RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 P3H2Q8IVL5 708 aa18.8■□□□□ 0.6
CLIP2-201ENST00000223398 HSFY1Q96LI6 401 aa18.8■□□□□ 0.6
CLIP2-201ENST00000223398 SEPT4O43236 478 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 AMD1P17707 334 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 POU1F1P28069 291 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 RPS7P62081 194 aaKnown RBP18.79■□□□□ 0.6
CLIP2-201ENST00000223398 SPANXN3Q5MJ09 141 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 FAM35AQ86V20 835 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 INPP4AQ96PE3 977 aaPredicted RBP18.79■□□□□ 0.6
CLIP2-201ENST00000223398 MLPHQ9BV36 600 aaPredicted RBP18.79■□□□□ 0.6
CLIP2-201ENST00000223398 NLNQ9BYT8 704 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 ZFYVE1Q9HBF4 777 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 MID1IP1Q9NPA3 183 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 RAD54BQ9Y620 910 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 GSTM1P09488 218 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 KCNMA1Q12791 1236 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 MMRN1Q13201 1228 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 TUSC3Q13454 348 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 CRY1Q16526 586 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 GRTP1Q5TC63 336 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 C9orf57Q5W0N0 161 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 PDPK2PQ6A1A2 396 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 PANX3Q96QZ0 392 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 ASB8Q9H765 288 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 DNAJC18Q9H819 358 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 SOHLH2Q9NX45 425 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 NAALADL1Q9UQQ1 740 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 A0A096LPK6 155 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 NEDD8-MDP1E9PL57 170 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 GPR1P46091 355 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 SH3BP5LQ7L8J4 393 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 SLC22A9Q8IVM8 553 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 CATSPERZQ9NTU4 200 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 VPS51Q9UID3 782 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 ZBTB14O43829 449 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 MPOP05164 745 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 SMPD1P17405 629 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 DPYSL3Q14195 570 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 ATAD1Q8NBU5 361 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 ZNF143P52747 638 aaPredicted RBP18.79■□□□□ 0.6
CLIP2-201ENST00000223398 ACAP1Q15027 740 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 CFAP52Q8N1V2 620 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 ZNF557Q8N988 423 aaPredicted RBP18.79■□□□□ 0.6
CLIP2-201ENST00000223398 OR6K2Q8NGY2 324 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 ELMO1Q92556 727 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 TSC22D3Q99576 134 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 ARL15Q9NXU5 204 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 RAB23Q9ULC3 237 aa18.79■□□□□ 0.6
CLIP2-201ENST00000223398 FAM47E-STBD1D6RA91 191 aa18.78■□□□□ 0.6
CLIP2-201ENST00000223398 CTPS1P17812 591 aa18.78■□□□□ 0.6
CLIP2-201ENST00000223398 PSEN1P49768 467 aa18.78■□□□□ 0.6
CLIP2-201ENST00000223398 IRAK1P51617 712 aa18.78■□□□□ 0.6
CLIP2-201ENST00000223398 GPR158Q5T848 1215 aa18.78■□□□□ 0.6
CLIP2-201ENST00000223398 SUGP1Q8IWZ8 645 aaKnown RBP18.78■□□□□ 0.6
CLIP2-201ENST00000223398 MPP6Q9NZW5 540 aa18.78■□□□□ 0.6
CLIP2-201ENST00000223398 C1QTNF3-AMACRE9PGA6 284 aa18.78■□□□□ 0.6
CLIP2-201ENST00000223398 SLC9A5Q14940 896 aa18.78■□□□□ 0.6
CLIP2-201ENST00000223398 FOXR1Q6PIV2 292 aa18.78■□□□□ 0.6
CLIP2-201ENST00000223398 FUCA2Q9BTY2 467 aa18.78■□□□□ 0.6
CLIP2-201ENST00000223398 YIPF3Q9GZM5 350 aa18.78■□□□□ 0.6
CLIP2-201ENST00000223398 BRD9Q9H8M2 597 aa18.78■□□□□ 0.6
CLIP2-201ENST00000223398 DDX20Q9UHI6 824 aaKnown RBP18.78■□□□□ 0.6
CLIP2-201ENST00000223398 IGF2BP3O00425 579 aaKnown RBP eCLIP18.78■□□□□ 0.6
CLIP2-201ENST00000223398 PHGDHO43175 533 aaKnown RBP18.78■□□□□ 0.6
CLIP2-201ENST00000223398 SEC22BO75396 215 aa18.78■□□□□ 0.6
CLIP2-201ENST00000223398 AGKQ53H12 422 aa18.78■□□□□ 0.6
CLIP2-201ENST00000223398 CATSPER2Q96P56 530 aa18.78■□□□□ 0.6
CLIP2-201ENST00000223398 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.78■□□□□ 0.62e-6■■□□□ 12.7
CLIP2-201ENST00000223398 AHSPQ9NZD4 102 aa18.78■□□□□ 0.6
CLIP2-201ENST00000223398 WNT7AO00755 349 aa18.78■□□□□ 0.6
CLIP2-201ENST00000223398 GOT1P17174 413 aa18.78■□□□□ 0.6
CLIP2-201ENST00000223398 SLC24A5Q71RS6 500 aa18.78■□□□□ 0.6
CLIP2-201ENST00000223398 SH3RF1Q7Z6J0 888 aa18.78■□□□□ 0.6
CLIP2-201ENST00000223398 MILR1Q7Z6M3 343 aa18.78■□□□□ 0.6
CLIP2-201ENST00000223398 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.78■□□□□ 0.6
CLIP2-201ENST00000223398 CCT8L1PA6NM43 557 aa18.77■□□□□ 0.6
CLIP2-201ENST00000223398 DUSP11O75319 330 aaKnown RBP18.77■□□□□ 0.6
CLIP2-201ENST00000223398 RPN2P04844 631 aa18.77■□□□□ 0.6
CLIP2-201ENST00000223398 EIF2S1P05198 315 aaKnown RBP18.77■□□□□ 0.6
CLIP2-201ENST00000223398 HLA-DQA1Q5Y7H0 255 aa18.77■□□□□ 0.6
CLIP2-201ENST00000223398 HJURPQ8NCD3 748 aaPredicted RBP18.77■□□□□ 0.6
CLIP2-201ENST00000223398 GANQ9H2C0 597 aa18.77■□□□□ 0.6
CLIP2-201ENST00000223398 IMPAD1Q9NX62 359 aa18.77■□□□□ 0.6
CLIP2-201ENST00000223398 AKAP7Q9P0M2 348 aaPredicted RBP18.77■□□□□ 0.6
CLIP2-201ENST00000223398 CFAP97Q9P2B7 532 aa18.77■□□□□ 0.6
CLIP2-201ENST00000223398 SLC24A2Q9UI40 661 aa18.77■□□□□ 0.6
CLIP2-201ENST00000223398 KLRC4O43908 158 aa18.77■□□□□ 0.6
CLIP2-201ENST00000223398 THRAP10827 490 aa18.77■□□□□ 0.6
CLIP2-201ENST00000223398 NFKB1P19838 968 aa18.77■□□□□ 0.6
CLIP2-201ENST00000223398 CYLC2Q14093 348 aaPredicted RBP18.77■□□□□ 0.6
CLIP2-201ENST00000223398 CCDC81Q6ZN84 652 aa18.77■□□□□ 0.6
CLIP2-201ENST00000223398 FLCNQ8NFG4 579 aa18.77■□□□□ 0.6
CLIP2-201ENST00000223398 METTL6Q8TCB7 284 aa18.77■□□□□ 0.6
CLIP2-201ENST00000223398 MAGEB18Q96M61 343 aa18.77■□□□□ 0.6
CLIP2-201ENST00000223398 SEMA3CQ99985 751 aa18.77■□□□□ 0.6
CLIP2-201ENST00000223398 DPY30Q9C005 99 aa18.77■□□□□ 0.6
CLIP2-201ENST00000223398 EFCAB1Q9HAE3 211 aa18.77■□□□□ 0.6
CLIP2-201ENST00000223398 ETNK2Q9NVF9 386 aa18.77■□□□□ 0.6
CLIP2-201ENST00000223398 SOX13Q9UN79 622 aa18.77■□□□□ 0.6
CLIP2-201ENST00000223398 SIK3Q9Y2K2 1263 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms