RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 USP3Q9Y6I4 520 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 hCG_2014768A0A024R1R8 64 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 TFAP2AP05549 437 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 ARSAP15289 507 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 AVPR1AP37288 418 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 NR2C2P49116 596 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 INHBCP55103 352 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 TMEM62Q0P6H9 643 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 OGFRL1Q5TC84 451 aaPredicted RBP14.35□□□□□ -0.11
USH1C-201ENST00000005226 NXNQ6DKJ4 435 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 C4orf22Q6V702 233 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 GADL1Q6ZQY3 521 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 PLPPR4Q7Z2D5 763 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 DEFB106AQ8N104 65 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 LILRA2Q8N149 483 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 SPATA6LQ8N4H0 392 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 METTL25Q8N6Q8 603 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 PIP4K2CQ8TBX8 421 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 RCN3Q96D15 328 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 CATSPER2Q96P56 530 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 GRIP2Q9C0E4 1043 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 DDX18Q9NVP1 670 aaKnown RBP14.35□□□□□ -0.11
USH1C-201ENST00000005226 UBP1Q9NZI7 540 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 LZTS1Q9Y250 596 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 COMMD3-BMI1R4GMX3 469 aa14.35□□□□□ -0.11
USH1C-201ENST00000005226 CRTAMO95727 393 aa14.34□□□□□ -0.11
USH1C-201ENST00000005226 C2P06681 752 aa14.34□□□□□ -0.11
USH1C-201ENST00000005226 POLBP06746 335 aa14.34□□□□□ -0.11
USH1C-201ENST00000005226 TXNP10599 105 aaKnown RBP14.34□□□□□ -0.11
USH1C-201ENST00000005226 ZFXP17010 805 aaPredicted RBP14.34□□□□□ -0.11
USH1C-201ENST00000005226 ARL4AP40617 200 aa14.34□□□□□ -0.11
USH1C-201ENST00000005226 DPP6P42658 865 aa14.34□□□□□ -0.11
USH1C-201ENST00000005226 LSM12Q3MHD2 195 aaKnown RBP14.34□□□□□ -0.11
USH1C-201ENST00000005226 CYS1Q717R9 158 aa14.34□□□□□ -0.11
USH1C-201ENST00000005226 PTAR1Q7Z6K3 402 aaPredicted RBP14.34□□□□□ -0.11
USH1C-201ENST00000005226 DSELQ8IZU8 1212 aa14.34□□□□□ -0.11
USH1C-201ENST00000005226 NLRP7Q8WX94 980 aa14.34□□□□□ -0.11
USH1C-201ENST00000005226 C11orf84Q9BUA3 381 aaPredicted RBP14.34□□□□□ -0.11
USH1C-201ENST00000005226 PPP1R1BQ9UD71 204 aaPredicted RBP14.34□□□□□ -0.11
USH1C-201ENST00000005226 GJD2Q9UKL4 321 aa14.34□□□□□ -0.11
USH1C-201ENST00000005226 KIAA1257Q9ULG3 409 aa14.34□□□□□ -0.11
USH1C-201ENST00000005226 DOCK1Q14185 1865 aa14.34□□□□□ -0.11
USH1C-201ENST00000005226 TK2O00142 265 aa14.34□□□□□ -0.11
USH1C-201ENST00000005226 VILLO15195 856 aa14.34□□□□□ -0.11
USH1C-201ENST00000005226 GAS2O43903 313 aaKnown RBP14.34□□□□□ -0.11
USH1C-201ENST00000005226 CDKL1Q00532 357 aa14.34□□□□□ -0.11
USH1C-201ENST00000005226 IFRD2Q12894 506 aaPredicted RBP14.34□□□□□ -0.11
USH1C-201ENST00000005226 NME3Q13232 169 aa14.34□□□□□ -0.11
USH1C-201ENST00000005226 CNGA3Q16281 694 aa14.34□□□□□ -0.11
USH1C-201ENST00000005226 FSCBQ5H9T9 825 aa14.34□□□□□ -0.11
USH1C-201ENST00000005226 SULF1Q8IWU6 871 aa14.34□□□□□ -0.11
USH1C-201ENST00000005226 DNAAF3Q8N9W5 541 aa14.34□□□□□ -0.11
USH1C-201ENST00000005226 ZSCAN18Q8TBC5 510 aaPredicted RBP14.34□□□□□ -0.11
USH1C-201ENST00000005226 TRPM4Q8TD43 1214 aa14.34□□□□□ -0.11
USH1C-201ENST00000005226 OPTNQ96CV9 577 aa14.34□□□□□ -0.11
USH1C-201ENST00000005226 KCNK16Q96T55 309 aa14.34□□□□□ -0.11
USH1C-201ENST00000005226 RTKNQ9BST9 563 aa14.34□□□□□ -0.11
USH1C-201ENST00000005226 SNTG2Q9NY99 539 aa14.34□□□□□ -0.11
USH1C-201ENST00000005226 CDY2AQ9Y6F7 541 aa14.34□□□□□ -0.11
USH1C-201ENST00000005226 CDY1Q9Y6F8 540 aa14.34□□□□□ -0.11
USH1C-201ENST00000005226 ZNF638Q14966 1978 aaKnown RBP14.33□□□□□ -0.12
USH1C-201ENST00000005226 CASQ2O14958 399 aaPredicted RBP14.33□□□□□ -0.12
USH1C-201ENST00000005226 PHGDHO43175 533 aaKnown RBP14.33□□□□□ -0.12
USH1C-201ENST00000005226 HBP1O60381 514 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 TRPA1O75762 1119 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 MLNP12872 115 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 NELFEP18615 380 aaKnown RBP14.33□□□□□ -0.12
USH1C-201ENST00000005226 GLDCP23378 1020 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 SULT1E1P49888 294 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 TNFAIP2Q03169 654 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 CEACAM7Q14002 265 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 NADK2Q4G0N4 442 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 DCAF6Q58WW2 860 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 RIOX2Q8IUF8 465 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 CENPIQ92674 756 aaPredicted RBP14.33□□□□□ -0.12
USH1C-201ENST00000005226 RBBP8Q99708 897 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 CHRAC1Q9NRG0 131 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 IRAK4Q9NWZ3 460 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 SLC39A10Q9ULF5 831 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 PSMD13Q9UNM6 376 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 FAM72CH0Y354 149 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 NFKBIEO00221 500 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 DESP17661 470 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 GARSP41250 739 aaKnown RBP14.33□□□□□ -0.12
USH1C-201ENST00000005226 PTPN9P43378 593 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 NDUFV1P49821 464 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 FLOT2Q14254 428 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 INSCQ1MX18 579 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 MAP3K21Q5TCX8 1036 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 FAM72AQ5TYM5 149 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 FAM72DQ6L9T8 149 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 FAM72BQ86X60 149 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 BHLHE22Q8NFJ8 381 aaPredicted RBP14.33□□□□□ -0.12
USH1C-201ENST00000005226 HIC2Q96JB3 615 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 LRGUKQ96M69 825 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 PKP2Q99959 881 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 SMARCAD1Q9H4L7 1026 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 NMRAL1Q9HBL8 299 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 IARS2Q9NSE4 1012 aaKnown RBP14.33□□□□□ -0.12
USH1C-201ENST00000005226 KLHL8Q9P2G9 620 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms