RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 CPXM1Q96SM3 734 aa21.05■□□□□ 0.96
SNX3-201ENST00000230085 TBCBQ99426 244 aa21.05■□□□□ 0.96
SNX3-201ENST00000230085 MTMR12Q9C0I1 747 aa21.05■□□□□ 0.96
SNX3-201ENST00000230085 MTIF3Q9H2K0 278 aaKnown RBP21.05■□□□□ 0.96
SNX3-201ENST00000230085 EBF3Q9H4W6 596 aa21.05■□□□□ 0.96
SNX3-201ENST00000230085 RAB6BQ9NRW1 208 aa21.05■□□□□ 0.96
SNX3-201ENST00000230085 ETNK2Q9NVF9 386 aa21.05■□□□□ 0.96
SNX3-201ENST00000230085 PCDHB7Q9Y5E2 793 aa21.05■□□□□ 0.96
SNX3-201ENST00000230085 ZNF623O75123 536 aa21.05■□□□□ 0.96
SNX3-201ENST00000230085 COPAP53621 1224 aa21.05■□□□□ 0.96
SNX3-201ENST00000230085 CCNIQ14094 377 aa21.05■□□□□ 0.96
SNX3-201ENST00000230085 SEZ6Q53EL9 994 aa21.05■□□□□ 0.96
SNX3-201ENST00000230085 TEDDM1Q5T9Z0 273 aa21.05■□□□□ 0.96
SNX3-201ENST00000230085 RAPH1Q70E73 1250 aa21.05■□□□□ 0.96
SNX3-201ENST00000230085 ZNF598Q86UK7 904 aaKnown RBP21.05■□□□□ 0.96
SNX3-201ENST00000230085 RASSF3Q86WH2 238 aa21.05■□□□□ 0.96
SNX3-201ENST00000230085 CTAGE3PQ8IX95 158 aa21.05■□□□□ 0.96
SNX3-201ENST00000230085 ADGRF2Q8IZF7 708 aa21.05■□□□□ 0.96
SNX3-201ENST00000230085 TDHQ8IZJ6 230 aa21.05■□□□□ 0.96
SNX3-201ENST00000230085 CFAP36Q96G28 342 aa21.05■□□□□ 0.96
SNX3-201ENST00000230085 CLPTM1LQ96KA5 538 aa21.05■□□□□ 0.96
SNX3-201ENST00000230085 C20orf27Q9GZN8 174 aa21.05■□□□□ 0.96
SNX3-201ENST00000230085 RNF39Q9H2S5 420 aa21.05■□□□□ 0.96
SNX3-201ENST00000230085 VRTNQ9H8Y1 702 aa21.05■□□□□ 0.96
SNX3-201ENST00000230085 DENRO43583 198 aaKnown RBP21.04■□□□□ 0.96
SNX3-201ENST00000230085 GLRA3O75311 464 aa21.04■□□□□ 0.96
SNX3-201ENST00000230085 GCATO75600 419 aa21.04■□□□□ 0.96
SNX3-201ENST00000230085 ERBB2P04626 1255 aa21.04■□□□□ 0.96
SNX3-201ENST00000230085 CSH1P0DML2 217 aa21.04■□□□□ 0.96
SNX3-201ENST00000230085 CSH2P0DML3 217 aa21.04■□□□□ 0.96
SNX3-201ENST00000230085 MLNP12872 115 aa21.04■□□□□ 0.96
SNX3-201ENST00000230085 OSTNP61366 133 aa21.04■□□□□ 0.96
SNX3-201ENST00000230085 PDE1BQ01064 536 aa21.04■□□□□ 0.96
SNX3-201ENST00000230085 MSLNQ13421 630 aaPredicted RBP21.04■□□□□ 0.96
SNX3-201ENST00000230085 TRPC3Q13507 836 aa21.04■□□□□ 0.96
SNX3-201ENST00000230085 DCAF4L1Q3SXM0 396 aa21.04■□□□□ 0.96
SNX3-201ENST00000230085 ANKRD20A4Q4UJ75 823 aa21.04■□□□□ 0.96
SNX3-201ENST00000230085 BOLA3Q53S33 107 aa21.04■□□□□ 0.96
SNX3-201ENST00000230085 RNF111Q6ZNA4 994 aa21.04■□□□□ 0.96
SNX3-201ENST00000230085 NDUFAF2Q8N183 169 aa21.04■□□□□ 0.96
SNX3-201ENST00000230085 MARVELD2Q8N4S9 558 aa21.04■□□□□ 0.96
SNX3-201ENST00000230085 PLD5Q8N7P1 536 aa21.04■□□□□ 0.96
SNX3-201ENST00000230085 NAT14Q8WUY8 206 aa21.04■□□□□ 0.96
SNX3-201ENST00000230085 CMTM5Q96DZ9 223 aa21.04■□□□□ 0.96
SNX3-201ENST00000230085 PEBP4Q96S96 227 aa21.04■□□□□ 0.96
SNX3-201ENST00000230085 NDNQ99608 321 aa21.04■□□□□ 0.96
SNX3-201ENST00000230085 TTC1Q99614 292 aa21.04■□□□□ 0.96
SNX3-201ENST00000230085 APOL6Q9BWW8 343 aa21.04■□□□□ 0.96
SNX3-201ENST00000230085 ATXN10Q9UBB4 475 aa21.04■□□□□ 0.96
SNX3-201ENST00000230085 PCDHA11Q9Y5I1 949 aa21.04■□□□□ 0.96
SNX3-201ENST00000230085 SF3B1O75533 1304 aaKnown RBP eCLIP21.03■□□□□ 0.962e-7■■■■■ 41.4
