RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 PPP1R13BQ96KQ4 1090 aa15.48■□□□□ 0.07
UPK3A-201ENST00000216211 SLC2A13Q96QE2 648 aa15.48■□□□□ 0.07
UPK3A-201ENST00000216211 FAM129BQ96TA1 746 aa15.48■□□□□ 0.07
UPK3A-201ENST00000216211 DDIT4Q9NX09 232 aa15.48■□□□□ 0.07
UPK3A-201ENST00000216211 SLC12A6Q9UHW9 1150 aa15.48■□□□□ 0.07
UPK3A-201ENST00000216211 PCDHGC3Q9UN70 934 aa15.48■□□□□ 0.07
UPK3A-201ENST00000216211 APOBEC2Q9Y235 224 aaKnown RBP15.48■□□□□ 0.07
UPK3A-201ENST00000216211 BTBD3Q9Y2F9 522 aa15.48■□□□□ 0.07
UPK3A-201ENST00000216211 PCDHGB2Q9Y5G2 931 aa15.48■□□□□ 0.07
UPK3A-201ENST00000216211 FREM2Q5SZK8 3169 aa15.47■□□□□ 0.07
UPK3A-201ENST00000216211 CACNA1GO43497 2377 aa15.47■□□□□ 0.07
UPK3A-201ENST00000216211 GTPBP10A4D1E9 387 aaKnown RBP15.47■□□□□ 0.07
UPK3A-201ENST00000216211 H0Y8X5 98 aa15.47■□□□□ 0.07
UPK3A-201ENST00000216211 PNMA6AP0CW24 399 aaPredicted RBP15.47■□□□□ 0.07
UPK3A-201ENST00000216211 PDGFRAP16234 1089 aa15.47■□□□□ 0.07
UPK3A-201ENST00000216211 ABCB4P21439 1286 aa15.47■□□□□ 0.07
UPK3A-201ENST00000216211 MZF1P28698 734 aaPredicted RBP15.47■□□□□ 0.07
UPK3A-201ENST00000216211 SLC8A1P32418 973 aa15.47■□□□□ 0.07
UPK3A-201ENST00000216211 PSMD8P48556 350 aa15.47■□□□□ 0.07
UPK3A-201ENST00000216211 CDK17Q00537 523 aa15.47■□□□□ 0.07
UPK3A-201ENST00000216211 EFHC1Q5JVL4 640 aa15.47■□□□□ 0.07
UPK3A-201ENST00000216211 OR6B2Q6IFH4 312 aa15.47■□□□□ 0.07
UPK3A-201ENST00000216211 STK40Q8N2I9 435 aa15.47■□□□□ 0.07
UPK3A-201ENST00000216211 C1orf131Q8NDD1 294 aaKnown RBP15.47■□□□□ 0.07
UPK3A-201ENST00000216211 PTPRN2Q92932 1015 aa15.47■□□□□ 0.07
UPK3A-201ENST00000216211 SLC6A18Q96N87 628 aa15.47■□□□□ 0.07
UPK3A-201ENST00000216211 OMDQ99983 421 aa15.47■□□□□ 0.07
UPK3A-201ENST00000216211 EBF2Q9HAK2 575 aa15.47■□□□□ 0.07
UPK3A-201ENST00000216211 SIX2Q9NPC8 291 aa15.47■□□□□ 0.07
UPK3A-201ENST00000216211 ASNSD1Q9NWL6 643 aa15.47■□□□□ 0.07
UPK3A-201ENST00000216211 A0A1W2PPC4 97 aa15.46■□□□□ 0.07
UPK3A-201ENST00000216211 LRRC72A6NJI9 287 aa15.46■□□□□ 0.07
UPK3A-201ENST00000216211 GOLGA8CPA6NN73 597 aa15.46■□□□□ 0.07
UPK3A-201ENST00000216211 HSF2BPO75031 334 aa15.46■□□□□ 0.07
UPK3A-201ENST00000216211 ERBB2P04626 1255 aa15.46■□□□□ 0.07
UPK3A-201ENST00000216211 GLI1P08151 1106 aa15.46■□□□□ 0.07
UPK3A-201ENST00000216211 ATXN1LP0C7T5 689 aaKnown RBP15.46■□□□□ 0.07
UPK3A-201ENST00000216211 SLC2A3P11169 496 aa15.46■□□□□ 0.07
UPK3A-201ENST00000216211 VAV1P15498 845 aa15.46■□□□□ 0.07
UPK3A-201ENST00000216211 CCR1P32246 355 aa15.46■□□□□ 0.07
UPK3A-201ENST00000216211 CTSKP43235 329 aa15.46■□□□□ 0.07
UPK3A-201ENST00000216211 IL9RQ01113 521 aa15.46■□□□□ 0.07
UPK3A-201ENST00000216211 CENPCQ03188 943 aa15.46■□□□□ 0.07
UPK3A-201ENST00000216211 PTK2Q05397 1052 aa15.46■□□□□ 0.07
UPK3A-201ENST00000216211 SFSWAPQ12872 951 aaKnown RBP15.46■□□□□ 0.07
UPK3A-201ENST00000216211 NME3Q13232 169 aa15.46■□□□□ 0.07
UPK3A-201ENST00000216211 SLC12A1Q13621 1099 aa15.46■□□□□ 0.07
UPK3A-201ENST00000216211 SUZ12Q15022 739 aaKnown RBP15.46■□□□□ 0.07
UPK3A-201ENST00000216211 TPD52L1Q16890 204 aaPredicted RBP15.46■□□□□ 0.07
UPK3A-201ENST00000216211 RABGAP1LQ5R372 815 aa15.46■□□□□ 0.07
UPK3A-201ENST00000216211 CXorf57Q6NSI4 855 aaKnown RBP15.46■□□□□ 0.07
UPK3A-201ENST00000216211 FBXL22Q6P050 247 aa15.46■□□□□ 0.07
UPK3A-201ENST00000216211 AADATQ8N5Z0 425 aa15.46■□□□□ 0.07
UPK3A-201ENST00000216211 OR2T34Q8NGX1 318 aa15.46■□□□□ 0.07
UPK3A-201ENST00000216211 IGSF8Q969P0 613 aa15.46■□□□□ 0.07
UPK3A-201ENST00000216211 PLCB1Q9NQ66 1216 aa15.46■□□□□ 0.07
UPK3A-201ENST00000216211 TOR4AQ9NXH8 423 aa15.46■□□□□ 0.07
UPK3A-201ENST00000216211 ADAMTS1Q9UHI8 967 aa15.46■□□□□ 0.07
UPK3A-201ENST00000216211 DNAJC12Q9UKB3 198 aa15.46■□□□□ 0.07
UPK3A-201ENST00000216211 FZD4Q9ULV1 537 aa15.46■□□□□ 0.07
UPK3A-201ENST00000216211 DOCK4Q8N1I0 1966 aa15.45■□□□□ 0.06
UPK3A-201ENST00000216211 DSPP15924 2871 aaKnown RBP15.45■□□□□ 0.06
UPK3A-201ENST00000216211 A0A1B0GVM2 712 aa15.45■□□□□ 0.06
UPK3A-201ENST00000216211 TCAF2A6NFQ2 919 aa15.45■□□□□ 0.06
UPK3A-201ENST00000216211 FOXN3O00409 490 aaPredicted RBP15.45■□□□□ 0.06
UPK3A-201ENST00000216211 DAB1O75553 588 aa15.45■□□□□ 0.06
UPK3A-201ENST00000216211 ADH1BP00325 375 aa15.45■□□□□ 0.06
UPK3A-201ENST00000216211 IL1BP01584 269 aa15.45■□□□□ 0.06
UPK3A-201ENST00000216211 CLCN1P35523 988 aa15.45■□□□□ 0.06
UPK3A-201ENST00000216211 KRT9P35527 623 aa15.45■□□□□ 0.06
UPK3A-201ENST00000216211 GGCXP38435 758 aa15.45■□□□□ 0.06
UPK3A-201ENST00000216211 NNMTP40261 264 aa15.45■□□□□ 0.06
UPK3A-201ENST00000216211 CCT8P50990 548 aa15.45■□□□□ 0.06
UPK3A-201ENST00000216211 IRAK1P51617 712 aa15.45■□□□□ 0.06
UPK3A-201ENST00000216211 PLK1P53350 603 aa15.45■□□□□ 0.06
UPK3A-201ENST00000216211 C21orf59P57076 290 aa15.45■□□□□ 0.06
UPK3A-201ENST00000216211 RACK1P63244 317 aaKnown RBP15.45■□□□□ 0.06
UPK3A-201ENST00000216211 TYRO3Q06418 890 aa15.45■□□□□ 0.06
UPK3A-201ENST00000216211 TTC39BQ5VTQ0 682 aaPredicted RBP15.45■□□□□ 0.06
UPK3A-201ENST00000216211 SASS6Q6UVJ0 657 aa15.45■□□□□ 0.06
UPK3A-201ENST00000216211 OLFML1Q6UWY5 402 aa15.45■□□□□ 0.06
UPK3A-201ENST00000216211 C11orf57Q6ZUT1 292 aaPredicted RBP15.45■□□□□ 0.06
UPK3A-201ENST00000216211 SND1Q7KZF4 910 aaKnown RBP eCLIP15.45■□□□□ 0.06
UPK3A-201ENST00000216211 SLC47A2Q86VL8 602 aa15.45■□□□□ 0.06
UPK3A-201ENST00000216211 RPRD1AQ96P16 312 aaPredicted RBP15.45■□□□□ 0.06
UPK3A-201ENST00000216211 NOX5Q96PH1 765 aa15.45■□□□□ 0.06
UPK3A-201ENST00000216211 CDC6Q99741 560 aa15.45■□□□□ 0.06
UPK3A-201ENST00000216211 ACE2Q9BYF1 805 aaPredicted RBP15.45■□□□□ 0.06
UPK3A-201ENST00000216211 VANGL2Q9ULK5 521 aa15.45■□□□□ 0.06
UPK3A-201ENST00000216211 TAF4O00268 1085 aa15.44■□□□□ 0.06
UPK3A-201ENST00000216211 VILLO15195 856 aa15.44■□□□□ 0.06
UPK3A-201ENST00000216211 WNT1P04628 370 aa15.44■□□□□ 0.06
UPK3A-201ENST00000216211 GOT1P17174 413 aa15.44■□□□□ 0.06
UPK3A-201ENST00000216211 C5AR1P21730 350 aa15.44■□□□□ 0.06
UPK3A-201ENST00000216211 METAP1P53582 386 aa15.44■□□□□ 0.06
UPK3A-201ENST00000216211 ADPRHP54922 357 aa15.44■□□□□ 0.06
UPK3A-201ENST00000216211 SLC6A3Q01959 620 aa15.44■□□□□ 0.06
UPK3A-201ENST00000216211 SULT2A1Q06520 285 aa15.44■□□□□ 0.06
UPK3A-201ENST00000216211 SCAPQ12770 1279 aa15.44■□□□□ 0.06
UPK3A-201ENST00000216211 AUHQ13825 339 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms