RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 ALG14Q96F25 216 aa22.82■■□□□ 1.24
VTI1B-201ENST00000216456 RPRD1AQ96P16 312 aaPredicted RBP22.82■■□□□ 1.24
VTI1B-201ENST00000216456 ZDHHC5Q9C0B5 715 aa22.82■■□□□ 1.24
VTI1B-201ENST00000216456 SIK2Q9H0K1 926 aa22.82■■□□□ 1.24
VTI1B-201ENST00000216456 SYNCQ9H7C4 482 aa22.82■■□□□ 1.24
VTI1B-201ENST00000216456 TM7SF3Q9NS93 570 aa22.82■■□□□ 1.24
VTI1B-201ENST00000216456 TAB2Q9NYJ8 693 aa22.82■■□□□ 1.24
VTI1B-201ENST00000216456 ITIH6Q6UXX5 1313 aa22.82■■□□□ 1.24
VTI1B-201ENST00000216456 WNT9AO14904 365 aa22.81■■□□□ 1.24
VTI1B-201ENST00000216456 CNTN5O94779 1100 aa22.81■■□□□ 1.24
VTI1B-201ENST00000216456 MOCS3O95396 460 aa22.81■■□□□ 1.24
VTI1B-201ENST00000216456 SRPRAP08240 638 aaKnown RBP22.81■■□□□ 1.24
VTI1B-201ENST00000216456 CYP11B1P15538 503 aa22.81■■□□□ 1.24
VTI1B-201ENST00000216456 SLC8A1P32418 973 aa22.81■■□□□ 1.24
VTI1B-201ENST00000216456 IL9RQ01113 521 aa22.81■■□□□ 1.24
VTI1B-201ENST00000216456 KLHDC7AQ5VTJ3 777 aa22.81■■□□□ 1.24
VTI1B-201ENST00000216456 KIAA0895LQ68EN5 471 aa22.81■■□□□ 1.24
VTI1B-201ENST00000216456 SLC26A9Q7LBE3 791 aa22.81■■□□□ 1.24
VTI1B-201ENST00000216456 SLCO6A1Q86UG4 719 aa22.81■■□□□ 1.24
VTI1B-201ENST00000216456 SLC6A18Q96N87 628 aa22.81■■□□□ 1.24
VTI1B-201ENST00000216456 PCED1AQ9H1Q7 454 aa22.81■■□□□ 1.24
VTI1B-201ENST00000216456 SGK2Q9HBY8 427 aa22.81■■□□□ 1.24
VTI1B-201ENST00000216456 SLC12A6Q9UHW9 1150 aa22.81■■□□□ 1.24
VTI1B-201ENST00000216456 PCOLCE2Q9UKZ9 415 aa22.81■■□□□ 1.24
VTI1B-201ENST00000216456 ZMIZ1Q9ULJ6 1067 aa22.81■■□□□ 1.24
VTI1B-201ENST00000216456 ANKRD6Q9Y2G4 727 aa22.81■■□□□ 1.24
VTI1B-201ENST00000216456 EDDM13A0A1B0GTR0 161 aa22.8■■□□□ 1.24
VTI1B-201ENST00000216456 A0A1B0GVM2 712 aa22.8■■□□□ 1.24
VTI1B-201ENST00000216456 TCAF2A6NFQ2 919 aa22.8■■□□□ 1.24
VTI1B-201ENST00000216456 FTH1P19P0C7X4 201 aa22.8■■□□□ 1.24
VTI1B-201ENST00000216456 CD27P26842 260 aa22.8■■□□□ 1.24
VTI1B-201ENST00000216456 ERCC5P28715 1186 aaPredicted RBP22.8■■□□□ 1.24
VTI1B-201ENST00000216456 AFF3P51826 1226 aaKnown RBP22.8■■□□□ 1.24
VTI1B-201ENST00000216456 ARID5BQ14865 1188 aa22.8■■□□□ 1.24
VTI1B-201ENST00000216456 POM121L1PQ3SYA9 428 aa22.8■■□□□ 1.24
VTI1B-201ENST00000216456 RNF219Q5W0B1 726 aaPredicted RBP22.8■■□□□ 1.24
VTI1B-201ENST00000216456 TRNP1Q6NT89 227 aa22.8■■□□□ 1.24
VTI1B-201ENST00000216456 NOP9Q86U38 636 aaKnown RBP22.8■■□□□ 1.24
VTI1B-201ENST00000216456 FAM114A1Q8IWE2 563 aa22.8■■□□□ 1.24
VTI1B-201ENST00000216456 FRS2Q8WU20 508 aa22.8■■□□□ 1.24
VTI1B-201ENST00000216456 NOX5Q96PH1 765 aa22.8■■□□□ 1.24
VTI1B-201ENST00000216456 NPY6RQ99463 290 aa22.8■■□□□ 1.24
VTI1B-201ENST00000216456 NAA15Q9BXJ9 866 aaKnown RBP22.8■■□□□ 1.24
VTI1B-201ENST00000216456 NCKAP1Q9Y2A7 1128 aa22.8■■□□□ 1.24
VTI1B-201ENST00000216456 PCDHB9Q9Y5E1 797 aa22.8■■□□□ 1.24
VTI1B-201ENST00000216456 TARSL2A2RTX5 802 aaKnown RBP22.79■■□□□ 1.24
VTI1B-201ENST00000216456 RNASEH1O60930 286 aaKnown RBP22.79■■□□□ 1.24
VTI1B-201ENST00000216456 CER1O95813 267 aa22.79■■□□□ 1.24
VTI1B-201ENST00000216456 WNT1P04628 370 aa22.79■■□□□ 1.24
VTI1B-201ENST00000216456 NOS2P35228 1153 aa22.79■■□□□ 1.24
VTI1B-201ENST00000216456 SULT1E1P49888 294 aa22.79■■□□□ 1.24
VTI1B-201ENST00000216456 ALFQ53S48 1182 aa22.79■■□□□ 1.24
VTI1B-201ENST00000216456 RABGAP1LQ5R372 815 aa22.79■■□□□ 1.24
VTI1B-201ENST00000216456 USP30Q70CQ3 517 aa22.79■■□□□ 1.24
VTI1B-201ENST00000216456 KDM1BQ8NB78 822 aa22.79■■□□□ 1.24
VTI1B-201ENST00000216456 TBCBQ99426 244 aa22.79■■□□□ 1.24
VTI1B-201ENST00000216456 OMDQ99983 421 aa22.79■■□□□ 1.24
VTI1B-201ENST00000216456 PDCL3Q9H2J4 239 aa22.79■■□□□ 1.24
VTI1B-201ENST00000216456 LMBRD1Q9NUN5 540 aa22.79■■□□□ 1.24
VTI1B-201ENST00000216456 SARDHQ9UL12 918 aa22.79■■□□□ 1.24
VTI1B-201ENST00000216456 OR51B4Q9Y5P0 310 aa22.79■■□□□ 1.24
VTI1B-201ENST00000216456 PLXNA2O75051 1894 aa22.79■■□□□ 1.24
VTI1B-201ENST00000216456 TMEM131Q92545 1883 aa22.79■■□□□ 1.24
VTI1B-201ENST00000216456 H0Y8X5 98 aa22.78■■□□□ 1.24
VTI1B-201ENST00000216456 IL1BP01584 269 aa22.78■■□□□ 1.24
VTI1B-201ENST00000216456 MMEP08473 750 aa22.78■■□□□ 1.24
VTI1B-201ENST00000216456 SLC2A3P11169 496 aa22.78■■□□□ 1.24
VTI1B-201ENST00000216456 PPP2CBP62714 309 aa22.78■■□□□ 1.24
VTI1B-201ENST00000216456 PPP2CAP67775 309 aa22.78■■□□□ 1.24
VTI1B-201ENST00000216456 RAB6CQ53S08 254 aa22.78■■□□□ 1.24
VTI1B-201ENST00000216456 TCP11X2Q5H9J9 407 aa22.78■■□□□ 1.24
VTI1B-201ENST00000216456 RAB44Q7Z6P3 723 aaPredicted RBP22.78■■□□□ 1.24
VTI1B-201ENST00000216456 PHLDB2Q86SQ0 1253 aa22.78■■□□□ 1.24
VTI1B-201ENST00000216456 XYLT1Q86Y38 959 aa22.78■■□□□ 1.24
VTI1B-201ENST00000216456 MARCH9Q86YJ5 346 aa22.78■■□□□ 1.24
VTI1B-201ENST00000216456 ZNF397Q8NF99 534 aaPredicted RBP22.78■■□□□ 1.24
VTI1B-201ENST00000216456 FEM1AQ9BSK4 669 aa22.78■■□□□ 1.24
VTI1B-201ENST00000216456 TKTL2Q9H0I9 626 aa22.78■■□□□ 1.24
VTI1B-201ENST00000216456 RAB6CQ9H0N0 254 aa22.78■■□□□ 1.24
VTI1B-201ENST00000216456 NEUROG3Q9Y4Z2 214 aa22.78■■□□□ 1.24
VTI1B-201ENST00000216456 GOLGA8SH3BPF8 625 aa22.77■■□□□ 1.24
VTI1B-201ENST00000216456 SNAP91O60641 907 aa22.77■■□□□ 1.24
VTI1B-201ENST00000216456 UCHL3P15374 230 aa22.77■■□□□ 1.24
VTI1B-201ENST00000216456 CDH5P33151 784 aaPredicted RBP22.77■■□□□ 1.24
VTI1B-201ENST00000216456 DRD3P35462 400 aa22.77■■□□□ 1.24
VTI1B-201ENST00000216456 FLT3P36888 993 aa22.77■■□□□ 1.24
VTI1B-201ENST00000216456 PLK1P53350 603 aa22.77■■□□□ 1.24
VTI1B-201ENST00000216456 ARTNQ5T4W7 220 aa22.77■■□□□ 1.24
VTI1B-201ENST00000216456 FAM102AQ5T9C2 384 aaPredicted RBP22.77■■□□□ 1.24
VTI1B-201ENST00000216456 ZNF683Q8IZ20 524 aa22.77■■□□□ 1.24
VTI1B-201ENST00000216456 TMEM35BQ8NCS4 154 aa22.77■■□□□ 1.24
VTI1B-201ENST00000216456 OR14C36Q8NHC7 312 aa22.77■■□□□ 1.24
VTI1B-201ENST00000216456 SLC20A1Q8WUM9 679 aa22.77■■□□□ 1.24
VTI1B-201ENST00000216456 CPA5Q8WXQ8 436 aa22.77■■□□□ 1.24
VTI1B-201ENST00000216456 VPS16Q9H269 839 aa22.77■■□□□ 1.24
VTI1B-201ENST00000216456 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.77■■□□□ 1.24
VTI1B-201ENST00000216456 FREM2Q5SZK8 3169 aa22.77■■□□□ 1.23
VTI1B-201ENST00000216456 A0A1W2PPC4 97 aa22.76■■□□□ 1.23
VTI1B-201ENST00000216456 GOLGA8CPA6NN73 597 aa22.76■■□□□ 1.23
VTI1B-201ENST00000216456 C10orf142B7Z368 130 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms