RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 URB1O60287 2271 aaKnown RBP16.38■□□□□ 0.21
ERCC1-201ENST00000013807 A0A1B0GVM2 712 aa16.38■□□□□ 0.21
ERCC1-201ENST00000013807 TCAF2A6NFQ2 919 aa16.38■□□□□ 0.21
ERCC1-201ENST00000013807 LRRC72A6NJI9 287 aa16.38■□□□□ 0.21
ERCC1-201ENST00000013807 F5H5T6 163 aa16.38■□□□□ 0.21
ERCC1-201ENST00000013807 TAF4O00268 1085 aa16.38■□□□□ 0.21
ERCC1-201ENST00000013807 MID1O15344 667 aa16.38■□□□□ 0.21
ERCC1-201ENST00000013807 FSBPO95073 299 aa16.38■□□□□ 0.21
ERCC1-201ENST00000013807 ADH1BP00325 375 aa16.38■□□□□ 0.21
ERCC1-201ENST00000013807 SLC8A1P32418 973 aa16.38■□□□□ 0.21
ERCC1-201ENST00000013807 SNX16P57768 344 aa16.38■□□□□ 0.21
ERCC1-201ENST00000013807 PTK2Q05397 1052 aa16.38■□□□□ 0.21
ERCC1-201ENST00000013807 KCNJ12Q14500 433 aa16.38■□□□□ 0.21
ERCC1-201ENST00000013807 ELAVL3Q14576 367 aaKnown RBP16.38■□□□□ 0.21
ERCC1-201ENST00000013807 KCNT1Q5JUK3 1230 aa16.38■□□□□ 0.21
ERCC1-201ENST00000013807 DPY19L2P1Q6NXN4 242 aa16.38■□□□□ 0.21
ERCC1-201ENST00000013807 SLC26A9Q7LBE3 791 aa16.38■□□□□ 0.21
ERCC1-201ENST00000013807 MMAAQ8IVH4 418 aaKnown RBP16.38■□□□□ 0.21
ERCC1-201ENST00000013807 DEFB106AQ8N104 65 aa16.38■□□□□ 0.21
ERCC1-201ENST00000013807 CCAR2Q8N163 923 aaKnown RBP16.38■□□□□ 0.21
ERCC1-201ENST00000013807 OR2T34Q8NGX1 318 aa16.38■□□□□ 0.21
ERCC1-201ENST00000013807 RHBDD1Q8TEB9 315 aa16.38■□□□□ 0.21
ERCC1-201ENST00000013807 FRS2Q8WU20 508 aa16.38■□□□□ 0.21
ERCC1-201ENST00000013807 PPP1R9BQ96SB3 815 aa16.38■□□□□ 0.21
ERCC1-201ENST00000013807 EBF2Q9HAK2 575 aa16.38■□□□□ 0.21
ERCC1-201ENST00000013807 SIX2Q9NPC8 291 aa16.38■□□□□ 0.21
ERCC1-201ENST00000013807 TMEM51Q9NW97 253 aa16.38■□□□□ 0.21
ERCC1-201ENST00000013807 LATO43561 262 aa16.37■□□□□ 0.21
ERCC1-201ENST00000013807 GOT1P17174 413 aa16.37■□□□□ 0.21
ERCC1-201ENST00000013807 ABCB4P21439 1286 aa16.37■□□□□ 0.21
ERCC1-201ENST00000013807 CLCN1P35523 988 aa16.37■□□□□ 0.21
ERCC1-201ENST00000013807 NNMTP40261 264 aa16.37■□□□□ 0.21
ERCC1-201ENST00000013807 GRK6P43250 576 aa16.37■□□□□ 0.21
ERCC1-201ENST00000013807 ARHGAP44Q17R89 818 aa16.37■□□□□ 0.21
ERCC1-201ENST00000013807 RABGAP1LQ5R372 815 aa16.37■□□□□ 0.21
ERCC1-201ENST00000013807 CXorf57Q6NSI4 855 aaKnown RBP16.37■□□□□ 0.21
ERCC1-201ENST00000013807 FBXL22Q6P050 247 aa16.37■□□□□ 0.21
ERCC1-201ENST00000013807 NCEH1Q6PIU2 408 aa16.37■□□□□ 0.21
ERCC1-201ENST00000013807 OLFML1Q6UWY5 402 aa16.37■□□□□ 0.21
ERCC1-201ENST00000013807 C11orf57Q6ZUT1 292 aaPredicted RBP16.37■□□□□ 0.21
ERCC1-201ENST00000013807 SND1Q7KZF4 910 aaKnown RBP eCLIP16.37■□□□□ 0.21
ERCC1-201ENST00000013807 TMPRSS7Q7RTY8 843 aa16.37■□□□□ 0.21
ERCC1-201ENST00000013807 PROSER1Q86XN7 944 aa16.37■□□□□ 0.21
ERCC1-201ENST00000013807 ZDHHC17Q8IUH5 632 aa16.37■□□□□ 0.21
ERCC1-201ENST00000013807 AADATQ8N5Z0 425 aa16.37■□□□□ 0.21
ERCC1-201ENST00000013807 PNPLA1Q8N8W4 532 aa16.37■□□□□ 0.21
ERCC1-201ENST00000013807 NT5C3BQ969T7 300 aa16.37■□□□□ 0.21
ERCC1-201ENST00000013807 NOX5Q96PH1 765 aa16.37■□□□□ 0.21
ERCC1-201ENST00000013807 OMDQ99983 421 aa16.37■□□□□ 0.21
ERCC1-201ENST00000013807 KDM4CQ9H3R0 1056 aa16.37■□□□□ 0.21
ERCC1-201ENST00000013807 DDIT4Q9NX09 232 aa16.37■□□□□ 0.21
ERCC1-201ENST00000013807 RRN3Q9NYV6 651 aa16.37■□□□□ 0.21
ERCC1-201ENST00000013807 OR51B4Q9Y5P0 310 aa16.37■□□□□ 0.21
ERCC1-201ENST00000013807 ATRXP46100 2492 aa16.37■□□□□ 0.21
ERCC1-201ENST00000013807 A0A1B0GTQ1 180 aa16.36■□□□□ 0.21
ERCC1-201ENST00000013807 A0A1W2PP55 124 aa16.36■□□□□ 0.21
ERCC1-201ENST00000013807 H0Y8X5 98 aa16.36■□□□□ 0.21
ERCC1-201ENST00000013807 TNFSF14O43557 240 aa16.36■□□□□ 0.21
ERCC1-201ENST00000013807 ATP9BO43861 1147 aa16.36■□□□□ 0.21
ERCC1-201ENST00000013807 MZF1P28698 734 aaPredicted RBP16.36■□□□□ 0.21
ERCC1-201ENST00000013807 CDH5P33151 784 aaPredicted RBP16.36■□□□□ 0.21
ERCC1-201ENST00000013807 NOS2P35228 1153 aa16.36■□□□□ 0.21
ERCC1-201ENST00000013807 DRD3P35462 400 aa16.36■□□□□ 0.21
ERCC1-201ENST00000013807 CCT8P50990 548 aa16.36■□□□□ 0.21
ERCC1-201ENST00000013807 SLC6A3Q01959 620 aa16.36■□□□□ 0.21
ERCC1-201ENST00000013807 APBA1Q02410 837 aa16.36■□□□□ 0.21
ERCC1-201ENST00000013807 AUHQ13825 339 aaKnown RBP16.36■□□□□ 0.21
ERCC1-201ENST00000013807 RNF219Q5W0B1 726 aaPredicted RBP16.36■□□□□ 0.21
ERCC1-201ENST00000013807 FAM71AQ8IYT1 594 aa16.36■□□□□ 0.21
ERCC1-201ENST00000013807 C1orf131Q8NDD1 294 aaKnown RBP16.36■□□□□ 0.21
ERCC1-201ENST00000013807 PGAP3Q96FM1 320 aaPredicted RBP16.36■□□□□ 0.21
ERCC1-201ENST00000013807 RPL10LQ96L21 214 aaKnown RBP16.36■□□□□ 0.21
ERCC1-201ENST00000013807 SPAG5Q96R06 1193 aa16.36■□□□□ 0.21
ERCC1-201ENST00000013807 FEM1AQ9BSK4 669 aa16.36■□□□□ 0.21
ERCC1-201ENST00000013807 ACE2Q9BYF1 805 aaPredicted RBP16.36■□□□□ 0.21
ERCC1-201ENST00000013807 DKK4Q9UBT3 224 aa16.36■□□□□ 0.21
ERCC1-201ENST00000013807 BTBD3Q9Y2F9 522 aa16.36■□□□□ 0.21
ERCC1-201ENST00000013807 TBC1D30Q9Y2I9 924 aa16.36■□□□□ 0.21
ERCC1-201ENST00000013807 MYLKQ15746 1914 aa16.35■□□□□ 0.21
ERCC1-201ENST00000013807 A0A1W2PR77 199 aa16.35■□□□□ 0.21
ERCC1-201ENST00000013807 FOXN3O00409 490 aaPredicted RBP16.35■□□□□ 0.21
ERCC1-201ENST00000013807 ALOX15BO15296 676 aa16.35■□□□□ 0.21
ERCC1-201ENST00000013807 SLC7A4O43246 635 aa16.35■□□□□ 0.21
ERCC1-201ENST00000013807 RNASEH2AO75792 299 aaKnown RBP16.35■□□□□ 0.21
ERCC1-201ENST00000013807 ATXN1LP0C7T5 689 aaKnown RBP16.35■□□□□ 0.21
ERCC1-201ENST00000013807 SCNN1AP37088 669 aa16.35■□□□□ 0.21
ERCC1-201ENST00000013807 USP8P40818 1118 aa16.35■□□□□ 0.21
ERCC1-201ENST00000013807 STK19P49842 368 aaPredicted RBP16.35■□□□□ 0.21
ERCC1-201ENST00000013807 ADPRHP54922 357 aa16.35■□□□□ 0.21
ERCC1-201ENST00000013807 SCAPQ12770 1279 aa16.35■□□□□ 0.21
ERCC1-201ENST00000013807 CAMK4Q16566 473 aa16.35■□□□□ 0.21
ERCC1-201ENST00000013807 MAN2A1Q16706 1144 aa16.35■□□□□ 0.21
ERCC1-201ENST00000013807 PTPN20Q4JDL3 420 aa16.35■□□□□ 0.21
ERCC1-201ENST00000013807 FAM183BPQ6ZVS7 135 aa16.35■□□□□ 0.21
ERCC1-201ENST00000013807 STK40Q8N2I9 435 aa16.35■□□□□ 0.21
ERCC1-201ENST00000013807 SKA1Q96BD8 255 aa16.35■□□□□ 0.21
ERCC1-201ENST00000013807 NPY6RQ99463 290 aa16.35■□□□□ 0.21
ERCC1-201ENST00000013807 FAM204AQ9H8W3 233 aa16.35■□□□□ 0.21
ERCC1-201ENST00000013807 TRPM6Q9BX84 2022 aa16.35■□□□□ 0.21
ERCC1-201ENST00000013807 CELSR3Q9NYQ7 3312 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms