RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 NUTM2GQ5VZR2 741 aa24.43■■□□□ 1.5
PHGDH-227ENST00000641811 MARF1Q9Y4F3 1742 aaKnown RBP24.42■■□□□ 1.5
PHGDH-227ENST00000641811 ATAD2Q6PL18 1390 aa24.42■■□□□ 1.5
PHGDH-227ENST00000641811 ABCA3Q99758 1704 aa24.41■■□□□ 1.5
PHGDH-227ENST00000641811 FNBP4Q8N3X1 1017 aaPredicted RBP24.41■■□□□ 1.5
PHGDH-227ENST00000641811 USP21Q9UK80 565 aa24.41■■□□□ 1.5
PHGDH-227ENST00000641811 SOCS7O14512 581 aa24.4■■□□□ 1.5
PHGDH-227ENST00000641811 QTRT2Q9H974 415 aaKnown RBP24.4■■□□□ 1.5
PHGDH-227ENST00000641811 USP6P35125 1406 aa24.38■■□□□ 1.49
PHGDH-227ENST00000641811 ABTB2Q8N961 1025 aa24.37■■□□□ 1.49
PHGDH-227ENST00000641811 RXRBP28702 533 aa24.36■■□□□ 1.49
PHGDH-227ENST00000641811 TMC1Q8TDI8 760 aa24.36■■□□□ 1.49
PHGDH-227ENST00000641811 BCL9LQ86UU0 1499 aa24.36■■□□□ 1.49
PHGDH-227ENST00000641811 CRYBG1Q9Y4K1 1723 aa24.35■■□□□ 1.49
PHGDH-227ENST00000641811 FAM83GA6ND36 823 aa24.34■■□□□ 1.49
PHGDH-227ENST00000641811 SLC12A5Q9H2X9 1139 aa24.34■■□□□ 1.49
PHGDH-227ENST00000641811 ZNF692Q9BU19 519 aaPredicted RBP24.33■■□□□ 1.49
PHGDH-227ENST00000641811 CPSF1Q10570 1443 aaKnown RBP24.33■■□□□ 1.49
PHGDH-227ENST00000641811 SSH2Q76I76 1423 aa24.33■■□□□ 1.49
PHGDH-227ENST00000641811 BRD4O60885 1362 aaPredicted RBP24.32■■□□□ 1.48
PHGDH-227ENST00000641811 SLIT2O94813 1529 aa24.32■■□□□ 1.48
PHGDH-227ENST00000641811 PUS7Q96PZ0 661 aaKnown RBP24.31■■□□□ 1.48
PHGDH-227ENST00000641811 TRPC5Q9UL62 973 aaPredicted RBP24.31■■□□□ 1.48
PHGDH-227ENST00000641811 AKAP12Q02952 1782 aa24.31■■□□□ 1.48
PHGDH-227ENST00000641811 KTN1Q86UP2 1357 aaKnown RBP24.3■■□□□ 1.48
PHGDH-227ENST00000641811 ATRNO75882 1429 aa24.3■■□□□ 1.48
PHGDH-227ENST00000641811 RBM6P78332 1123 aaKnown RBP24.3■■□□□ 1.48
PHGDH-227ENST00000641811 CD163L1Q9NR16 1453 aa24.3■■□□□ 1.48
PHGDH-227ENST00000641811 TTC21BQ7Z4L5 1316 aa24.3■■□□□ 1.48
PHGDH-227ENST00000641811 PHRF1Q9P1Y6 1649 aaKnown RBP24.29■■□□□ 1.48
PHGDH-227ENST00000641811 SLC24A1O60721 1099 aa24.29■■□□□ 1.48
PHGDH-227ENST00000641811 TMF1P82094 1093 aa24.29■■□□□ 1.48
PHGDH-227ENST00000641811 NLRP13Q86W25 1043 aa24.29■■□□□ 1.48
PHGDH-227ENST00000641811 UNC5CLQ8IV45 518 aa24.29■■□□□ 1.48
PHGDH-227ENST00000641811 PLCH1Q4KWH8 1693 aa24.28■■□□□ 1.48
PHGDH-227ENST00000641811 NLRP6P59044 892 aa24.28■■□□□ 1.48
PHGDH-227ENST00000641811 ZC3H6P61129 1189 aaKnown RBP24.28■■□□□ 1.48
PHGDH-227ENST00000641811 USP19O94966 1318 aa24.28■■□□□ 1.48
PHGDH-227ENST00000641811 PRDM11Q9NQV5 511 aa24.27■■□□□ 1.48
PHGDH-227ENST00000641811 KIAA0232Q92628 1395 aa24.27■■□□□ 1.48
PHGDH-227ENST00000641811 PIK3C2AO00443 1686 aa24.25■■□□□ 1.47
PHGDH-227ENST00000641811 CHRNA2Q15822 529 aa24.25■■□□□ 1.47
PHGDH-227ENST00000641811 HDGFL2Q7Z4V5 671 aaPredicted RBP24.25■■□□□ 1.47
PHGDH-227ENST00000641811 BTG4Q9NY30 223 aa24.25■■□□□ 1.47
PHGDH-227ENST00000641811 NRKQ7Z2Y5 1582 aa24.25■■□□□ 1.47
PHGDH-227ENST00000641811 MON2Q7Z3U7 1717 aa24.24■■□□□ 1.47
PHGDH-227ENST00000641811 GCP02774 474 aa24.24■■□□□ 1.47
PHGDH-227ENST00000641811 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.24■■□□□ 1.47
PHGDH-227ENST00000641811 TERF2IPQ9NYB0 399 aa24.24■■□□□ 1.47
PHGDH-227ENST00000641811 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.24■■□□□ 1.47
PHGDH-227ENST00000641811 COL14A1Q05707 1796 aaKnown RBP24.24■■□□□ 1.47
PHGDH-227ENST00000641811 HSPA5P11021 654 aaKnown RBP24.23■■□□□ 1.47
PHGDH-227ENST00000641811 GJD4Q96KN9 370 aaPredicted RBP24.23■■□□□ 1.47
PHGDH-227ENST00000641811 TTC21AQ8NDW8 1320 aa24.23■■□□□ 1.47
PHGDH-227ENST00000641811 A0A1W2PP64 1363 aa24.23■■□□□ 1.47
PHGDH-227ENST00000641811 RGS12O14924 1447 aa24.23■■□□□ 1.47
PHGDH-227ENST00000641811 CDK12Q9NYV4 1490 aaPredicted RBP24.23■■□□□ 1.47
PHGDH-227ENST00000641811 NWD2Q9ULI1 1742 aa24.22■■□□□ 1.47
PHGDH-227ENST00000641811 EIF4G2P78344 907 aaKnown RBP eCLIP24.22■■□□□ 1.477e-14■■■■■ 63.8
PHGDH-227ENST00000641811 ZRANB1Q9UGI0 708 aa24.22■■□□□ 1.47
PHGDH-227ENST00000641811 VPS72Q15906 364 aa24.2■■□□□ 1.46
PHGDH-227ENST00000641811 NINLQ9Y2I6 1382 aa24.19■■□□□ 1.46
PHGDH-227ENST00000641811 NME9Q86XW9 330 aa24.19■■□□□ 1.46
PHGDH-227ENST00000641811 CCDC9Q9Y3X0 531 aaKnown RBP24.19■■□□□ 1.46
PHGDH-227ENST00000641811 GLI3P10071 1580 aa24.18■■□□□ 1.46
PHGDH-227ENST00000641811 CDCA8Q53HL2 280 aa24.18■■□□□ 1.46
PHGDH-227ENST00000641811 SLIT3O75094 1523 aa24.18■■□□□ 1.46