SNX3-201ENST00000230085 C2CD4BA6NLJ0 364 aa21.03■□□□□ 0.96
SNX3-201ENST00000230085 EOMESO95936 686 aa21.03■□□□□ 0.96
SNX3-201ENST00000230085 MCF2P10911 925 aa21.03■□□□□ 0.96
SNX3-201ENST00000230085 FGF3P11487 239 aaPredicted RBP21.03■□□□□ 0.96
SNX3-201ENST00000230085 VCLP18206 1134 aa21.03■□□□□ 0.96
SNX3-201ENST00000230085 AKAP5P24588 427 aa21.03■□□□□ 0.96
SNX3-201ENST00000230085 ALDH18A1P54886 795 aaKnown RBP21.03■□□□□ 0.96
SNX3-201ENST00000230085 FAM109BQ6ICB4 259 aaPredicted RBP21.03■□□□□ 0.96
SNX3-201ENST00000230085 ZNF534Q76KX8 674 aa21.03■□□□□ 0.96
SNX3-201ENST00000230085 MRPL10Q7Z7H8 261 aaKnown RBP21.03■□□□□ 0.96
SNX3-201ENST00000230085 TMEM192Q8IY95 271 aa21.03■□□□□ 0.96
SNX3-201ENST00000230085 IRGQQ8WZA9 623 aa21.03■□□□□ 0.96
SNX3-201ENST00000230085 ZNF778Q96MU6 729 aa21.03■□□□□ 0.96
SNX3-201ENST00000230085 FAM210AQ96ND0 272 aa21.03■□□□□ 0.96
SNX3-201ENST00000230085 CALN1Q9BXU9 219 aa21.03■□□□□ 0.96
SNX3-201ENST00000230085 ELAC1Q9H777 363 aaKnown RBP21.03■□□□□ 0.96
SNX3-201ENST00000230085 TMEM161AQ9NX61 479 aa21.03■□□□□ 0.96
SNX3-201ENST00000230085 SNTG2Q9NY99 539 aa21.03■□□□□ 0.96
SNX3-201ENST00000230085 LRFN2Q9ULH4 789 aa21.03■□□□□ 0.96
SNX3-201ENST00000230085 COLQQ9Y215 455 aaPredicted RBP21.03■□□□□ 0.96
SNX3-201ENST00000230085 APOBEC2Q9Y235 224 aaKnown RBP21.03■□□□□ 0.96
SNX3-201ENST00000230085 MAD1L1Q9Y6D9 718 aa21.03■□□□□ 0.96
SNX3-201ENST00000230085 SERPINE1P05121 402 aa21.02■□□□□ 0.96
SNX3-201ENST00000230085 ZCCHC18P0CG32 403 aa21.02■□□□□ 0.96
SNX3-201ENST00000230085 HARS2P49590 506 aaKnown RBP21.02■□□□□ 0.96
SNX3-201ENST00000230085 NUMBP49757 651 aa21.02■□□□□ 0.96
SNX3-201ENST00000230085 DEUP1Q05D60 604 aa21.02■□□□□ 0.96
SNX3-201ENST00000230085 OGFRL1Q5TC84 451 aaPredicted RBP21.02■□□□□ 0.96
SNX3-201ENST00000230085 METTL21CQ5VZV1 264 aa21.02■□□□□ 0.96
SNX3-201ENST00000230085 AGMOQ6ZNB7 445 aa21.02■□□□□ 0.96
SNX3-201ENST00000230085 KBTBD6Q86V97 674 aa21.02■□□□□ 0.96
SNX3-201ENST00000230085 NPAS4Q8IUM7 802 aa21.02■□□□□ 0.96
SNX3-201ENST00000230085 GSTCDQ8NEC7 633 aa21.02■□□□□ 0.96
SNX3-201ENST00000230085 FAM81AQ8TBF8 368 aa21.02■□□□□ 0.96
SNX3-201ENST00000230085 RILPQ96NA2 401 aa21.02■□□□□ 0.96
SNX3-201ENST00000230085 CYP3A43Q9HB55 503 aa21.02■□□□□ 0.96
SNX3-201ENST00000230085 PTTG2Q9NZH5 202 aa21.02■□□□□ 0.96
SNX3-201ENST00000230085 C6orf203Q9P0P8 240 aaPredicted RBP21.02■□□□□ 0.96
SNX3-201ENST00000230085 CDH23Q9H251 3354 aa21.02■□□□□ 0.96
SNX3-201ENST00000230085 GRXCR1A8MXD5 290 aa21.02■□□□□ 0.96
SNX3-201ENST00000230085 CYB561D2O14569 222 aa21.02■□□□□ 0.96
SNX3-201ENST00000230085 SIN3BO75182 1162 aa21.02■□□□□ 0.96
SNX3-201ENST00000230085 CAPNS1P04632 268 aa21.02■□□□□ 0.96
SNX3-201ENST00000230085 GPD1P21695 349 aa21.02■□□□□ 0.96
SNX3-201ENST00000230085 IL4RP24394 825 aa21.02■□□□□ 0.96
SNX3-201ENST00000230085 CHN2P52757 468 aa21.02■□□□□ 0.96
SNX3-201ENST00000230085 CDH6P55285 790 aa21.02■□□□□ 0.96
SNX3-201ENST00000230085 SCARA3Q6AZY7 606 aa21.02■□□□□ 0.96
SNX3-201ENST00000230085 UGT2A3Q6UWM9 527 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms