RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 TEX264Q9Y6I9 313 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 LTBP3Q9NS15 1303 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 SCN9AQ15858 1988 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 E5RI56 91 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 CASQ2O14958 399 aaPredicted RBP12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 DDHD2O94830 711 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 TFE3P19532 575 aaPredicted RBP12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 ABCE1P61221 599 aaKnown RBP12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 ZNF618Q5T7W0 954 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 C16orf89Q6UX73 402 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 IFNEQ86WN2 208 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 EFCAB3Q8N7B9 438 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 SLC35F5Q8WV83 523 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 ZMAT2Q96NC0 199 aaKnown RBP12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 CATSPER2Q96P56 530 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 IL1RL2Q9HB29 575 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 SSU72Q9NP77 194 aaKnown RBP12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 TMPRSS4Q9NRS4 437 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 PNPOQ9NVS9 261 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 COL24A1Q17RW2 1714 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 IGKV6-21A0A0C4DH24 114 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 GCATO75600 419 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 PIGNO95427 931 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 PSMG1O95456 288 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 FAM187BQ17R55 369 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 ARCQ7LC44 396 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 FBXO32Q969P5 355 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 MFSD3Q96ES6 412 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 UBE2OQ9C0C9 1292 aaKnown RBP12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 IL22Q9GZX6 179 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 GPAMQ9HCL2 828 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 CNGB3Q9NQW8 809 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 NCKIPSDQ9NZQ3 722 aa12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 FARP1Q9Y4F1 1045 aaPredicted RBP12.61□□□□□ -0.39
TM9SF4-201ENST00000217315 MYBPHLA2RUH7 354 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 ZBTB48P10074 688 aaPredicted RBP12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 DPYSL2Q16555 572 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 AGAP9Q5VTM2 703 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 SYPL2Q5VXT5 272 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 TAS2R42Q7RTR8 314 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 ZNF567Q8N184 647 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 TOP6BLQ8N6T0 577 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 ACMSDQ8TDX5 336 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 PYDC1Q8WXC3 89 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 MYLPFQ96A32 169 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 VAT1Q99536 393 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 COLEC11Q9BWP8 271 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 CDHR5Q9HBB8 845 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 FETUBQ9UGM5 382 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 SNX10Q9Y5X0 201 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 GOLGA8CPA6NN73 597 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 ZBTB24O43167 697 aaPredicted RBP12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 MPOP05164 745 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 CD151P48509 253 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 DSG1Q02413 1049 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 INCA1Q0VD86 236 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 CTBP1Q13363 440 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 KCNJ11Q14654 390 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 PCBP1Q15365 356 aaKnown RBP eCLIP12.6□□□□□ -0.398e-9■■■■□ 19.4
TM9SF4-201ENST00000217315 FAM110CQ1W6H9 321 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 SPDYAQ5MJ70 313 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 MARC1Q5VT66 337 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 ARHGAP17Q68EM7 881 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 TIGD7Q6NT04 549 aaPredicted RBP12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 LRRC8BQ6P9F7 803 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 SPATA6LQ8N4H0 392 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 PQLC3Q8N755 202 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 USP13Q92995 863 aaPredicted RBP12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 GLT1D1Q96MS3 346 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 PGAP2Q9UHJ9 254 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 YJEFN3A6XGL0 299 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 E7ENQ6 273 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 TYROBPO43914 113 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 CCNB1P14635 433 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 CRHR1P34998 444 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 GABRB2P47870 512 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 MAPRE2Q15555 327 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 TMC7Q7Z402 723 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 BHMTQ93088 406 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 CLPTM1LQ96KA5 538 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 BRD8Q9H0E9 1235 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 PTPRHQ9HD43 1115 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 CHRAC1Q9NRG0 131 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 ZNF180Q9UJW8 692 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 AURKCQ9UQB9 309 aa12.6□□□□□ -0.39
TM9SF4-201ENST00000217315 SLC12A8A0AV02 714 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 ERI2A8K979 691 aaKnown RBP12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 NDUFS3O75489 264 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 UPP2O95045 317 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 C2P06681 752 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 CDK7P50613 346 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 CYLC2Q14093 348 aaPredicted RBP12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 TRIML2Q8N7C3 387 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 AZIN2Q96A70 460 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 OMDQ99983 421 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 CDH9Q9ULB4 789 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 HBS1LQ9Y450 684 aaKnown RBP12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 MFHAS1Q9Y4C4 1052 aa12.59□□□□□ -0.39
TM9SF4-201ENST00000217315 RNF103-CHMP3A0A140T963 221 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms