RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Rabgef1Q9JM13 491 aa15.91■□□□□ 0.14
Vcan-201ENSMUST00000109543 Dnmt3cP0DOY1 709 aa15.9■□□□□ 0.14
Vcan-201ENSMUST00000109543 CstaP56567 97 aa15.9■□□□□ 0.14
Vcan-201ENSMUST00000109543 Kcnc2Q14B80 642 aa15.9■□□□□ 0.14
Vcan-201ENSMUST00000109543 Mxd4Q60948 209 aa15.9■□□□□ 0.14
Vcan-201ENSMUST00000109543 RbfaQ6P3B9 350 aa15.9■□□□□ 0.14
Vcan-201ENSMUST00000109543 Gprc5aQ8BHL4 356 aa15.9■□□□□ 0.14
Vcan-201ENSMUST00000109543 Cgrrf1Q8BMJ7 332 aa15.9■□□□□ 0.14
Vcan-201ENSMUST00000109543 Ttc39bQ8BYY4 617 aa15.9■□□□□ 0.14
Vcan-201ENSMUST00000109543 Spdye4bQ8CDE8 236 aa15.9■□□□□ 0.14
Vcan-201ENSMUST00000109543 Slc2a7P0C6A1 513 aa15.9■□□□□ 0.14
Vcan-201ENSMUST00000109543 Gnrh1P13562 90 aa15.9■□□□□ 0.14
Vcan-201ENSMUST00000109543 Gdf7P43029 461 aa15.9■□□□□ 0.14
Vcan-201ENSMUST00000109543 ItgavP43406 1044 aa15.9■□□□□ 0.14
Vcan-201ENSMUST00000109543 Ccna2P51943 422 aaKnown RBP15.9■□□□□ 0.14
Vcan-201ENSMUST00000109543 Lypla1P97823 230 aa15.9■□□□□ 0.14
Vcan-201ENSMUST00000109543 Cyp2c29Q64458 490 aa15.9■□□□□ 0.14
Vcan-201ENSMUST00000109543 Olfr867Q7TRF3 331 aa15.9■□□□□ 0.14
Vcan-201ENSMUST00000109543 Nim1kQ8BHI9 436 aa15.9■□□□□ 0.14
Vcan-201ENSMUST00000109543 Rmnd1Q8CI78 450 aa15.9■□□□□ 0.14
Vcan-201ENSMUST00000109543 Acvr1cQ8K348 493 aa15.9■□□□□ 0.14
Vcan-201ENSMUST00000109543 Snx15Q91WE1 337 aa15.9■□□□□ 0.14
Vcan-201ENSMUST00000109543 Fuca2Q99KR8 461 aa15.9■□□□□ 0.14
Vcan-201ENSMUST00000109543 Ndufaf1Q9CWX2 328 aa15.9■□□□□ 0.14
Vcan-201ENSMUST00000109543 Dlgap1Q9D415 992 aa15.9■□□□□ 0.14
Vcan-201ENSMUST00000109543 Olfr711Q9EPG2 314 aa15.9■□□□□ 0.14
Vcan-201ENSMUST00000109543 HemgnQ9ERZ0 503 aa15.9■□□□□ 0.14
Vcan-201ENSMUST00000109543 Dock1Q8BUR4 1865 aa15.9■□□□□ 0.14
Vcan-201ENSMUST00000109543 Trbv4A0A075B5I2 113 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 Serpine3E9Q6A2 401 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 Gm4788E9Q8B5 879 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 Taf4E9QAP7 1042 aaKnown RBP15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 C130060K24RikG3UWA8 416 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 Gm3739L7N296 216 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 PenkP22005 268 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 Ptger1P35375 405 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 G3bp2P97379 482 aaKnown RBP15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 PrkcqQ02111 707 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 Gspt2Q149F3 632 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 Ccdc85aQ5SP85 500 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 Chi3l1Q61362 389 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 Arl13bQ640N2 427 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 PigaQ64323 485 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 Tatdn1Q6P8M1 295 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 Arhgap24Q8C4V1 747 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 Nlrp4bQ8C6J9 863 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 CherpQ8CGZ0 936 aaKnown RBP15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 PvrQ8K094 408 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 TraipQ8VIG6 470 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 Cybrd1Q925G2 290 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 Acot13Q9CQR4 140 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 Syde1Q9DBZ9 737 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 Tlr6Q9EPW9 795 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 Gm3002E9PW72 216 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 DesP31001 469 aaKnown RBP15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 Samd11Q1RNF8 542 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 Meaf6Q2VPQ9 191 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 Grik1Q60934 836 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 Gm5414Q6IFZ8 552 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 Traf3ip2Q8N7N6 555 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 Caap1Q8VDY9 356 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 Smim14Q91VT8 99 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 Pcdhb13Q91Y06 796 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 Atpaf2Q91YY4 289 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 Tlr9Q9EQU3 1032 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 Oxct2bQ9ESL0 520 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 Oxct2aQ9JJN4 520 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 Fbxo17Q9QZM8 286 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 PodxlQ9R0M4 503 aa15.89■□□□□ 0.13
Vcan-201ENSMUST00000109543 1700001O22RikA2APZ1 375 aa15.88■□□□□ 0.13
Vcan-201ENSMUST00000109543 Olfr743L7N1Y2 311 aa15.88■□□□□ 0.13
Vcan-201ENSMUST00000109543 Chrna4O70174 629 aa15.88■□□□□ 0.13
Vcan-201ENSMUST00000109543 P01641 117 aa15.88■□□□□ 0.13
Vcan-201ENSMUST00000109543 Atxn1lP0C7T6 687 aa15.88■□□□□ 0.13
Vcan-201ENSMUST00000109543 Fam167bP17257 162 aa15.88■□□□□ 0.13
Vcan-201ENSMUST00000109543 Cd72P21855 354 aa15.88■□□□□ 0.13
Vcan-201ENSMUST00000109543 Calb2Q08331 271 aa15.88■□□□□ 0.13
Vcan-201ENSMUST00000109543 Arid5aQ3U108 590 aa15.88■□□□□ 0.13
Vcan-201ENSMUST00000109543 Slc22a16Q497L8 649 aa15.88■□□□□ 0.13
Vcan-201ENSMUST00000109543 Kctd8Q50H33 476 aa15.88■□□□□ 0.13
Vcan-201ENSMUST00000109543 Ksr1Q61097 873 aa15.88■□□□□ 0.13
Vcan-201ENSMUST00000109543 Skiv2lQ6NZR5 1244 aa15.88■□□□□ 0.13
Vcan-201ENSMUST00000109543 Dusp16Q6PCP3 660 aa15.88■□□□□ 0.13
Vcan-201ENSMUST00000109543 MroQ7TNB4 248 aa15.88■□□□□ 0.13
Vcan-201ENSMUST00000109543 Trpa1Q8BLA8 1125 aa15.88■□□□□ 0.13
Vcan-201ENSMUST00000109543 Trim14Q8BVW3 440 aa15.88■□□□□ 0.13
Vcan-201ENSMUST00000109543 DrgxQ8BYH0 263 aa15.88■□□□□ 0.13
Vcan-201ENSMUST00000109543 Dmtf1Q8CE22 761 aa15.88■□□□□ 0.13
Vcan-201ENSMUST00000109543 Sytl2Q99N50 950 aa15.88■□□□□ 0.13
Vcan-201ENSMUST00000109543 PompQ9CQT5 141 aa15.88■□□□□ 0.13
Vcan-201ENSMUST00000109543 Txndc12Q9CQU0 170 aa15.88■□□□□ 0.13
Vcan-201ENSMUST00000109543 Q9D9D9 101 aa15.88■□□□□ 0.13
Vcan-201ENSMUST00000109543 EtfbQ9DCW4 255 aaKnown RBP15.88■□□□□ 0.13
Vcan-201ENSMUST00000109543 Trhr2Q9ERT2 382 aa15.88■□□□□ 0.13
Vcan-201ENSMUST00000109543 Slc13a1Q9JHI4 594 aa15.88■□□□□ 0.13
Vcan-201ENSMUST00000109543 Stk11Q9WTK7 436 aa15.88■□□□□ 0.13
Vcan-201ENSMUST00000109543 Ep400Q8CHI8 3072 aaKnown RBP15.88■□□□□ 0.13
Vcan-201ENSMUST00000109543 Klhdc7bA0A286YD60 1263 aa15.88■□□□□ 0.13
Vcan-201ENSMUST00000109543 Dhx35A2ACQ1 703 aaKnown RBP15.88■□□□□ 0.13
Vcan-201ENSMUST00000109543 Grik3B1AS29 919 aa15.88■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms