RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Cdh6P97326 790 aa11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Q80WR5 230 aa11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Ccdc59Q8R2N0 240 aaKnown RBP11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Tcirg1Q9JHF5 834 aa11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Serpini2Q9JK88 405 aa11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Vnn3Q9QZ25 500 aa11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Ric1Q69ZJ7 1422 aa11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 GabreA2AMW3 916 aa11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Skint3A7TZF0 458 aa11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Htr2cP34968 459 aa11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Ptpn1P35821 432 aa11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Polr1bP70700 1135 aa11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Clec4a3Q8JZX6 237 aa11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Sbk1Q8QZX0 417 aa11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Olfr1302Q8VGE9 315 aa11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 B4galt5Q9JMK0 388 aa11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Dlg5E9Q9R9 1921 aa11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Gm5485A0A1D5RM98 91 aa11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Kif28pD3YXS5 1028 aa11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Zfp277E9Q6D6 583 aaKnown RBP11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Orm2P07361 207 aa11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Scp2P32020 547 aaKnown RBP11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 MafP54843 370 aa11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Mc4rP56450 332 aa11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Brip1Q5SXJ3 1174 aa11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Fnip2Q80TD3 1108 aa11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Vmn1r206Q8R277 312 aa11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 2310003L06RikQ9CV82 495 aa11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Trim13Q9CYB0 407 aa11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Vps35Q9EQH3 796 aaKnown RBP11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Vav3Q9R0C8 847 aa11.27□□□□□ -0.61
Scn8a-203ENSMUST00000108908 EvplQ9D952 2035 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Phlpp1Q8CHE4 1687 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 WlsQ6DID7 541 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Adam6bQ6IMH7 756 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 R3hdm2Q80TM6 1044 aaKnown RBP11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 1700001J03RikQ80ZR8 219 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Catsper4Q8BVN3 442 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 ThtpaQ8JZL3 224 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Ugt3a2Q8JZZ0 523 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Serpinb9bQ9DAV6 377 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Cyp2g1Q9WV19 494 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Rrn3B2RS91 656 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Kpna3O35344 521 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 CcnjlQ5SRT8 387 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Creld1Q91XD7 420 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Txnrd3Q99MD6 652 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Znf711A2ANX9 761 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Rpl21O09167 160 aaKnown RBP11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Glb1P23780 647 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 MylpfP97457 169 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Fdxacb1Q3UY23 622 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Rxfp1Q6R6I7 758 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Ifi44Q8BV66 422 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Gpat3Q8C0N2 438 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Clptm1Q8VBZ3 664 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Edf1Q9JMG1 148 aaKnown RBP11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Dlc1Q9R0Z9 1092 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Myh3P13541 1940 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 4930544D05RikJ3QK56 214 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 LgmnO89017 435 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Timm13P62075 95 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Rps7P62082 194 aaKnown RBP11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Spout1Q3UHX9 385 aaKnown RBP11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Bcap31Q61335 245 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 ZyxQ62523 564 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Xlr3bQ6P205 226 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Prrg3Q6PAQ9 231 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Gpr141Q7TQP0 305 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Zbtb46Q8BID6 600 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Usp1Q8BJQ2 784 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Kctd15Q8K0E1 283 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Sh3glb2Q8R3V5 400 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Dlg2Q91XM9 852 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Bap1Q99PU7 728 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Igdcc4Q9EQS9 1252 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 GraspQ9JJA9 392 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Copg2Q9QXK3 871 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Umodl1Q5DID3 1319 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Xlr5bA2BI50 236 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Gm3526E9PZM0 191 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Gm8237E9Q257 205 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 R3hdm1E9Q9Q2 1135 aaKnown RBP11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Il1rnP25085 178 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 FynP39688 537 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 AcadmP45952 421 aaKnown RBP11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Mfhas1Q3V1N1 1048 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Vsx2Q61412 361 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Fam180aQ8BR21 173 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Ildr1Q8CBR1 537 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 RybpQ8CCI5 228 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 HnrnplQ8R081 586 aaKnown RBP11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Olfr866Q8VFI7 312 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Ndufs1Q91VD9 727 aaKnown RBP11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 ScgnQ91WD9 276 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Gemin2Q9CQQ4 269 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Cdyl2Q9D5D8 503 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Spata1Q9D5R4 444 aa11.26□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Gm28168A0A087WNP1 180 aa11.25□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Vps51Q3UVL4 782 aa11.25□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms