RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 XPAP23025 273 aaPredicted RBP3.76□□□□□ -1.81
UFM1-201ENST00000239878 GTF2H1P32780 548 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 GRM5P41594 1212 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 FXR1P51114 621 aaKnown RBP eCLIP3.76□□□□□ -1.81
UFM1-201ENST00000239878 NLRP11P59045 1033 aaKnown RBP3.76□□□□□ -1.81
UFM1-201ENST00000239878 KCNC3Q14003 757 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 CYLC2Q14093 348 aaPredicted RBP3.76□□□□□ -1.81
UFM1-201ENST00000239878 SF3B4Q15427 424 aaKnown RBP eCLIP3.76□□□□□ -1.812e-6■■■■□ 25.2
UFM1-201ENST00000239878 TGFBIQ15582 683 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 CYP4A22Q5TCH4 519 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 RRAGBQ5VZM2 374 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 EMBQ6PCB8 327 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 OVCH2Q7RTZ1 564 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 PIGWQ7Z7B1 504 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 SATL1Q86VE3 508 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 CLVS1Q8IUQ0 354 aaPredicted RBP3.76□□□□□ -1.81
UFM1-201ENST00000239878 HERC6Q8IVU3 1022 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 KBTBD2Q8IY47 623 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 ENDOVQ8N8Q3 282 aaKnown RBP3.76□□□□□ -1.81
UFM1-201ENST00000239878 KDF1Q8NAX2 398 aaPredicted RBP3.76□□□□□ -1.81
UFM1-201ENST00000239878 DBF4BQ8NFT6 615 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 EXD1Q8NHP7 514 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 CCDC110Q8TBZ0 833 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 IPCEF1Q8WWN9 437 aaPredicted RBP3.76□□□□□ -1.81
UFM1-201ENST00000239878 SEPT8Q92599 483 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 GAL3ST3Q96A11 431 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 CHMP6Q96FZ7 201 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 CALML4Q96GE6 196 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 ZNF317Q96PQ6 595 aaPredicted RBP3.76□□□□□ -1.81
UFM1-201ENST00000239878 NUDCD1Q96RS6 583 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 TM9SF2Q99805 663 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 VN1R3Q9BXE9 311 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 GCOM2Q9BZD3 368 aaPredicted RBP3.76□□□□□ -1.81
UFM1-201ENST00000239878 RAB17Q9H0T7 212 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 CXCL16Q9H2A7 254 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 SEMA4AQ9H3S1 761 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 TMEM161AQ9NX61 479 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 SMARCAL1Q9NZC9 954 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 MARK1Q9P0L2 795 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 TRAF3IP3Q9Y228 551 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 PCDHB14Q9Y5E9 798 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 SAR1BQ9Y6B6 198 aa3.76□□□□□ -1.81
UFM1-201ENST00000239878 PLXNA3P51805 1871 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 CCDC162PA2VCL2 907 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 EPOPA6NHQ4 379 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 FAM25EA8MYX2 175 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 B4E171 279 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 E9PBE3 544 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 MATN2O00339 956 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 PTGESO14684 152 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 POLR2DO15514 142 aaKnown RBP3.75□□□□□ -1.81
UFM1-201ENST00000239878 CLASP2O75122 1294 aaKnown RBP3.75□□□□□ -1.81
UFM1-201ENST00000239878 GUCY1B2O75343 617 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 C1RP00736 705 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 MCF2P10911 925 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 SYN1P17600 705 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 SERPINB6P35237 376 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 CARSP49589 748 aaKnown RBP3.75□□□□□ -1.81
UFM1-201ENST00000239878 VPS41P49754 854 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 CCL23P55773 120 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 B2MP61769 119 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 PPP2R2AP63151 447 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 DCTN2Q13561 401 aaKnown RBP3.75□□□□□ -1.81
UFM1-201ENST00000239878 SEMA5AQ13591 1074 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 TFDP1Q14186 410 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 ZNF267Q14586 743 aaPredicted RBP3.75□□□□□ -1.81
UFM1-201ENST00000239878 ITIH4Q14624 930 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 CLUL1Q15846 466 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 WDR72Q3MJ13 1102 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 DCAF4L1Q3SXM0 396 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 PKDCCQ504Y2 493 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 SLC45A4Q5BKX6 768 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 IGSF11Q5DX21 431 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 C1orf220Q5T0J3 134 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 IL23RQ5VWK5 629 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 DPY19L2P1Q6NXN4 242 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 C15orf39Q6ZRI6 1047 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 USP43Q70EL4 1123 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 MARK2Q7KZI7 788 aaKnown RBP3.75□□□□□ -1.81
UFM1-201ENST00000239878 PATL1Q86TB9 770 aaKnown RBP3.75□□□□□ -1.81
UFM1-201ENST00000239878 SFR1Q86XK3 245 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 GPR65Q8IYL9 337 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 GRAMD1CQ8IYS0 662 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 LRRC34Q8IZ02 419 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 ZBED8Q8IZ13 594 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 BBS5Q8N3I7 341 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 TMEM102Q8N9M5 508 aaPredicted RBP3.75□□□□□ -1.81
UFM1-201ENST00000239878 OR7G1Q8NGA0 311 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 ANKRD36BP1Q96IX9 119 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 UBXN10Q96LJ8 280 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 LRGUKQ96M69 825 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 UQCC2Q9BRT2 126 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 CENPKQ9BS16 269 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 KIFC3Q9BVG8 833 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 CDT1Q9H211 546 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 TTYH1Q9H313 450 aaPredicted RBP3.75□□□□□ -1.81
UFM1-201ENST00000239878 PARVBQ9HBI1 364 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 RAB6BQ9NRW1 208 aa3.75□□□□□ -1.81
UFM1-201ENST00000239878 TOPORSQ9NS56 1045 aaPredicted RBP3.75□□□□□ -1.81
UFM1-201ENST00000239878 DCAF16Q9NXF7 216 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms