RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Dcp2Q9CYC6 422 aa18.72■□□□□ 0.59
Trim47-202ENSMUST00000106441 Htra3Q9D236 459 aa18.72■□□□□ 0.59
Trim47-202ENSMUST00000106441 Cldn22Q9D7U6 220 aa18.72■□□□□ 0.59
Trim47-202ENSMUST00000106441 Actrt2Q9D9L5 377 aa18.72■□□□□ 0.59
Trim47-202ENSMUST00000106441 PollQ9QXE2 573 aaKnown RBP18.72■□□□□ 0.59
Trim47-202ENSMUST00000106441 QkiQ9QYS9 341 aaKnown RBP18.72■□□□□ 0.59
Trim47-202ENSMUST00000106441 Sh2d3cQ9QZS8 854 aa18.72■□□□□ 0.59
Trim47-202ENSMUST00000106441 TfgQ9Z1A1 397 aa18.72■□□□□ 0.59
Trim47-202ENSMUST00000106441 BC025446A0A087WQT1 134 aa18.72■□□□□ 0.59
Trim47-202ENSMUST00000106441 Cdc6O89033 562 aaKnown RBP18.72■□□□□ 0.59
Trim47-202ENSMUST00000106441 Abcb1bP06795 1276 aa18.72■□□□□ 0.59
Trim47-202ENSMUST00000106441 PrkcqQ02111 707 aa18.72■□□□□ 0.59
Trim47-202ENSMUST00000106441 Cdk7Q03147 346 aa18.72■□□□□ 0.59
Trim47-202ENSMUST00000106441 Entpd7Q3TCT4 606 aa18.72■□□□□ 0.59
Trim47-202ENSMUST00000106441 Xkr5Q5GH66 676 aa18.72■□□□□ 0.59
Trim47-202ENSMUST00000106441 Gdpd5Q640M6 607 aa18.72■□□□□ 0.59
Trim47-202ENSMUST00000106441 Atp2a3Q64518 1038 aa18.72■□□□□ 0.59
Trim47-202ENSMUST00000106441 Fastkd5Q7TMV3 762 aa18.72■□□□□ 0.59
Trim47-202ENSMUST00000106441 Fbxw8Q8BIA4 598 aa18.72■□□□□ 0.59
Trim47-202ENSMUST00000106441 Lin52Q8CD94 116 aa18.72■□□□□ 0.59
Trim47-202ENSMUST00000106441 Eml3Q8VC03 897 aa18.72■□□□□ 0.59
Trim47-202ENSMUST00000106441 GcshQ91WK5 170 aa18.72■□□□□ 0.59
Trim47-202ENSMUST00000106441 Pdk3Q922H2 415 aaKnown RBP18.72■□□□□ 0.59
Trim47-202ENSMUST00000106441 Tpgs1Q99MS8 303 aa18.72■□□□□ 0.59
Trim47-202ENSMUST00000106441 Mpp5Q9JLB2 675 aa18.72■□□□□ 0.59
Trim47-202ENSMUST00000106441 GghQ9Z0L8 317 aa18.72■□□□□ 0.59
Trim47-202ENSMUST00000106441 PiggD3Z3Y1 983 aa18.71■□□□□ 0.59
Trim47-202ENSMUST00000106441 Gm3187M0QWW3 260 aa18.71■□□□□ 0.59
Trim47-202ENSMUST00000106441 Neurog2P70447 263 aa18.71■□□□□ 0.59
Trim47-202ENSMUST00000106441 Bpifa6Q0VGU8 367 aa18.71■□□□□ 0.59
Trim47-202ENSMUST00000106441 Fam109bQ14B98 259 aa18.71■□□□□ 0.59
Trim47-202ENSMUST00000106441 Tlk1Q8C0V0 766 aa18.71■□□□□ 0.59
Trim47-202ENSMUST00000106441 Zfp62Q8C827 914 aa18.71■□□□□ 0.59
Trim47-202ENSMUST00000106441 Eva1bQ8K2Y3 164 aa18.71■□□□□ 0.59
Trim47-202ENSMUST00000106441 Slc22a19Q8VCA0 551 aa18.71■□□□□ 0.59
Trim47-202ENSMUST00000106441 Pcyox1Q9CQF9 505 aa18.71■□□□□ 0.59
Trim47-202ENSMUST00000106441 Txndc12Q9CQU0 170 aa18.71■□□□□ 0.59
Trim47-202ENSMUST00000106441 Mgrn1Q9D074 532 aa18.71■□□□□ 0.59
Trim47-202ENSMUST00000106441 Bace2Q9JL18 514 aa18.71■□□□□ 0.59
Trim47-202ENSMUST00000106441 Rasgrp2Q9QUG9 608 aa18.71■□□□□ 0.59
Trim47-202ENSMUST00000106441 Zfp990B1AVN5 605 aa18.71■□□□□ 0.59
Trim47-202ENSMUST00000106441 Cyp2a22B2RXZ2 492 aa18.71■□□□□ 0.59
Trim47-202ENSMUST00000106441 2010300C02RikE9Q3M9 1175 aa18.71■□□□□ 0.59
Trim47-202ENSMUST00000106441 Zfp358E9Q8M1 571 aa18.71■□□□□ 0.59
Trim47-202ENSMUST00000106441 Ptpn9O35239 593 aa18.71■□□□□ 0.59
Trim47-202ENSMUST00000106441 Prim2P33610 505 aa18.71■□□□□ 0.59
Trim47-202ENSMUST00000106441 Shmt1P50431 478 aa18.71■□□□□ 0.59
Trim47-202ENSMUST00000106441 Btg3P50615 252 aa18.71■□□□□ 0.59
Trim47-202ENSMUST00000106441 Papss1Q60967 624 aa18.71■□□□□ 0.59
Trim47-202ENSMUST00000106441 ProcrQ64695 242 aa18.71■□□□□ 0.59
Trim47-202ENSMUST00000106441 Echs1Q8BH95 290 aaKnown RBP18.71■□□□□ 0.59
Trim47-202ENSMUST00000106441 Pnma2Q8BHK0 365 aa18.71■□□□□ 0.59
Trim47-202ENSMUST00000106441 Neto2Q8BNJ6 525 aa18.71■□□□□ 0.59
Trim47-202ENSMUST00000106441 Nudt13Q8JZU0 352 aa18.71■□□□□ 0.59
Trim47-202ENSMUST00000106441 Sh3pxd2bA2AAY5 908 aa18.7■□□□□ 0.58
Trim47-202ENSMUST00000106441 Zbed6D2EAC2 980 aa18.7■□□□□ 0.58
Trim47-202ENSMUST00000106441 Mroh4G3X8W1 983 aa18.7■□□□□ 0.58
Trim47-202ENSMUST00000106441 Top6blJ3QMY9 579 aa18.7■□□□□ 0.58
Trim47-202ENSMUST00000106441 Cyp2a4P15392 494 aa18.7■□□□□ 0.58
Trim47-202ENSMUST00000106441 Cyp2a5P20852 494 aa18.7■□□□□ 0.58
Trim47-202ENSMUST00000106441 Pde6bP23440 856 aa18.7■□□□□ 0.58
Trim47-202ENSMUST00000106441 MipP51180 263 aa18.7■□□□□ 0.58
Trim47-202ENSMUST00000106441 Tmem165P52875 323 aa18.7■□□□□ 0.58
Trim47-202ENSMUST00000106441 Pcsk1P63239 753 aa18.7■□□□□ 0.58
Trim47-202ENSMUST00000106441 AcadsQ07417 412 aaKnown RBP18.7■□□□□ 0.58
Trim47-202ENSMUST00000106441 Wee2Q66JT0 555 aa18.7■□□□□ 0.58
Trim47-202ENSMUST00000106441 Mpp4Q6P7F1 635 aa18.7■□□□□ 0.58
Trim47-202ENSMUST00000106441 Cyth4Q80YW0 393 aa18.7■□□□□ 0.58
Trim47-202ENSMUST00000106441 Ccdc63Q8CDV6 558 aa18.7■□□□□ 0.58
Trim47-202ENSMUST00000106441 Etv3Q8R4Z4 513 aa18.7■□□□□ 0.58
Trim47-202ENSMUST00000106441 ChiaQ91XA9 473 aa18.7■□□□□ 0.58
Trim47-202ENSMUST00000106441 Mms19Q9D071 1031 aa18.7■□□□□ 0.58
Trim47-202ENSMUST00000106441 Polr3hQ9D2C6 204 aaKnown RBP18.7■□□□□ 0.58
Trim47-202ENSMUST00000106441 Lrrc71Q9D3W5 558 aa18.7■□□□□ 0.58
Trim47-202ENSMUST00000106441 Abcg8Q9DBM0 673 aa18.7■□□□□ 0.58
Trim47-202ENSMUST00000106441 Lima1Q9ERG0 753 aaKnown RBP18.7■□□□□ 0.58
Trim47-202ENSMUST00000106441 ClcnkbQ9WUB6 687 aa18.7■□□□□ 0.58
Trim47-202ENSMUST00000106441 Vmn2r25W4VSP2 855 aa18.7■□□□□ 0.58
Trim47-202ENSMUST00000106441 Cntnap5aQ0V8T9 1304 aa18.7■□□□□ 0.58
Trim47-202ENSMUST00000106441 Zfc3h1B2RT41 1992 aaKnown RBP18.7■□□□□ 0.58
Trim47-202ENSMUST00000106441 Serpina3iD3Z450 408 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 PtgisO35074 501 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Olfm1O88998 485 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 AladP10518 330 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Usp10P52479 792 aaKnown RBP18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Sppl2bQ3TD49 578 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Otol1Q4ZJM7 482 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Kiaa1841Q68FF0 718 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Ccdc154Q6RUT8 657 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Reps2Q80XA6 521 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Baiap2l2Q80Y61 522 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 CopaQ8CIE6 1224 aaKnown RBP18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Colgalt1Q8K297 617 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Dync1li1Q8R1Q8 523 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Slc35f5Q8R314 524 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Arhgef3Q91X46 524 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Zmat2Q9CPW7 199 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Vmn1r65Q9EPS7 332 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Tubb3Q9ERD7 450 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 RpgrQ9R0X5 1001 aa18.69■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 41.5 ms