MYLPFQ96A32 169 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 IQCDQ96DY2 449 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 TSPAN17Q96FV3 270 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 MSANTD3Q96H12 275 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 PCED1BQ96HM7 432 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 TMEM176AQ96HP8 235 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 RPGRIP1Q96KN7 1286 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 SLC6A18Q96N87 628 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 PGLYRP2Q96PD5 576 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 SLITRK1Q96PX8 696 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 CDK5RAP1Q96SZ6 601 aaKnown RBP5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 MRPL45Q9BRJ2 306 aaKnown RBP5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 TUBGCP2Q9BSJ2 902 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 TTLL2Q9BWV7 592 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 SSBP3Q9BWW4 388 aaPredicted RBP5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 C1QTNF1Q9BXJ1 281 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 SLC12A9Q9BXP2 914 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 UBXN6Q9BZV1 441 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 NDST4Q9H3R1 872 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 FBXO44Q9H4M3 255 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 CCSER2Q9H7U1 834 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 MMRN2Q9H8L6 949 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 CSNK1G1Q9HCP0 422 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 CISHQ9NSE2 258 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 TMEM51Q9NW97 253 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 GCNT4Q9P109 453 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 GTF3C4Q9UKN8 822 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 SORCS3Q9UPU3 1222 aa5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.5□□□□□ -1.53
EXOSC8-201ENST00000239893 TRANK1O15050 2925 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 MYBPHLA2RUH7 354 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 BECN2A8MW95 431 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 C2CD4DB7Z1M9 353 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 ANHXE9PGG2 379 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 FGF10O15520 208 aaPredicted RBP5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 MED7O43513 233 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 VNN2O95498 520 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 TPM3P06753 285 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 PDGFRBP09619 1106 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 OR4Q2P0C623 313 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 SETSIPP0DME0 302 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 VDRP11473 427 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 LAMP2P13473 410 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 NME1P15531 152 aaKnown RBP5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 ATF6P18850 670 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 ACAT1P24752 427 aaKnown RBP5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 NDST1P52848 882 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 BCAT1P54687 386 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 SNX16P57768 344 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 BPIFB4P59827 614 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 PSMC1P62191 440 aaKnown RBP5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 TDGQ13569 410 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 ZNF268Q14587 947 aaPredicted RBP5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 FILIP1LQ4L180 1135 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 TRIM65Q6PJ69 517 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 DENND5BQ6ZUT9 1274 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 DNAJB7Q7Z6W7 309 aaPredicted RBP5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 LRRTM3Q86VH5 581 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 OSTM1Q86WC4 334 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 DDX42Q86XP3 938 aaKnown RBP eCLIP5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 TMC8Q8IU68 726 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 SLITRK4Q8IW52 837 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 NUP93Q8N1F7 819 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 ARHGAP18Q8N392 663 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 PPM1KQ8N3J5 372 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 STKLD1Q8NE28 680 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 DNASE1L2Q92874 299 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 FGF13Q92913 245 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 EXOC4Q96A65 974 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 ELSPBP1Q96BH3 223 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 EEF2KMTQ96G04 330 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 NOX5Q96PH1 765 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 TMEM209Q96SK2 561 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 HNRNPABQ99729 332 aaKnown RBP5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 ANP32EQ9BTT0 268 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 MED10Q9BTT4 135 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 PI4K2AQ9BTU6 479 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 TRIM62Q9BVG3 475 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 INTS2Q9H0H0 1204 aaKnown RBP5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 TASP1Q9H6P5 420 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 APOBEC3GQ9HC16 384 aaKnown RBP5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 CAPN10Q9HC96 672 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 PLCB1Q9NQ66 1216 aa5.49□□□□□ -1.53
EXOSC8-201ENST00000239893 TRPV5Q9NQA5 729 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms