RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Snx9Q91VH2 595 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Trim7Q923T7 510 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Nme5Q99MH5 211 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Serbp1Q9CY58 407 aaKnown RBP12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Nphs1Q9QZS7 1256 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Plxnb3Q9QY40 1902 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Znf536Q8K083 1302 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Gm5485A0A1D5RM98 91 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 UprtB1AVZ0 310 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Vmn2r72D3Z4N8 856 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Gm21293E9Q4G9 266 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Cldn5O54942 218 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Klc2O88448 599 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Mup5P11591 180 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Yipf3Q3UDR8 347 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Srbd1Q497V5 1015 aaKnown RBP12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Smarcd1Q61466 515 aaKnown RBP12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Exoc3l4Q6DIA2 721 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Olfr293Q7TS10 336 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 LnpepQ8C129 1025 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Stard13Q923Q2 1113 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Stk33Q924X7 491 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Spag6Q9JLI7 507 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Plod1Q9R0E2 728 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Gm36028A0A0U1RPM1 299 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Gm15155B1B034 138 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Fam47eD3YWC7 402 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Gm10717D3Z1I8 228 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Mkrn2osD3Z393 217 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 C130060K24RikG3UWA8 416 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Krt10P02535 570 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 LdlrP35951 862 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Kansl1lQ5DTI6 991 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Slain1Q68FF7 579 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Capn11Q6J756 714 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Nemp1Q6ZQE4 437 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Slco6c1Q8C0X7 706 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 NemfQ8CCP0 1064 aaKnown RBP12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Sntg2Q925E0 539 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 LiasQ99M04 373 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Txndc12Q9CQU0 170 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Doc2gQ9ESN1 387 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Cacng3Q9JJV5 315 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Il20Q9JKV9 176 aa12.99□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Sbf1Q6ZPE2 1867 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Zmynd8A2A484 1235 aaKnown RBP12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Vmn2r88L7N1W8 857 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 CflarO35732 481 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Fbp2P70695 339 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 UtyP79457 1212 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Samd11Q1RNF8 542 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Cd163Q2VLH6 1121 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Ccdc160Q3UYG1 323 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 AcrbpQ3V140 540 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Chi3l1Q61362 389 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Mef2dQ63943 514 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Gm5414Q6IFZ8 552 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Znf821Q6PD05 413 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Polr2eQ80UW8 210 aaKnown RBP12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Rnf168Q80XJ2 565 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Kctd13Q8BGV7 329 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Spdye4bQ8CDE8 236 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 CherpQ8CGZ0 936 aaKnown RBP12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Slco4a1Q8K078 723 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Olfr449Q8VGW8 311 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Sdcbp2Q99JZ0 292 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Armc9Q9D2I5 817 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Fam90a1bQ9D4F3 419 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Celf2Q9Z0H4 508 aaKnown RBP12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Bclaf3A2AG58 752 aaKnown RBP12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Zfp963D3Z2T8 383 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 ChrngP04760 519 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Matn1P51942 500 aaKnown RBP12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 GaaP70699 953 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 MylpfP97457 169 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Smpd1Q04519 627 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Znf865Q3U3I9 1058 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Slc22a16Q497L8 649 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Ksr1Q61097 873 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Ddx4Q61496 702 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Itih3Q61704 889 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 DgkqQ6P5E8 934 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 HpdlQ8K248 371 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Ier5lQ99J55 406 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Cldn22Q9D7U6 220 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Tmbim4Q9DA39 238 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Trim54Q9ERP3 366 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Pdpk1Q9Z2A0 559 aa12.98□□□□□ -0.33
Rnf4-201ENSMUST00000030992 PtprfA2A8L5 1898 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Rtl9Q32KG4 1339 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Tada2bD3Z4Z0 420 aaKnown RBP12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 PtproE9Q612 1226 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Vps51Q3UVL4 782 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 1810049J17RikQ3V2G9 153 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Abcd2Q61285 741 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 DazlQ64368 298 aaKnown RBP12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Mpp4Q6P7F1 635 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 MroQ7TNB4 248 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Kirrel3Q8BR86 778 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 4921504E06RikQ8CET2 560 aa12.97□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 34.9 ms