RNA–Protein interactions for RNA: ENSMUST00000161609.7

Rc3h1-202, Transcript of Roquin-1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rc3h1, Length 11,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-202ENSMUST00000161609 Arhgap36B1AUC7 590 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Msh2P43247 935 aaKnown RBP8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 FapP97321 761 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Tmem63bQ3TWI9 832 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Pcdha3Q91Y16 942 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Actl6bQ99MR0 426 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 4931423N10RikQ9D4J9 382 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 AgkQ9ESW4 421 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Galk1Q9R0N0 392 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Gm13119B1ARV5 481 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Pgbd1E9Q492 415 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Vmn2r21K7N6Y7 853 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Vmn2r20L7N2B1 853 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Hs3st1O35310 311 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Pcdhb21Q91V48 774 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Pcdha8Q91Y12 946 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Eps8l2Q99K30 729 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Armc1Q9D7A8 282 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 ParvaQ9EPC1 372 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Uchl3Q9JKB1 230 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Cyp2j12G3UXT0 502 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Pole2O54956 527 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 PfklP12382 780 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Hoxd11P23813 323 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Tgfb2P27090 414 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Adrbk2Q3UYH7 688 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Crhr2Q60748 411 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Defb34Q7TNV8 81 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Gpt2Q8BGT5 522 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Epc1Q8C9X6 813 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 GnalQ8CGK7 381 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Gfm1Q8K0D5 751 aaKnown RBP8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Nfatc4Q8K120 901 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 B3galt6Q91Z92 325 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Htra3Q9D236 459 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Ptrhd1D3Z4S3 140 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 AgtP11859 477 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Arhgef16Q3U5C8 713 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Bbs1Q3V3N7 593 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Acy3Q91XE4 318 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Exosc4Q921I9 245 aaKnown RBP8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Vmn2r90E9PXJ8 863 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Oaz2O08608 189 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Dpysl4O35098 572 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Slc28a2O88627 660 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Fdft1P53798 416 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 TiparpQ8C1B2 657 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 CgasQ8C6L5 507 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 A430089I19RikQ8C9W1 407 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Nr3c2Q8VII8 978 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Uqcrc1Q9CZ13 480 aaKnown RBP8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Rgs17Q9QZB0 210 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Col17a1Q07563 1470 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Osbpl9A2A8Z1 736 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Bclaf3A2AG58 752 aaKnown RBP8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Xlr5bA2BI50 236 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Olfr1564K7N6V7 318 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Sap18O55128 153 aaKnown RBP8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Fam193bQ3U2K0 892 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Fam35aQ3UEN2 891 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Kmt5cQ6Q783 468 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Fam149aQ8CFV2 787 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Abcb6Q9DC29 842 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 PigoQ9JJI6 1093 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Klhl41A2AUC9 606 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Gm17093F6XGJ4 214 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Lingo4Q149C3 593 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Olfr20Q7TRX9 314 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Pbdc1Q9D0B6 198 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Myo3bQ1EG27 1305 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Atg4a-psA0A0G2JFS9 396 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Gjb6P70689 261 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Lgr6Q3UVD5 967 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Vwa3aQ3UVV9 1148 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Gcnt3Q5JCT0 437 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Chi3l1Q61362 389 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Endod1Q8C522 501 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Atg4aQ8C9S8 396 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 McmbpQ8R3C0 642 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 McatQ8R3F5 381 aaKnown RBP8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Slc39a3Q99K24 317 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Cstf1Q99LC2 431 aaKnown RBP8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Pramef12Q9D2F1 463 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 4930578G10RikQ9D4Q4 153 aa8.03□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 AspgA0JNU3 564 aa8.02□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Rgs5O08850 181 aa8.02□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 EnpepP16406 945 aa8.02□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Mapkapk2P49138 386 aa8.02□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Rpl10aP53026 217 aaKnown RBP8.02□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Oaz1P54369 227 aa8.02□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Smg5Q6ZPY2 1017 aa8.02□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Tas2r134Q7TQB0 298 aa8.02□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Olfr1087Q7TR63 313 aa8.02□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Gtf2a2Q80ZM7 109 aa8.02□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Rbms1Q91W59 403 aaKnown RBP8.02□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 AslQ91YI0 464 aa8.02□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Arl10Q9QXJ4 243 aa8.02□□□□□ -1.12
Rc3h1-202ENSMUST00000161609 Slc27a6E9Q9W4 619 aa8.02□□□□□ -1.13
Rc3h1-202ENSMUST00000161609 Got1P05201 413 aa8.02□□□□□ -1.13
Rc3h1-202ENSMUST00000161609 Rfx2P48379 717 aa8.02□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms