RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 PRR23CQ6ZRP0 262 aa13.29□□□□□ -0.28
MSH2-201ENST00000233146 CHSY3Q70JA7 882 aa13.29□□□□□ -0.28
MSH2-201ENST00000233146 PGAM4Q8N0Y7 254 aa13.29□□□□□ -0.28
MSH2-201ENST00000233146 ZSCAN18Q8TBC5 510 aaPredicted RBP13.29□□□□□ -0.28
MSH2-201ENST00000233146 USP13Q92995 863 aaPredicted RBP13.29□□□□□ -0.28
MSH2-201ENST00000233146 FAM20AQ96MK3 541 aa13.29□□□□□ -0.28
MSH2-201ENST00000233146 TMEM117Q9H0C3 514 aa13.29□□□□□ -0.28
MSH2-201ENST00000233146 CPVLQ9H3G5 476 aa13.29□□□□□ -0.28
MSH2-201ENST00000233146 PLEKHA5Q9HAU0 1116 aa13.29□□□□□ -0.28
MSH2-201ENST00000233146 SYTL2Q9HCH5 934 aa13.29□□□□□ -0.28
MSH2-201ENST00000233146 ATP13A2Q9NQ11 1180 aa13.29□□□□□ -0.28
MSH2-201ENST00000233146 TRIM77I1YAP6 450 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 MTSS1O43312 755 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 KRT37O76014 449 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 PRKACAP17612 351 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 RRM2P31350 389 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 GJC1P36383 396 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 POLR2IP36954 125 aaKnown RBP13.28□□□□□ -0.28
MSH2-201ENST00000233146 BCAMP50895 628 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 NXNQ6DKJ4 435 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 SNX32Q86XE0 403 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 ANKFN1Q8N957 763 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 SNX13Q9Y5W8 968 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 TNS3Q68CZ2 1445 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 CICQ96RK0 1608 aaPredicted RBP13.28□□□□□ -0.28
MSH2-201ENST00000233146 GAS7O60861 476 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 DEAF1O75398 565 aaPredicted RBP13.28□□□□□ -0.28
MSH2-201ENST00000233146 ARHGEF15O94989 841 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 FGF3P11487 239 aaPredicted RBP13.28□□□□□ -0.28
MSH2-201ENST00000233146 CKMT2P17540 419 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 CD58P19256 250 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 PTGS2P35354 604 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 NUMBP49757 651 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 CLCNKBP51801 687 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 CTSWP56202 376 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 SLC10A2Q12908 348 aaPredicted RBP13.28□□□□□ -0.28
MSH2-201ENST00000233146 TRIM32Q13049 653 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 AASDHQ4L235 1098 aaPredicted RBP13.28□□□□□ -0.28
MSH2-201ENST00000233146 FASTKD1Q53R41 847 aaKnown RBP13.28□□□□□ -0.28
MSH2-201ENST00000233146 RSBN1Q5VWQ0 802 aaPredicted RBP13.28□□□□□ -0.28
MSH2-201ENST00000233146 PLA2G4FQ68DD2 849 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 LYPD8Q6UX82 237 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 GALNT7Q86SF2 657 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 LACC1Q8IV20 430 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.28□□□□□ -0.28
MSH2-201ENST00000233146 APBB2Q92870 758 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 SLCO4A1Q96BD0 722 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 ZNF560Q96MR9 790 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 SORT1Q99523 831 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 ADAMTS10Q9H324 1103 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 GIMAP4Q9NUV9 329 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 MTRRQ9UBK8 725 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 RGSL1A5PLK6 1076 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 SHOXO15266 292 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 PROSCO94903 275 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 KCNK2O95069 426 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 C1QAP02745 245 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 ITGAVP06756 1048 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 VAC14Q08AM6 782 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 ZCCHC7Q8N3Z6 543 aaKnown RBP13.28□□□□□ -0.28
MSH2-201ENST00000233146 DTX3Q8N9I9 347 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 PNPT1Q8TCS8 783 aaKnown RBP13.28□□□□□ -0.28
MSH2-201ENST00000233146 KAT5Q92993 513 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 ADI1Q9BV57 179 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 MKRN2Q9H000 416 aaKnown RBP13.28□□□□□ -0.28
MSH2-201ENST00000233146 BCAS3Q9H6U6 928 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 NOL11Q9H8H0 719 aaKnown RBP13.28□□□□□ -0.28
MSH2-201ENST00000233146 NDFIP2Q9NV92 336 aa13.28□□□□□ -0.28
MSH2-201ENST00000233146 MED24O75448 989 aa13.27□□□□□ -0.28
MSH2-201ENST00000233146 KRT8P05787 483 aa13.27□□□□□ -0.28
MSH2-201ENST00000233146 NFX1Q12986 1120 aaKnown RBP13.27□□□□□ -0.28
MSH2-201ENST00000233146 MTM1Q13496 603 aa13.27□□□□□ -0.28
MSH2-201ENST00000233146 AQP6Q13520 282 aa13.27□□□□□ -0.28
MSH2-201ENST00000233146 SLC36A3Q495N2 470 aa13.27□□□□□ -0.28
MSH2-201ENST00000233146 KCNT2Q6UVM3 1135 aa13.27□□□□□ -0.28
MSH2-201ENST00000233146 BPIFB6Q8NFQ5 453 aa13.27□□□□□ -0.28
MSH2-201ENST00000233146 DGKBQ9Y6T7 804 aa13.27□□□□□ -0.28
MSH2-201ENST00000233146 CFLARO15519 480 aa13.27□□□□□ -0.29
MSH2-201ENST00000233146 GRIN3BO60391 1043 aa13.27□□□□□ -0.29
MSH2-201ENST00000233146 IFNB1P01574 187 aa13.27□□□□□ -0.29
MSH2-201ENST00000233146 HLCSP50747 726 aa13.27□□□□□ -0.29
MSH2-201ENST00000233146 PRKCEQ02156 737 aa13.27□□□□□ -0.29
MSH2-201ENST00000233146 RHDQ02161 417 aa13.27□□□□□ -0.29
MSH2-201ENST00000233146 MERTKQ12866 999 aa13.27□□□□□ -0.29
MSH2-201ENST00000233146 SNX17Q15036 470 aa13.27□□□□□ -0.29
MSH2-201ENST00000233146 STK11Q15831 433 aa13.27□□□□□ -0.29
MSH2-201ENST00000233146 NDUFAF5Q5TEU4 345 aa13.27□□□□□ -0.29
MSH2-201ENST00000233146 FAM205BPQ63HN1 556 aa13.27□□□□□ -0.29
MSH2-201ENST00000233146 PDIK1LQ8N165 341 aa13.27□□□□□ -0.29
MSH2-201ENST00000233146 PACRGLQ8N7B6 248 aa13.27□□□□□ -0.29
MSH2-201ENST00000233146 NKD2Q969F2 451 aaPredicted RBP13.27□□□□□ -0.29
MSH2-201ENST00000233146 HDAC11Q96DB2 347 aa13.27□□□□□ -0.29
MSH2-201ENST00000233146 DUS3LQ96G46 650 aaKnown RBP13.27□□□□□ -0.29
MSH2-201ENST00000233146 VCPIP1Q96JH7 1222 aa13.27□□□□□ -0.29
MSH2-201ENST00000233146 SEZ6LQ9BYH1 1024 aa13.27□□□□□ -0.29
MSH2-201ENST00000233146 FBXO8Q9NRD0 319 aa13.27□□□□□ -0.29
MSH2-201ENST00000233146 DMAC2Q9NW81 257 aa13.27□□□□□ -0.29
MSH2-201ENST00000233146 KCND2Q9NZV8 630 aa13.27□□□□□ -0.29
MSH2-201ENST00000233146 RWDD3Q9Y3V2 267 aa13.27□□□□□ -0.29
MSH2-201ENST00000233146 CACNA1SQ13698 1873 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms