RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Cer1O55233 272 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Per3O70361 1113 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Shoc2O88520 582 aaKnown RBP8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Pias1O88907 651 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Myl4P09541 193 aaKnown RBP8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Rag1P15919 1040 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Folr1P35846 255 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Wfs1P56695 890 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Adamts8P57110 905 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Olfm3P63056 478 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Fam8a1Q3URQ4 399 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Aldh1a2Q62148 518 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 TwistnbQ78WZ7 330 aaKnown RBP8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Abcg2Q7TMS5 657 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Ip6k2Q80V72 448 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Znf76Q8BMU0 568 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Smad3Q8BUN5 425 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Stx16Q8BVI5 326 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Lrch3Q8BVU0 778 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Afap1l1Q8BZI0 768 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Tmem120aQ8C1E7 343 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 NaprtQ8CC86 538 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Trem2Q99NH8 227 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Prl5a1Q9JII2 230 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Mpp6Q9JLB0 553 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 ApipQ9WVQ5 241 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Gm29133A0A1B0GT72 266 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Elk3P41971 409 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Tubgcp3P58854 905 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 PrkcgP63318 697 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Pecam1Q08481 727 aaKnown RBP8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Rgs9bpQ148R9 237 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Zyg11bQ3UFS0 744 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Agap2Q3UHD9 1186 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Six4Q61321 775 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Arnt2Q61324 712 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Xylt1Q811B1 953 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Ppfia2Q8BSS9 1257 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Nrip1Q8CBD1 1161 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Trim68Q8K243 485 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 St13Q99L47 371 aaKnown RBP8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Fam227bQ9D518 532 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Ccdc81Q9D5W4 654 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Nop56Q9D6Z1 580 aaKnown RBP8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Ppp1r12aQ9DBR7 1029 aaKnown RBP8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 D7h11orf16Q9JJR6 402 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 PrelpQ9JK53 378 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 XkQ9QXY7 446 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Col4a6B1AVK5 1691 aa8.92□□□□□ -0.98
Trim39-201ENSMUST00000042717 Vsig10l2A0A140LHF2 776 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Sh3pxd2bA2AAY5 908 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Gm12695A2AGB2 545 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 PigrO70570 771 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Lhx3P50481 400 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Plk2P53351 682 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Lig3P97386 1015 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Dact3Q0PHV7 610 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 IqcmQ149I8 489 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Pdss1Q33DR2 409 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Alkbh5Q3TSG4 395 aaKnown RBP8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Srbd1Q497V5 1015 aaKnown RBP8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 PrkciQ62074 595 aaKnown RBP8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Glra2Q7TNC8 452 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Fnip2Q80TD3 1108 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Dnajb13Q80Y75 316 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Zfp62Q8C827 914 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Ccdc159Q8C963 411 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Cacnb2Q8CC27 655 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Trim61Q8JZK6 461 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 LipmQ8K2A6 422 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Ces2aQ8QZR3 558 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Nol6Q8R5K4 1152 aaKnown RBP8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 AjubaQ91XC0 547 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Dlg2Q91XM9 852 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Reep3Q99KK1 254 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 March2Q99M02 246 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Rmi1Q9D4G9 616 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 NbnQ9R207 751 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Slfn2Q9Z0I6 378 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Lrriq4A6H6A4 596 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Abhd12bG3UZN6 359 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Pold2O35654 469 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Aff1O88573 1216 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Ctbp1O88712 441 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Nos2P29477 1144 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 PorP37040 678 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Ccna2P51943 422 aaKnown RBP8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 MagohP61327 146 aaKnown RBP8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Lsmem1Q3UQS2 128 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Zrsr2Q62377 462 aaKnown RBP8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Rbm12b1Q80YR9 836 aaKnown RBP8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Cdkn3Q810P3 211 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 AarsQ8BGQ7 968 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Tusc3Q8BTV1 347 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Fam204aQ8C6C7 236 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 MagohbQ9CQL1 146 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Anks3Q9CZK6 655 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Cdkn2aipnlQ9D211 116 aaKnown RBP8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Pramef12Q9D2F1 463 aa8.91□□□□□ -0.98
Trim39-201ENSMUST00000042717 Slc22a17Q9D9E0 401 aa8.91□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 67.2 ms