RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 GRK3P35626 688 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 MAGEA8P43361 318 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 RGS4P49798 205 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 GMPSP49915 693 aaPredicted RBP10.63□□□□□ -0.71
VCL-201ENST00000211998 CSNK2BP67870 215 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 WDR59Q6PJI9 974 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 ZNF662Q6ZS27 426 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 ZFAND2BQ8WV99 257 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 ZNF512Q96ME7 567 aaPredicted RBP10.63□□□□□ -0.71
VCL-201ENST00000211998 DUSP9Q99956 384 aaKnown RBP10.63□□□□□ -0.71
VCL-201ENST00000211998 SH3BP1Q9Y3L3 701 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 CCL15-CCL14A0A0B4J2E2 113 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 RGSL1A5PLK6 1076 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 PRR5-ARHGAP8B1AHC4 643 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 KATNA1O75449 491 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 FAM86B2P0C5J1 330 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 CYP11B2P19099 503 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 RPL14P50914 215 aaKnown RBP10.63□□□□□ -0.71
VCL-201ENST00000211998 RPS7P62081 194 aaKnown RBP10.63□□□□□ -0.71
VCL-201ENST00000211998 ARHGAP8P85298 464 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 IL18R1Q13478 541 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 CCL15Q16663 113 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 KCTD19Q17RG1 926 aaPredicted RBP10.63□□□□□ -0.71
VCL-201ENST00000211998 RUNDC3AQ59EK9 446 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 MOXD1Q6UVY6 613 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 RAB43Q86YS6 212 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 GALNT6Q8NCL4 622 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 TBATAQ96M53 351 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 MBOAT7Q96N66 472 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 ZNF570Q96NI8 536 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 MUC3BQ9H195 1237 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 PRKAG3Q9UGI9 489 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 RAPGEFL1Q9UHV5 662 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 DCDC2CA8MYV0 355 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 TM7SF2O76062 418 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 ITGAXP20702 1163 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 CHKAP35790 457 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 TAF6P49848 677 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 TNK2Q07912 1038 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 SMU1Q2TAY7 513 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 PLA2G4FQ68DD2 849 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 PHF21BQ96EK2 531 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 KCNH7Q9NS40 1196 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 PSMD12O00232 456 aaPredicted RBP10.63□□□□□ -0.71
VCL-201ENST00000211998 PLOD3O60568 738 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 RPLP2P05387 115 aaKnown RBP10.63□□□□□ -0.71
VCL-201ENST00000211998 DPYSQ14117 519 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 FRG1Q14331 258 aaKnown RBP10.63□□□□□ -0.71
VCL-201ENST00000211998 MTX3Q5HYI7 312 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 ANO7Q6IWH7 933 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 EIF3MQ7L2H7 374 aaKnown RBP10.63□□□□□ -0.71
VCL-201ENST00000211998 PDPRQ8NCN5 879 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 SLC7A14Q8TBB6 771 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 PABPC5Q96DU9 382 aaKnown RBP10.63□□□□□ -0.71
VCL-201ENST00000211998 PCYOX1Q9UHG3 505 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 DNPEPQ9ULA0 475 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 UBQLN1Q9UMX0 589 aaKnown RBP10.63□□□□□ -0.71
VCL-201ENST00000211998 CEP152O94986 1710 aa10.63□□□□□ -0.71
VCL-201ENST00000211998 ICAM1P05362 532 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 PDGFRBP09619 1106 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 MLNP12872 115 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 WARSP23381 471 aaKnown RBP10.62□□□□□ -0.71
VCL-201ENST00000211998 KPNA1P52294 538 aaPredicted RBP10.62□□□□□ -0.71
VCL-201ENST00000211998 PRKAA2P54646 552 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 GRTP1Q5TC63 336 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 BTN2A1Q7KYR7 527 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 SEPT5Q99719 369 aaPredicted RBP10.62□□□□□ -0.71
VCL-201ENST00000211998 KLHL1Q9NR64 748 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 VPS9D1Q9Y2B5 631 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 A0A096LPK6 155 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 CLDN25C9JDP6 229 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 CPSF4O95639 269 aaKnown RBP10.62□□□□□ -0.71
VCL-201ENST00000211998 SLC2A3P11169 496 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 CYP2B6P20813 491 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 GP5P40197 560 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 RAB25P57735 213 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 GOLGA7BQ2TAP0 167 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 ERICH5Q6P6B1 374 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 TMC7Q7Z402 723 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 TAF8Q7Z7C8 310 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 SLC22A9Q8IVM8 553 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 RBM15BQ8NDT2 890 aaKnown RBP10.62□□□□□ -0.71
VCL-201ENST00000211998 PTCD3Q96EY7 689 aaKnown RBP10.62□□□□□ -0.71
VCL-201ENST00000211998 RGS18Q9NS28 235 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 HAT1O14929 419 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 AKAP3O75969 853 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 PIGNO95427 931 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 DRG2P55039 364 aaKnown RBP10.62□□□□□ -0.71
VCL-201ENST00000211998 CUL2Q13617 745 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 SLC9A4Q6AI14 798 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 ADHFE1Q8IWW8 467 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 KIAA0895Q8NCT3 520 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 HSPBAP1Q96EW2 488 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 SLITRK1Q96PX8 696 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 TOR3AQ9H497 397 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 SPAG4Q9NPE6 437 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 PFDN2Q9UHV9 154 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 SETD1BQ9UPS6 1966 aaKnown RBP10.62□□□□□ -0.71
VCL-201ENST00000211998 MYO3AQ8NEV4 1616 aa10.62□□□□□ -0.71
VCL-201ENST00000211998 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms