RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 BAG2O95816 211 aa16.65■□□□□ 0.26
LTBR-201ENST00000228918 NPR3P17342 541 aa16.65■□□□□ 0.26
LTBR-201ENST00000228918 WARSP23381 471 aaKnown RBP16.65■□□□□ 0.26
LTBR-201ENST00000228918 PTPN3P26045 913 aa16.65■□□□□ 0.26
LTBR-201ENST00000228918 SPRP35270 261 aaPredicted RBP16.65■□□□□ 0.26
LTBR-201ENST00000228918 CDK7P50613 346 aa16.65■□□□□ 0.26
LTBR-201ENST00000228918 CDC42EP1Q00587 391 aa16.65■□□□□ 0.26
LTBR-201ENST00000228918 ROR2Q01974 943 aaKnown RBP16.65■□□□□ 0.26
LTBR-201ENST00000228918 NME3Q13232 169 aa16.65■□□□□ 0.26
LTBR-201ENST00000228918 PCBP1Q15365 356 aaKnown RBP eCLIP16.65■□□□□ 0.26
LTBR-201ENST00000228918 DGKDQ16760 1214 aa16.65■□□□□ 0.26
LTBR-201ENST00000228918 DUSP28Q4G0W2 176 aa16.65■□□□□ 0.26
LTBR-201ENST00000228918 XKR4Q5GH76 650 aa16.65■□□□□ 0.26
LTBR-201ENST00000228918 PGM2L1Q6PCE3 622 aa16.65■□□□□ 0.26
LTBR-201ENST00000228918 PLD6Q8N2A8 252 aaKnown RBP16.65■□□□□ 0.26
LTBR-201ENST00000228918 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.65■□□□□ 0.262e-6■■■■■ 95.3
LTBR-201ENST00000228918 WNT8BQ93098 351 aa16.65■□□□□ 0.26
LTBR-201ENST00000228918 S100A14Q9HCY8 104 aa16.65■□□□□ 0.26
LTBR-201ENST00000228918 XPOTO43592 962 aaKnown RBP16.65■□□□□ 0.26
LTBR-201ENST00000228918 BUD23O43709 281 aaKnown RBP16.65■□□□□ 0.26
LTBR-201ENST00000228918 KCNE1P15382 129 aa16.65■□□□□ 0.26
LTBR-201ENST00000228918 NDUFV1P49821 464 aa16.65■□□□□ 0.26
LTBR-201ENST00000228918 CACNA2D1P54289 1103 aa16.65■□□□□ 0.26
LTBR-201ENST00000228918 CDC16Q13042 620 aa16.65■□□□□ 0.26
LTBR-201ENST00000228918 FRG1Q14331 258 aaKnown RBP16.65■□□□□ 0.26
LTBR-201ENST00000228918 STRA8Q7Z7C7 330 aa16.65■□□□□ 0.26
LTBR-201ENST00000228918 TMEM135Q86UB9 458 aa16.65■□□□□ 0.26
LTBR-201ENST00000228918 RNF169Q8NCN4 708 aa16.65■□□□□ 0.26
LTBR-201ENST00000228918 ACTRT2Q8TDY3 377 aa16.65■□□□□ 0.26
LTBR-201ENST00000228918 GTF3C2Q8WUA4 911 aaPredicted RBP16.65■□□□□ 0.26
LTBR-201ENST00000228918 KCTD13Q8WZ19 329 aa16.65■□□□□ 0.26
LTBR-201ENST00000228918 ATXN7L3BQ96GX2 97 aa16.65■□□□□ 0.26
LTBR-201ENST00000228918 AGAP3Q96P47 875 aa16.65■□□□□ 0.26
LTBR-201ENST00000228918 NR1H4Q96RI1 486 aaPredicted RBP16.65■□□□□ 0.26
LTBR-201ENST00000228918 VANGL2Q9ULK5 521 aa16.65■□□□□ 0.26
LTBR-201ENST00000228918 NRCAMQ92823 1304 aa16.64■□□□□ 0.25
LTBR-201ENST00000228918 ZCWPW2A0A1B0GU75 182 aa16.64■□□□□ 0.25
LTBR-201ENST00000228918 FAM72CH0Y354 149 aa16.64■□□□□ 0.25
LTBR-201ENST00000228918 USP12O75317 370 aa16.64■□□□□ 0.25
LTBR-201ENST00000228918 ZNF189O75820 626 aaPredicted RBP16.64■□□□□ 0.25
LTBR-201ENST00000228918 GTF2A2P52657 109 aa16.64■□□□□ 0.25
LTBR-201ENST00000228918 SLC5A9Q2M3M2 681 aa16.64■□□□□ 0.25
LTBR-201ENST00000228918 FAM72AQ5TYM5 149 aa16.64■□□□□ 0.25
LTBR-201ENST00000228918 FAM72DQ6L9T8 149 aa16.64■□□□□ 0.25
LTBR-201ENST00000228918 FSTL4Q6MZW2 842 aa16.64■□□□□ 0.25
LTBR-201ENST00000228918 HFE2Q6ZVN8 426 aa16.64■□□□□ 0.25
LTBR-201ENST00000228918 PAQR9Q6ZVX9 377 aa16.64■□□□□ 0.25
LTBR-201ENST00000228918 CLEC14AQ86T13 490 aa16.64■□□□□ 0.25
LTBR-201ENST00000228918 FAM72BQ86X60 149 aa16.64■□□□□ 0.25
LTBR-201ENST00000228918 TNS4Q8IZW8 715 aa16.64■□□□□ 0.25
LTBR-201ENST00000228918 CMTM5Q96DZ9 223 aa16.64■□□□□ 0.25
LTBR-201ENST00000228918 OXCT2Q9BYC2 517 aaPredicted RBP16.64■□□□□ 0.25
LTBR-201ENST00000228918 RNF39Q9H2S5 420 aa16.64■□□□□ 0.25
LTBR-201ENST00000228918 LRRC4Q9HBW1 653 aa16.64■□□□□ 0.25
LTBR-201ENST00000228918 CASS4Q9NQ75 786 aa16.64■□□□□ 0.25
LTBR-201ENST00000228918 PIN4Q9Y237 131 aaKnown RBP16.64■□□□□ 0.25
LTBR-201ENST00000228918 RTN3O95197 1032 aaPredicted RBP16.63■□□□□ 0.25
LTBR-201ENST00000228918 GNAT1P11488 350 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 ERCC2P18074 760 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 SEMA3BQ13214 749 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 SNAPC2Q13487 334 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 CLEC20AQ6ZU45 233 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 RAPH1Q70E73 1250 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 SIX6OS1Q8N1H7 587 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 TOP6BLQ8N6T0 577 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 PHC3Q8NDX5 983 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 PPP1R13LQ8WUF5 828 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 ZFAND2BQ8WV99 257 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 AGAP2Q99490 1192 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 SHCBP1LQ9BZQ2 653 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 CDH19Q9H159 772 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 CDH22Q9UJ99 828 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 CDY2AQ9Y6F7 541 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 CDY1Q9Y6F8 540 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 G3V2L1 256 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 SMIM24O75264 130 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 F7P08709 466 aaPredicted RBP16.63■□□□□ 0.25
LTBR-201ENST00000228918 ITGAXP20702 1163 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 ACAT1P24752 427 aaKnown RBP16.63■□□□□ 0.25
LTBR-201ENST00000228918 AXLP30530 894 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 ADRA1BP35368 520 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 EPHB1P54762 984 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 LILRA4P59901 499 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 CCNIQ14094 377 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 RNF220Q5VTB9 566 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 KCTD11Q693B1 232 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 EPGNQ6UW88 154 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 NAPRTQ6XQN6 538 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 DHDDSQ86SQ9 333 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 PHTF2Q8N3S3 785 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 GALNT15Q8N3T1 639 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 ZNF781Q8N8C0 355 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 TMEM40Q8WWA1 233 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 PYDC1Q8WXC3 89 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 AZIN2Q96A70 460 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 NTAN1Q96AB6 310 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 SLC9A7Q96T83 725 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 PPP1R12CQ9BZL4 782 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 ANLNQ9NQW6 1124 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 BFARQ9NZS9 450 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms