RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 ARL8BQ9NVJ2 186 aa16.55■□□□□ 0.24
UBE3D-201ENST00000237186 PIH1D1Q9NWS0 290 aaKnown RBP16.55■□□□□ 0.24
UBE3D-201ENST00000237186 ARHGEF38Q9NXL2 777 aa16.55■□□□□ 0.24
UBE3D-201ENST00000237186 SLC17A6Q9P2U8 582 aa16.55■□□□□ 0.24
UBE3D-201ENST00000237186 L3MBTL1Q9Y468 752 aa16.55■□□□□ 0.24
UBE3D-201ENST00000237186 PCNTO95613 3336 aa16.55■□□□□ 0.24
UBE3D-201ENST00000237186 ARHGEF37A1IGU5 675 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 KIF3CO14782 793 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 PSMD3O43242 534 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 SKIP12755 728 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 TYMPP19971 482 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 THPOP40225 353 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 BRCC3P46736 316 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 E2F5Q15329 346 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 ARID3BQ8IVW6 561 aaPredicted RBP16.54■□□□□ 0.24
UBE3D-201ENST00000237186 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.54■□□□□ 0.24
UBE3D-201ENST00000237186 KLHDC9Q8NEP7 349 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 SUSD3Q96L08 255 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 HAPLN3Q96S86 360 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 TXNDC16Q9P2K2 825 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 SQORQ9Y6N5 450 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 FCHO1O14526 889 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 POMCP01189 267 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 ERVK-10P10266 1014 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 HOXC13P31276 330 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 SPRP35270 261 aaPredicted RBP16.54■□□□□ 0.24
UBE3D-201ENST00000237186 CCNG1P51959 295 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 COG7P83436 770 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 PDE1BQ01064 536 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 LPIN1Q14693 890 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 ANKRD20A4Q4UJ75 823 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 FASTKD1Q53R41 847 aaKnown RBP16.54■□□□□ 0.24
UBE3D-201ENST00000237186 FAM26DQ5JW98 314 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 BRMS1LQ5PSV4 323 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 N4BP2L1Q5TBK1 243 aaPredicted RBP16.54■□□□□ 0.24
UBE3D-201ENST00000237186 MBLAC2Q68D91 279 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 CCSAPQ6IQ19 270 aaPredicted RBP16.54■□□□□ 0.24
UBE3D-201ENST00000237186 LRRTM3Q86VH5 581 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 RASSF3Q86WH2 238 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 THEM5Q8N1Q8 247 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 OR10T2Q8NGX3 314 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 RBBP8Q99708 897 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 MIPEPQ99797 713 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 C20orf27Q9GZN8 174 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 IL22Q9GZX6 179 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 WWP1Q9H0M0 922 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 NOP53Q9NZM5 478 aaKnown RBP16.54■□□□□ 0.24
UBE3D-201ENST00000237186 NEU3Q9UQ49 428 aa16.54■□□□□ 0.24
UBE3D-201ENST00000237186 HBS1LQ9Y450 684 aaKnown RBP16.54■□□□□ 0.24
UBE3D-201ENST00000237186 CAPN14A8MX76 684 aa16.53■□□□□ 0.24
UBE3D-201ENST00000237186 TOP3BO95985 862 aaKnown RBP16.53■□□□□ 0.24
UBE3D-201ENST00000237186 PROCP04070 461 aa16.53■□□□□ 0.24
UBE3D-201ENST00000237186 PRKCGP05129 697 aa16.53■□□□□ 0.24
UBE3D-201ENST00000237186 ASGR1P07306 291 aa16.53■□□□□ 0.24
UBE3D-201ENST00000237186 LIMK2P53671 638 aa16.53■□□□□ 0.24
UBE3D-201ENST00000237186 FCGRTP55899 365 aa16.53■□□□□ 0.24
UBE3D-201ENST00000237186 TEDDM1Q5T9Z0 273 aa16.53■□□□□ 0.24
UBE3D-201ENST00000237186 AGAP3Q96P47 875 aa16.53■□□□□ 0.24
UBE3D-201ENST00000237186 MCMBPQ9BTE3 642 aa16.53■□□□□ 0.24
UBE3D-201ENST00000237186 CADM1Q9BY67 442 aaKnown RBP16.53■□□□□ 0.24
UBE3D-201ENST00000237186 ABCC13Q9NSE7 274 aa16.53■□□□□ 0.24
UBE3D-201ENST00000237186 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.53■□□□□ 0.24
UBE3D-201ENST00000237186 ARHGAP42A6NI28 874 aa16.52■□□□□ 0.24
UBE3D-201ENST00000237186 GSC2O15499 205 aa16.52■□□□□ 0.24
UBE3D-201ENST00000237186 IRAK2O43187 625 aa16.52■□□□□ 0.24
UBE3D-201ENST00000237186 ANP32DO95626 131 aa16.52■□□□□ 0.24
UBE3D-201ENST00000237186 FGF3P11487 239 aaPredicted RBP16.52■□□□□ 0.24
UBE3D-201ENST00000237186 NFKB1P19838 968 aa16.52■□□□□ 0.24
UBE3D-201ENST00000237186 CCNCP24863 283 aa16.52■□□□□ 0.24
UBE3D-201ENST00000237186 CST5P28325 142 aaPredicted RBP16.52■□□□□ 0.24
UBE3D-201ENST00000237186 TYK2P29597 1187 aa16.52■□□□□ 0.24
UBE3D-201ENST00000237186 OLIG2Q13516 323 aa16.52■□□□□ 0.24
UBE3D-201ENST00000237186 PRPSAP1Q14558 356 aa16.52■□□□□ 0.24
UBE3D-201ENST00000237186 OVOS1Q6IE37 1185 aa16.52■□□□□ 0.24
UBE3D-201ENST00000237186 CES3Q6UWW8 571 aa16.52■□□□□ 0.24
UBE3D-201ENST00000237186 ZNF598Q86UK7 904 aaKnown RBP16.52■□□□□ 0.24
UBE3D-201ENST00000237186 LZTR1Q8N653 840 aa16.52■□□□□ 0.24
UBE3D-201ENST00000237186 DNAAF3Q8N9W5 541 aa16.52■□□□□ 0.24
UBE3D-201ENST00000237186 ADAM2Q99965 735 aa16.52■□□□□ 0.24
UBE3D-201ENST00000237186 ARHGAP39Q9C0H5 1083 aa16.52■□□□□ 0.24
UBE3D-201ENST00000237186 NMUR2Q9GZQ4 415 aa16.52■□□□□ 0.24
UBE3D-201ENST00000237186 STN1Q9H668 368 aaKnown RBP16.52■□□□□ 0.24
UBE3D-201ENST00000237186 ZNF395Q9H8N7 513 aaPredicted RBP16.52■□□□□ 0.24
UBE3D-201ENST00000237186 MCM8Q9UJA3 840 aa16.52■□□□□ 0.24
UBE3D-201ENST00000237186 SORCS3Q9UPU3 1222 aa16.52■□□□□ 0.24
UBE3D-201ENST00000237186 SNX10Q9Y5X0 201 aa16.52■□□□□ 0.24
UBE3D-201ENST00000237186 TNFRSF10BO14763 440 aa16.52■□□□□ 0.23
UBE3D-201ENST00000237186 USP12O75317 370 aa16.52■□□□□ 0.23
UBE3D-201ENST00000237186 JCHAINP01591 159 aa16.52■□□□□ 0.23
UBE3D-201ENST00000237186 SERPINE1P05121 402 aa16.52■□□□□ 0.23
UBE3D-201ENST00000237186 GRK2P25098 689 aa16.52■□□□□ 0.23
UBE3D-201ENST00000237186 FLT3LGP49771 235 aa16.52■□□□□ 0.23
UBE3D-201ENST00000237186 CDK7P50613 346 aa16.52■□□□□ 0.23
UBE3D-201ENST00000237186 TSPY1Q01534 308 aa16.52■□□□□ 0.23
UBE3D-201ENST00000237186 CDH17Q12864 832 aa16.52■□□□□ 0.23
UBE3D-201ENST00000237186 PCLAFQ15004 111 aa16.52■□□□□ 0.23
UBE3D-201ENST00000237186 KCNA10Q16322 511 aa16.52■□□□□ 0.23
UBE3D-201ENST00000237186 CCDC153Q494R4 210 aa16.52■□□□□ 0.23
UBE3D-201ENST00000237186 ARTNQ5T4W7 220 aa16.52■□□□□ 0.23
UBE3D-201ENST00000237186 MANEALQ5VSG8 457 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms