RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 SMIM35A0A1B0GVV1 85 aa14.97□□□□□ -0.01
CNOT3-201ENST00000221232 E9PBE3 544 aa14.97□□□□□ -0.01
CNOT3-201ENST00000221232 KLHL41O60662 606 aa14.97□□□□□ -0.01
CNOT3-201ENST00000221232 DAB1O75553 588 aa14.97□□□□□ -0.01
CNOT3-201ENST00000221232 CPA3P15088 417 aa14.97□□□□□ -0.01
CNOT3-201ENST00000221232 ZBTB17Q13105 803 aa14.97□□□□□ -0.01
CNOT3-201ENST00000221232 BLMHQ13867 455 aa14.97□□□□□ -0.01
CNOT3-201ENST00000221232 TIFABQ6ZNK6 161 aa14.97□□□□□ -0.01
CNOT3-201ENST00000221232 BATF3Q9NR55 127 aa14.97□□□□□ -0.01
CNOT3-201ENST00000221232 COPG2Q9UBF2 871 aa14.97□□□□□ -0.01
CNOT3-201ENST00000221232 DCDC2Q9UHG0 476 aa14.97□□□□□ -0.01
CNOT3-201ENST00000221232 XPOTO43592 962 aaKnown RBP14.96□□□□□ -0.01
CNOT3-201ENST00000221232 CIB2O75838 187 aa14.96□□□□□ -0.01
CNOT3-201ENST00000221232 SMNDC1O75940 238 aaKnown RBP eCLIP14.96□□□□□ -0.012e-6■■□□□ 12.7
CNOT3-201ENST00000221232 PROCP04070 461 aa14.96□□□□□ -0.01
CNOT3-201ENST00000221232 SERPINA6P08185 405 aa14.96□□□□□ -0.01
CNOT3-201ENST00000221232 NFKB1P19838 968 aa14.96□□□□□ -0.01
CNOT3-201ENST00000221232 GP5P40197 560 aa14.96□□□□□ -0.01
CNOT3-201ENST00000221232 PNPLA4P41247 253 aa14.96□□□□□ -0.01
CNOT3-201ENST00000221232 GLUD2P49448 558 aa14.96□□□□□ -0.01
CNOT3-201ENST00000221232 PSEN2P49810 448 aa14.96□□□□□ -0.01
CNOT3-201ENST00000221232 IDH3AP50213 366 aa14.96□□□□□ -0.01
CNOT3-201ENST00000221232 DPYSQ14117 519 aa14.96□□□□□ -0.01
CNOT3-201ENST00000221232 GRB14Q14449 540 aa14.96□□□□□ -0.01
CNOT3-201ENST00000221232 TMEM154Q6P9G4 183 aa14.96□□□□□ -0.01
CNOT3-201ENST00000221232 NAPRTQ6XQN6 538 aa14.96□□□□□ -0.01
CNOT3-201ENST00000221232 LMNTD2Q8IXW0 634 aa14.96□□□□□ -0.01
CNOT3-201ENST00000221232 KBTBD2Q8IY47 623 aa14.96□□□□□ -0.01
CNOT3-201ENST00000221232 PYDC1Q8WXC3 89 aa14.96□□□□□ -0.01
CNOT3-201ENST00000221232 SORT1Q99523 831 aa14.96□□□□□ -0.01
CNOT3-201ENST00000221232 GORASP1Q9BQQ3 440 aa14.96□□□□□ -0.01
CNOT3-201ENST00000221232 NEMP1O14524 444 aa14.96□□□□□ -0.01
CNOT3-201ENST00000221232 DCLK1O15075 740 aa14.96□□□□□ -0.01
CNOT3-201ENST00000221232 F2P00734 622 aa14.96□□□□□ -0.01
CNOT3-201ENST00000221232 MLNP12872 115 aa14.96□□□□□ -0.01
CNOT3-201ENST00000221232 CD68P34810 354 aaPredicted RBP14.96□□□□□ -0.01
CNOT3-201ENST00000221232 RAPH1Q70E73 1250 aa14.96□□□□□ -0.01
CNOT3-201ENST00000221232 PSTKQ8IV42 348 aaKnown RBP14.96□□□□□ -0.01
CNOT3-201ENST00000221232 ARHGAP24Q8N264 748 aa14.96□□□□□ -0.01
CNOT3-201ENST00000221232 PHTF2Q8N3S3 785 aa14.96□□□□□ -0.01
CNOT3-201ENST00000221232 PNPLA1Q8N8W4 532 aa14.96□□□□□ -0.01
CNOT3-201ENST00000221232 SPATA22Q8NHS9 363 aa14.96□□□□□ -0.01
CNOT3-201ENST00000221232 TKTL2Q9H0I9 626 aa14.96□□□□□ -0.01
CNOT3-201ENST00000221232 TSPYL2Q9H2G4 693 aaPredicted RBP14.96□□□□□ -0.01
CNOT3-201ENST00000221232 BFARQ9NZS9 450 aa14.96□□□□□ -0.01
CNOT3-201ENST00000221232 SLC39A10Q9ULF5 831 aa14.96□□□□□ -0.01
CNOT3-201ENST00000221232 NUP205Q92621 2012 aa14.96□□□□□ -0.02
CNOT3-201ENST00000221232 A0A096LPK6 155 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 ZNF487B1APH4 448 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 DCXO43602 365 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 SIN3BO75182 1162 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 IL1BP01584 269 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 SERPINE1P05121 402 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 RPL34P49207 117 aaKnown RBP14.95□□□□□ -0.02
CNOT3-201ENST00000221232 ARHGAP36Q6ZRI8 547 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 ARCQ7LC44 396 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 EGFL6Q8IUX8 553 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 ZNF781Q8N8C0 355 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.95□□□□□ -0.02
CNOT3-201ENST00000221232 C3orf58Q8NDZ4 430 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 DDX50Q9BQ39 737 aaKnown RBP14.95□□□□□ -0.02
CNOT3-201ENST00000221232 FAM124BQ9H5Z6 455 aaPredicted RBP14.95□□□□□ -0.02
CNOT3-201ENST00000221232 WDCPQ9H6R7 721 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 WDR6Q9NNW5 1121 aaKnown RBP14.95□□□□□ -0.02
CNOT3-201ENST00000221232 MKS1Q9NXB0 559 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 DLGAP2Q9P1A6 1054 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 DFFAO00273 331 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 PHGDHO43175 533 aaKnown RBP14.95□□□□□ -0.02
CNOT3-201ENST00000221232 LTFP02788 710 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 KCNE1P15382 129 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 CNTFP26441 200 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 NMBRP28336 390 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 TUBB3Q13509 450 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 CFAP157Q5JU67 520 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 ZMIZ2Q8NF64 920 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 APBA2Q99767 749 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 SYT15Q9BQS2 421 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 ATXN3LQ9H3M9 355 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 DONSONQ9NYP3 566 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 OR12D3Q9UGF7 316 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 PPM1HQ9ULR3 514 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 PLA2G4CQ9UP65 541 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 TM7SF2O76062 418 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 LUC7L3O95232 432 aaKnown RBP14.95□□□□□ -0.02
CNOT3-201ENST00000221232 HSPA4LO95757 839 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 WARSP23381 471 aaKnown RBP14.95□□□□□ -0.02
CNOT3-201ENST00000221232 ABCE1P61221 599 aaKnown RBP14.95□□□□□ -0.02
CNOT3-201ENST00000221232 ANKRD20A4Q4UJ75 823 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 MLPHQ9BV36 600 aaPredicted RBP14.95□□□□□ -0.02
CNOT3-201ENST00000221232 LRRC40Q9H9A6 602 aa14.95□□□□□ -0.02
CNOT3-201ENST00000221232 MBLAC1A4D2B0 266 aaPredicted RBP14.94□□□□□ -0.02
CNOT3-201ENST00000221232 MT-CYBP00156 380 aaPredicted RBP14.94□□□□□ -0.02
CNOT3-201ENST00000221232 BDNFP23560 247 aa14.94□□□□□ -0.02
CNOT3-201ENST00000221232 DAOAP59103 153 aa14.94□□□□□ -0.02
CNOT3-201ENST00000221232 ZNF460Q14592 562 aa14.94□□□□□ -0.02
CNOT3-201ENST00000221232 PAFAH1B3Q15102 231 aaKnown RBP14.94□□□□□ -0.02
CNOT3-201ENST00000221232 TCHHL1Q5QJ38 904 aaPredicted RBP14.94□□□□□ -0.02
CNOT3-201ENST00000221232 PDPK2PQ6A1A2 396 aa14.94□□□□□ -0.02
CNOT3-201ENST00000221232 FAM35AQ86V20 835 aa14.94□□□□□ -0.02
CNOT3-201ENST00000221232 PPFIBP2Q8ND30 876 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms