RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 ACIN1Q9UKV3 1341 aaKnown RBP14.77□□□□□ -0.04
PHGDH-222ENST00000641587 BAG6P46379 1132 aa14.76□□□□□ -0.05
PHGDH-222ENST00000641587 THSD7AQ9UPZ6 1657 aa14.76□□□□□ -0.05
PHGDH-222ENST00000641587 RGPD1P0DJD0 1748 aa14.75□□□□□ -0.05
PHGDH-222ENST00000641587 TNS1Q9HBL0 1735 aaKnown RBP14.75□□□□□ -0.05
PHGDH-222ENST00000641587 GPRASP1Q5JY77 1395 aa14.75□□□□□ -0.05
PHGDH-222ENST00000641587 RAB3GAP2Q9H2M9 1393 aa14.75□□□□□ -0.05
PHGDH-222ENST00000641587 EN1Q05925 392 aaPredicted RBP14.75□□□□□ -0.05
PHGDH-222ENST00000641587 KDM2AQ9Y2K7 1162 aa14.74□□□□□ -0.05
PHGDH-222ENST00000641587 ARHGEF28Q8N1W1 1705 aaKnown RBP14.74□□□□□ -0.05
PHGDH-222ENST00000641587 SPATA31A5Q5VU36 1347 aa14.73□□□□□ -0.05
PHGDH-222ENST00000641587 SPATA31A7Q8IWB4 1347 aa14.73□□□□□ -0.05
PHGDH-222ENST00000641587 WASLO00401 505 aaPredicted RBP14.73□□□□□ -0.05
PHGDH-222ENST00000641587 PAK3O75914 559 aaPredicted RBP14.73□□□□□ -0.05
PHGDH-222ENST00000641587 HRCP23327 699 aa14.73□□□□□ -0.05
PHGDH-222ENST00000641587 PHRF1Q9P1Y6 1649 aaKnown RBP14.73□□□□□ -0.05
PHGDH-222ENST00000641587 ATP7BP35670 1465 aa14.72□□□□□ -0.05
PHGDH-222ENST00000641587 NGDNQ8NEJ9 315 aaKnown RBP14.72□□□□□ -0.05
PHGDH-222ENST00000641587 CHRNA2Q15822 529 aa14.71□□□□□ -0.05
PHGDH-222ENST00000641587 DCAF11Q8TEB1 546 aa14.71□□□□□ -0.05
PHGDH-222ENST00000641587 PCGF6Q9BYE7 350 aa14.71□□□□□ -0.05
PHGDH-222ENST00000641587 PRDM11Q9NQV5 511 aa14.71□□□□□ -0.05
PHGDH-222ENST00000641587 ITSN1Q15811 1721 aa14.71□□□□□ -0.05
PHGDH-222ENST00000641587 EIF3AQ14152 1382 aaKnown RBP14.71□□□□□ -0.06
PHGDH-222ENST00000641587 KIAA0232Q92628 1395 aa14.71□□□□□ -0.06
PHGDH-222ENST00000641587 R3HDM1Q15032 1099 aaKnown RBP14.7□□□□□ -0.06
PHGDH-222ENST00000641587 EZH2Q15910 746 aaKnown RBP14.69□□□□□ -0.06
PHGDH-222ENST00000641587 NUTM2GQ5VZR2 741 aa14.69□□□□□ -0.06
PHGDH-222ENST00000641587 DISP2A7MBM2 1401 aa14.68□□□□□ -0.06
PHGDH-222ENST00000641587 STRN4Q9NRL3 753 aa14.68□□□□□ -0.06
PHGDH-222ENST00000641587 SPATA31A1Q5TZJ5 1347 aa14.67□□□□□ -0.06
PHGDH-222ENST00000641587 ZC3H6P61129 1189 aaKnown RBP14.67□□□□□ -0.06
PHGDH-222ENST00000641587 TOPAZ1Q8N9V7 1692 aa14.67□□□□□ -0.06
PHGDH-222ENST00000641587 NRKQ7Z2Y5 1582 aa14.66□□□□□ -0.06
PHGDH-222ENST00000641587 TRIM37O94972 964 aa14.66□□□□□ -0.06
PHGDH-222ENST00000641587 NUDT16Q96DE0 195 aaKnown RBP14.66□□□□□ -0.06
PHGDH-222ENST00000641587 USP35Q9P2H5 1018 aa14.66□□□□□ -0.06
PHGDH-222ENST00000641587 RREB1Q92766 1687 aa14.63□□□□□ -0.07
PHGDH-222ENST00000641587 CAMTA1Q9Y6Y1 1673 aa14.63□□□□□ -0.07
PHGDH-222ENST00000641587 CAMKK2Q96RR4 588 aa14.63□□□□□ -0.07
PHGDH-222ENST00000641587 CDK19Q9BWU1 502 aa14.63□□□□□ -0.07
PHGDH-222ENST00000641587 SSH2Q76I76 1423 aa14.63□□□□□ -0.07
PHGDH-222ENST00000641587 NUP188Q5SRE5 1749 aa14.63□□□□□ -0.07
PHGDH-222ENST00000641587 LMO7Q8WWI1 1683 aa14.62□□□□□ -0.07
PHGDH-222ENST00000641587 ACEP12821 1306 aa14.62□□□□□ -0.07
PHGDH-222ENST00000641587 POLR3AO14802 1390 aaPredicted RBP14.61□□□□□ -0.07
PHGDH-222ENST00000641587 APBA3O96018 575 aa14.61□□□□□ -0.07
PHGDH-222ENST00000641587 LARP1Q6PKG0 1096 aaKnown RBP14.61□□□□□ -0.07
PHGDH-222ENST00000641587 FAM196AQ6ZSG2 479 aa14.61□□□□□ -0.07
PHGDH-222ENST00000641587 NBPF8Q3BBV2 869 aa14.59□□□□□ -0.07
PHGDH-222ENST00000641587 EVA1CP58658 441 aa14.58□□□□□ -0.08
PHGDH-222ENST00000641587 ABTB2Q8N961 1025 aa14.58□□□□□ -0.08
PHGDH-222ENST00000641587 PDE3BQ13370 1112 aa14.57□□□□□ -0.08
PHGDH-222ENST00000641587 BARGINQ6ZT62 677 aa14.57□□□□□ -0.08
PHGDH-222ENST00000641587 CCDC61Q9Y6R9 512 aa14.57□□□□□ -0.08
PHGDH-222ENST00000641587 USP19O94966 1318 aa14.57□□□□□ -0.08
PHGDH-222ENST00000641587 KIAA1210Q9ULL0 1709 aa14.57□□□□□ -0.08
PHGDH-222ENST00000641587 PLEKHG3A1L390 1219 aa14.56□□□□□ -0.08
PHGDH-222ENST00000641587 NBPF1Q3BBV0 1214 aa14.56□□□□□ -0.08
PHGDH-222ENST00000641587 STAC3Q96MF2 364 aa14.56□□□□□ -0.08
PHGDH-222ENST00000641587 CPDO75976 1380 aa14.56□□□□□ -0.08
PHGDH-222ENST00000641587 PARD3Q8TEW0 1356 aa14.56□□□□□ -0.08
PHGDH-222ENST00000641587 COL5A2P05997 1499 aaPredicted RBP14.56□□□□□ -0.08
PHGDH-222ENST00000641587 PARP4Q9UKK3 1724 aaKnown RBP14.55□□□□□ -0.08
PHGDH-222ENST00000641587 TCP11L2Q8N4U5 519 aa14.55□□□□□ -0.08
PHGDH-222ENST00000641587 PPIP5K1Q6PFW1 1433 aa14.55□□□□□ -0.08
PHGDH-222ENST00000641587 ZBTB7CA1YPR0 619 aa14.54□□□□□ -0.08
PHGDH-222ENST00000641587 PEAK1Q9H792 1746 aa14.53□□□□□ -0.08
PHGDH-222ENST00000641587 QRICH2Q9H0J4 1663 aa14.53□□□□□ -0.08
PHGDH-222ENST00000641587 LRRC37A3O60309 1634 aa14.53□□□□□ -0.08
PHGDH-222ENST00000641587 GCP02774 474 aa14.53□□□□□ -0.08
PHGDH-222ENST00000641587 SRPK2P78362 688 aaKnown RBP14.53□□□□□ -0.08
PHGDH-222ENST00000641587 CABP2Q9NPB3 220 aa14.53□□□□□ -0.08
PHGDH-222ENST00000641587 SBF2Q86WG5 1849 aa14.52□□□□□ -0.09
PHGDH-222ENST00000641587 NLRP13Q86W25 1043 aa14.51□□□□□ -0.09
PHGDH-222ENST00000641587 CRB1P82279 1406 aa14.5□□□□□ -0.09
PHGDH-222ENST00000641587 PIK3C2AO00443 1686 aa14.5□□□□□ -0.09
PHGDH-222ENST00000641587 THRAP3Q9Y2W1 955 aaKnown RBP14.5□□□□□ -0.09
PHGDH-222ENST00000641587 SLIT3O75094 1523 aa14.5□□□□□ -0.09
PHGDH-222ENST00000641587 WNK3Q9BYP7 1800 aa14.5□□□□□ -0.09
PHGDH-222ENST00000641587 USP6P35125 1406 aa14.49□□□□□ -0.09
PHGDH-222ENST00000641587 CENPJQ9HC77 1338 aaPredicted RBP14.49□□□□□ -0.09
PHGDH-222ENST00000641587 NBPF14Q5TI25 921 aa14.49□□□□□ -0.09
PHGDH-222ENST00000641587 PTF1AQ7RTS3 328 aa14.49□□□□□ -0.09
PHGDH-222ENST00000641587 COL18A1P39060 1754 aa14.49□□□□□ -0.09
PHGDH-222ENST00000641587 OVOS2A0A0G2JMS6 1433 aa14.49□□□□□ -0.09
PHGDH-222ENST00000641587 OVOS2A0A0J9YW53 1432 aa14.49□□□□□ -0.09
PHGDH-222ENST00000641587 OVOS2Q6IE36 1432 aa14.49□□□□□ -0.09
PHGDH-222ENST00000641587 ANO8Q9HCE9 1232 aaPredicted RBP14.48□□□□□ -0.09
PHGDH-222ENST00000641587 NLRP6P59044 892 aa14.47□□□□□ -0.09
PHGDH-222ENST00000641587 CABP1Q9NZU7 370 aa14.47□□□□□ -0.09
PHGDH-222ENST00000641587 RGPD3A6NKT7 1758 aaPredicted RBP14.47□□□□□ -0.09
PHGDH-222ENST00000641587 RGPD4Q7Z3J3 1758 aa14.47□□□□□ -0.09
PHGDH-222ENST00000641587 RGPD5Q99666 1765 aa14.47□□□□□ -0.09
PHGDH-222ENST00000641587 YY1P25490 414 aa14.46□□□□□ -0.09
PHGDH-222ENST00000641587 AXIN2Q9Y2T1 843 aa14.46□□□□□ -0.09
PHGDH-222ENST00000641587 CASZ1Q86V15 1759 aa14.46□□□□□ -0.09
PHGDH-222ENST00000641587 AATKQ6ZMQ8 1374 aa14.46□□□□□ -0.1
PHGDH-222ENST00000641587 KCNQ2O43526 872 aa14.45□□□□□ -0.1
PHGDH-222ENST00000641587 TOM1L2Q6ZVM7 507 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms