RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 CDC16Q13042 620 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 NCAM1P13591 858 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 MIPP30301 263 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 PTPN11Q06124 597 aaPredicted RBP14.06□□□□□ -0.16
HCFC2-201ENST00000229330 PKN3Q6P5Z2 889 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 TUBGCP5Q96RT8 1024 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 LNPEPQ9UIQ6 1025 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 TCRBV9S1A1TA0A576 114 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 NOL4O94818 638 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 BPGMP07738 259 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 CCNB1P14635 433 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 IL1R1P14778 569 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 RAP1GAPP47736 663 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 NR2C2P49116 596 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 AQP4P55087 323 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 RAB15P59190 212 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 CACNB2Q08289 660 aaPredicted RBP14.06□□□□□ -0.16
HCFC2-201ENST00000229330 DEFB132Q7Z7B7 95 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 DNAJC1Q96KC8 554 aaKnown RBP14.06□□□□□ -0.16
HCFC2-201ENST00000229330 C7orf26Q96N11 449 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 ZNF317Q96PQ6 595 aaPredicted RBP14.06□□□□□ -0.16
HCFC2-201ENST00000229330 TJP2Q9UDY2 1190 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 HACL1Q9UJ83 578 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 MTF2Q9Y483 593 aaPredicted RBP14.06□□□□□ -0.16
HCFC2-201ENST00000229330 SNTNA6NMZ2 147 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 AMPD1P23109 780 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 POU1F1P28069 291 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 CCT3P49368 545 aaKnown RBP14.06□□□□□ -0.16
HCFC2-201ENST00000229330 NAGLUP54802 743 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 XRRA1Q6P2D8 792 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 DRAXINQ8NBI3 349 aaPredicted RBP14.06□□□□□ -0.16
HCFC2-201ENST00000229330 ACER1Q8TDN7 264 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 HPS4Q9NQG7 708 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 KRT84Q9NSB2 600 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 FBXO28Q9NVF7 368 aa14.06□□□□□ -0.16
HCFC2-201ENST00000229330 H0YC42 278 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 IMPDH2P12268 514 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 RRM2P31350 389 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 NAMPTP43490 491 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 NEK3P51956 506 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 TAB1Q15750 504 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 ATP13A4Q4VNC1 1196 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 ATG4CQ96DT6 458 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 TMEM176AQ96HP8 235 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 PRMT7Q9NVM4 692 aaPredicted RBP14.05□□□□□ -0.16
HCFC2-201ENST00000229330 TALDO1P37837 337 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 NPY2RP49146 381 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 PRIM2P49643 509 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 KLHL12Q53G59 568 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 PTAR1Q7Z6K3 402 aaPredicted RBP14.05□□□□□ -0.16
HCFC2-201ENST00000229330 FAM9CQ8IZT9 166 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 FICDQ9BVA6 458 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 PREBQ9HCU5 417 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 MID1IP1Q9NPA3 183 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 VPS45Q9NRW7 570 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 PNPOQ9NVS9 261 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 WWOXQ9NZC7 414 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 DUSP12Q9UNI6 340 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 RAP2CQ9Y3L5 183 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 TRIM17Q9Y577 477 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 TCHHQ07283 1943 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 EFCAB10A6NFE3 127 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 VPS4BO75351 444 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 MSH3P20585 1137 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 FAM131BQ86XD5 332 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 EFHBQ8N7U6 833 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 UTP15Q8TED0 518 aaKnown RBP14.05□□□□□ -0.16
HCFC2-201ENST00000229330 HDHD2Q9H0R4 259 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 LRRC42Q9Y546 428 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 JCHAINP01591 159 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 ERVK-10P10266 1014 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 CREB1P16220 341 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 CDH17Q12864 832 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 UGT3A1Q6NUS8 523 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 PALB2Q86YC2 1186 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 ZHX1-C8orf76Q96EF9 292 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 C19orf60Q96EN9 201 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 MMTAG2Q9BU76 263 aaKnown RBP14.05□□□□□ -0.16
HCFC2-201ENST00000229330 CEP41Q9BYV8 373 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 SPRTNQ9H040 489 aaPredicted RBP14.05□□□□□ -0.16
HCFC2-201ENST00000229330 SYTL2Q9HCH5 934 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 RPRD1BQ9NQG5 326 aaKnown RBP14.05□□□□□ -0.16
HCFC2-201ENST00000229330 CDH9Q9ULB4 789 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 TELO2Q9Y4R8 837 aa14.05□□□□□ -0.16
HCFC2-201ENST00000229330 CD4P01730 458 aa14.04□□□□□ -0.16
HCFC2-201ENST00000229330 VEGFAP15692 232 aaPredicted RBP14.04□□□□□ -0.16
HCFC2-201ENST00000229330 GRIK1P39086 918 aa14.04□□□□□ -0.16
HCFC2-201ENST00000229330 FCHO2Q0JRZ9 810 aa14.04□□□□□ -0.16
HCFC2-201ENST00000229330 ZRANB3Q5FWF4 1079 aa14.04□□□□□ -0.16
HCFC2-201ENST00000229330 APTXQ7Z2E3 356 aaKnown RBP14.04□□□□□ -0.16
HCFC2-201ENST00000229330 C4orf19Q8IY42 314 aa14.04□□□□□ -0.16
HCFC2-201ENST00000229330 EPB41L1Q9H4G0 881 aa14.04□□□□□ -0.16
HCFC2-201ENST00000229330 TDRKHQ9Y2W6 561 aaKnown RBP14.04□□□□□ -0.16
HCFC2-201ENST00000229330 NADKO95544 446 aaPredicted RBP14.04□□□□□ -0.16
HCFC2-201ENST00000229330 CAP2P40123 477 aa14.04□□□□□ -0.16
HCFC2-201ENST00000229330 PTGIRP43119 386 aa14.04□□□□□ -0.16
HCFC2-201ENST00000229330 ARPC4P59998 168 aa14.04□□□□□ -0.16
HCFC2-201ENST00000229330 TIMM50Q3ZCQ8 353 aa14.04□□□□□ -0.16
HCFC2-201ENST00000229330 MTX3Q5HYI7 312 aa14.04□□□□□ -0.16
HCFC2-201ENST00000229330 UTS2BQ765I0 119 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms