RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Egfl7Q9QXT5 275 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Prdm12A2AJ77 365 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Ptch2O35595 1182 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 JchainP01592 159 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 LtfP08071 707 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Srp54P14576 504 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Lrrc55Q3UY51 311 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Cyp2c66Q5GLZ0 490 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Itga7Q61738 1179 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Wee2Q66JT0 555 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Siglec10Q80ZE3 688 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Luzp2Q8BGY3 345 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Tspan9Q8BJU2 239 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Catsper4Q8BVN3 442 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Mcoln2Q8K595 566 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Sorcs3Q8VI51 1219 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Tex22Q9D9U4 189 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Vnn3Q9QZ25 500 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Gm5072A2AHM1 344 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Vmn2r63E9Q0K5 859 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Gm9268E9Q0M3 861 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Vmn2r62K7N712 859 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Ccr1P51675 355 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Scn1bP97952 218 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Nab1Q61122 486 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Fam214aQ69ZK7 1075 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 AW551984Q8BGF0 804 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Plekhm3Q8BM47 761 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 EtnpplQ8BWU8 499 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Abi3Q8BYZ1 367 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Pcyox1lQ8C7K6 495 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Mab21L3Q8CI17 429 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Mmtag2Q99LX5 260 aaKnown RBP14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Lsm3P62311 102 aaKnown RBP14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Zfp78Q5U406 512 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 RragdQ7TT45 449 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Gprc5bQ923Z0 410 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Exo5Q9CXP9 373 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 2610042L04RikQ9D073 150 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Dlgap1Q9D415 992 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Hipk3Q9ERH7 1192 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Epb41l1Q9Z2H5 879 aa14.22□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Gm5814J3QP80 125 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Pdha2P35487 391 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Cdh6P97326 790 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Ptchd3Q0EEE2 906 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Mrm3Q5ND52 418 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Atp13a3Q5XF89 1219 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Stard3Q61542 446 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 VwdeQ6DFV8 926 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Awat2Q6E1M8 333 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Tbc1d10bQ8BHL3 798 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Slfnl1Q8BHW9 410 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Cdkn2aipQ8BI72 563 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Spon2Q8BMS2 330 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Cdc73Q8JZM7 531 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Klhl36Q8R124 613 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Rsl24d1Q99L28 163 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Mrpl28Q9D1B9 257 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Htra2Q9JIY5 458 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Gm3095E9Q058 166 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Reep1Q8BGH4 201 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Nat14Q8BVG8 206 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Pgm5Q8BZF8 567 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Asb2Q8K0L0 634 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Tma16Q9CR02 221 aaKnown RBP14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Abcb9Q9JJ59 762 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Dnaja4Q9JMC3 397 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Olfr220E9Q050 325 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Bub1O08901 1058 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Pold2O35654 469 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Nek2O35942 443 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 AvilO88398 819 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 ZufspQ3T9Z9 577 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Brip1Q5SXJ3 1174 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Mbtd1Q6P5G3 631 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Gpr180Q8BPS4 441 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 MutyhQ99P21 515 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Aqp5Q9WTY4 265 aa14.21□□□□□ -0.13
Col3a1-201ENSMUST00000087883 Ripor3A1L3T7 938 aa14.21□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Cyp2d9P11714 504 aa14.21□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Oas1aP11928 367 aa14.21□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Alox12P39655 663 aa14.21□□□□□ -0.14
Col3a1-201ENSMUST00000087883 YwhazP63101 245 aaKnown RBP14.21□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Rad51Q08297 339 aa14.21□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Tas2r115Q7M719 310 aa14.21□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Mfn1Q811U4 741 aa14.21□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Kansl2Q8BQR4 486 aa14.21□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Oas1gQ8K469 367 aa14.21□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Lars2Q8VDC0 902 aa14.21□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Wdsub1Q9D0I6 474 aa14.21□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Gdap2Q9DBL2 498 aa14.21□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Kifc1Q9QWT9 674 aa14.21□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Kiaa0556Q8C753 1610 aa14.21□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Slc1a6O35544 561 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Mcpt4P21812 246 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Zfp560Q3URI6 754 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Olfr792Q7TRH9 311 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Fbxo30Q8BJL1 746 aa14.2□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Acsm2Q8K0L3 575 aa14.2□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 61.7 ms