PHGDH-227ENST00000641811 NRAPQ86VF7 1730 aa24.18■■□□□ 1.46
PHGDH-227ENST00000641811 EDC4Q6P2E9 1401 aaKnown RBP24.18■■□□□ 1.46
PHGDH-227ENST00000641811 CPDO75976 1380 aa24.17■■□□□ 1.46
PHGDH-227ENST00000641811 ZBTB7CA1YPR0 619 aa24.17■■□□□ 1.46
PHGDH-227ENST00000641811 SOX12O15370 315 aa24.17■■□□□ 1.46
PHGDH-227ENST00000641811 STRN4Q9NRL3 753 aa24.14■■□□□ 1.45
PHGDH-227ENST00000641811 ANKRD36BQ8N2N9 1353 aa24.14■■□□□ 1.45
PHGDH-227ENST00000641811 POLR3GLQ9BT43 218 aa24.13■■□□□ 1.45
PHGDH-227ENST00000641811 USP31Q70CQ4 1352 aa24.13■■□□□ 1.45
PHGDH-227ENST00000641811 CAMTA1Q9Y6Y1 1673 aa24.12■■□□□ 1.45
PHGDH-227ENST00000641811 KCNH5Q8NCM2 988 aa24.11■■□□□ 1.45
PHGDH-227ENST00000641811 LMO7Q8WWI1 1683 aa24.11■■□□□ 1.45
PHGDH-227ENST00000641811 MYOM1P52179 1685 aa24.09■■□□□ 1.45
PHGDH-227ENST00000641811 EVA1CP58658 441 aa24.09■■□□□ 1.45
PHGDH-227ENST00000641811 SPATA31A5Q5VU36 1347 aa24.09■■□□□ 1.45
PHGDH-227ENST00000641811 SPATA31A7Q8IWB4 1347 aa24.09■■□□□ 1.45
PHGDH-227ENST00000641811 ARHGEF25Q86VW2 580 aa24.08■■□□□ 1.45
PHGDH-227ENST00000641811 NFAT5O94916 1531 aa24.08■■□□□ 1.45
PHGDH-227ENST00000641811 AATKQ6ZMQ8 1374 aa24.07■■□□□ 1.44
PHGDH-227ENST00000641811 C11orf95C9JLR9 678 aaPredicted RBP24.07■■□□□ 1.44
PHGDH-227ENST00000641811 FAM98CQ17RN3 349 aaKnown RBP24.07■■□□□ 1.44
PHGDH-227ENST00000641811 SEPT12Q8IYM1 358 aa24.07■■□□□ 1.44
PHGDH-227ENST00000641811 USP54Q70EL1 1684 aa24.06■■□□□ 1.44
PHGDH-227ENST00000641811 LARP1Q6PKG0 1096 aaKnown RBP24.06■■□□□ 1.44
PHGDH-227ENST00000641811 CARD14Q9BXL6 1004 aa24.06■■□□□ 1.44
PHGDH-227ENST00000641811 AXIN2Q9Y2T1 843 aa24.06■■□□□ 1.44
PHGDH-227ENST00000641811 OVOS2A0A0J9YW53 1432 aa24.05■■□□□ 1.44
PHGDH-227ENST00000641811 OVOS2Q6IE36 1432 aa24.05■■□□□ 1.44
PHGDH-227ENST00000641811 ONECUT3O60422 494 aaPredicted RBP24.05■■□□□ 1.44
PHGDH-227ENST00000641811 COL18A1P39060 1754 aa24.04■■□□□ 1.44
PHGDH-227ENST00000641811 USP35Q9P2H5 1018 aa24.04■■□□□ 1.44
PHGDH-227ENST00000641811 SPATA31A1Q5TZJ5 1347 aa24.04■■□□□ 1.44
PHGDH-227ENST00000641811 COL5A2P05997 1499 aaPredicted RBP24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms