RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 LRRTM3Q86VH5 581 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 UNC5BQ8IZJ1 945 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 KIF2BQ8N4N8 673 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 STKLD1Q8NE28 680 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 FUBP3Q96I24 572 aaKnown RBP eCLIP8.45□□□□□ -1.066e-11■■■■□ 23.1
VAMP3-201ENST00000054666 CELF6Q96J87 481 aaKnown RBP8.45□□□□□ -1.06
VAMP3-201ENST00000054666 TEKT5Q96M29 485 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 C7orf26Q96N11 449 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 PPP1R2P1Q96PQ5 205 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 IL22Q9GZX6 179 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 CASS4Q9NQ75 786 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 BAIAP2L1Q9UHR4 511 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 FRMPD3Q5JV73 1810 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 ATP9BO43861 1147 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 USP12O75317 370 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 HAUS5O94927 633 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 ATP6V1G2O95670 118 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 JCHAINP01591 159 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 AMHP03971 560 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 HOXD11P31277 338 aaPredicted RBP8.45□□□□□ -1.06
VAMP3-201ENST00000054666 SLC8A1P32418 973 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 NPY2RP49146 381 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 SERPINB8P50452 374 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 CDH17Q12864 832 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 PPP2R5DQ14738 602 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 TAF1BQ53T94 588 aaPredicted RBP8.45□□□□□ -1.06
VAMP3-201ENST00000054666 STXBP5Q5T5C0 1151 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 GRTP1Q5TC63 336 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 TIGD7Q6NT04 549 aaPredicted RBP8.45□□□□□ -1.06
VAMP3-201ENST00000054666 CRLF3Q8IUI8 442 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 ABI1Q8IZP0 508 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 ARHGAP18Q8N392 663 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 ANKLE1Q8NAG6 615 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 RFWD2Q8NHY2 731 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 RAET1EQ8TD07 263 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 INPP5DQ92835 1189 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 MECRQ9BV79 373 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 TMEM120AQ9BXJ8 343 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 FTHL17Q9BXU8 183 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 LRMDAQ9H2I8 198 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 FBXO44Q9H4M3 255 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 ARHGEF3Q9NR81 526 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 RNF186Q9NXI6 227 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 SIRPGQ9P1W8 387 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 SLC17A6Q9P2U8 582 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 SRRDQ9UH36 339 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 ADAM28Q9UKQ2 775 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 STK38LQ9Y2H1 464 aa8.45□□□□□ -1.06
VAMP3-201ENST00000054666 PRG3Q9Y2Y8 225 aaPredicted RBP8.45□□□□□ -1.06
VAMP3-201ENST00000054666 AAR2Q9Y312 384 aaKnown RBP8.45□□□□□ -1.06
VAMP3-201ENST00000054666 FAM237BA0A1B0GVD1 139 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 MAGEB16A2A368 324 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 HMX2A2RU54 273 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 F8W810 466 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 MSI1O43347 362 aaKnown RBP8.44□□□□□ -1.06
VAMP3-201ENST00000054666 PAGE1O75459 146 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 ANXA9O76027 345 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 MOCS2O96007 188 aaPredicted RBP8.44□□□□□ -1.06
VAMP3-201ENST00000054666 BPGMP07738 259 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 OR4Q2P0C623 313 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 ERVK-10P10266 1014 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 CCNCP24863 283 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 TYK2P29597 1187 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 HOXC13P31276 330 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 CD68P34810 354 aaPredicted RBP8.44□□□□□ -1.06
VAMP3-201ENST00000054666 SPRP35270 261 aaPredicted RBP8.44□□□□□ -1.06
VAMP3-201ENST00000054666 DSC1Q08554 894 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 BST1Q10588 318 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 FRG1Q14331 258 aaKnown RBP8.44□□□□□ -1.06
VAMP3-201ENST00000054666 CLLU1OSQ5K130 101 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 KCTD11Q693B1 232 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 CES3Q6UWW8 571 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 ASRGL1Q7L266 308 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 CLNKQ7Z7G1 428 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 MTDHQ86UE4 582 aaKnown RBP8.44□□□□□ -1.06
VAMP3-201ENST00000054666 USP33Q8TEY7 942 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 TUBB6Q9BUF5 446 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 ZCWPW1Q9H0M4 648 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 STARD7Q9NQZ5 370 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 SAR1AQ9NR31 198 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 DCDC2Q9UHG0 476 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 SFMBT1Q9UHJ3 866 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 A0A1W2PQH9 124 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 TNFRSF10BO14763 440 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 SYN3O14994 580 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 TADA2AO75478 443 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 ALDOAP04075 364 aaKnown RBP8.44□□□□□ -1.06
VAMP3-201ENST00000054666 KRT16P08779 473 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 SLC2A3P11169 496 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 OLIG2Q13516 323 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 RIPK1Q13546 671 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 SMAD1Q15797 465 aaKnown RBP8.44□□□□□ -1.06
VAMP3-201ENST00000054666 ANO4Q32M45 955 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 N4BP2L1Q5TBK1 243 aaPredicted RBP8.44□□□□□ -1.06
VAMP3-201ENST00000054666 MAP3K21Q5TCX8 1036 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 ZNF280DQ6N043 979 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 TMEM135Q86UB9 458 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 KCNMB4Q86W47 210 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 ZNF280BQ86YH2 543 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 COLGALT2Q8IYK4 626 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms