RNA–Protein interactions for RNA: ENST00000641339.1

RGPD1-205, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

Gene RGPD1, Length 562 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-205ENST00000641339 PLEKHG5O94827 1062 aa23.36■■□□□ 1.33
RGPD1-205ENST00000641339 QTRT2Q9H974 415 aaKnown RBP23.35■■□□□ 1.33
RGPD1-205ENST00000641339 USP21Q9UK80 565 aa23.33■■□□□ 1.33
RGPD1-205ENST00000641339 BCL9LQ86UU0 1499 aa23.32■■□□□ 1.32
RGPD1-205ENST00000641339 ATAD2Q6PL18 1390 aa23.32■■□□□ 1.32
RGPD1-205ENST00000641339 HAP1P54257 671 aaPredicted RBP23.31■■□□□ 1.32
RGPD1-205ENST00000641339 USP47Q96K76 1375 aa23.3■■□□□ 1.32
RGPD1-205ENST00000641339 FAM83GA6ND36 823 aa23.3■■□□□ 1.32
RGPD1-205ENST00000641339 PUS7Q96PZ0 661 aaKnown RBP23.3■■□□□ 1.32
RGPD1-205ENST00000641339 USP6P35125 1406 aa23.29■■□□□ 1.32
RGPD1-205ENST00000641339 NUTM2GQ5VZR2 741 aa23.29■■□□□ 1.32
RGPD1-205ENST00000641339 SSH2Q76I76 1423 aa23.29■■□□□ 1.32
RGPD1-205ENST00000641339 UPF1Q92900 1129 aaKnown RBP eCLIP23.29■■□□□ 1.32
RGPD1-205ENST00000641339 BRD4O60885 1362 aaPredicted RBP23.28■■□□□ 1.32
RGPD1-205ENST00000641339 MARF1Q9Y4F3 1742 aaKnown RBP23.28■■□□□ 1.32
RGPD1-205ENST00000641339 ABTB2Q8N961 1025 aa23.28■■□□□ 1.32
RGPD1-205ENST00000641339 ZNF692Q9BU19 519 aaPredicted RBP23.28■■□□□ 1.32
RGPD1-205ENST00000641339 SLIT2O94813 1529 aa23.28■■□□□ 1.32
RGPD1-205ENST00000641339 CPSF1Q10570 1443 aaKnown RBP23.27■■□□□ 1.32
RGPD1-205ENST00000641339 ABCA3Q99758 1704 aa23.27■■□□□ 1.32
RGPD1-205ENST00000641339 RBM6P78332 1123 aaKnown RBP23.26■■□□□ 1.31
RGPD1-205ENST00000641339 TRPC5Q9UL62 973 aaPredicted RBP23.26■■□□□ 1.31
RGPD1-205ENST00000641339 ATRNO75882 1429 aa23.25■■□□□ 1.31
RGPD1-205ENST00000641339 SLC24A1O60721 1099 aa23.25■■□□□ 1.31
RGPD1-205ENST00000641339 UNC5CLQ8IV45 518 aa23.25■■□□□ 1.31
RGPD1-205ENST00000641339 SLC12A5Q9H2X9 1139 aa23.25■■□□□ 1.31
RGPD1-205ENST00000641339 RGS12O14924 1447 aa23.25■■□□□ 1.31
RGPD1-205ENST00000641339 CDK12Q9NYV4 1490 aaPredicted RBP23.24■■□□□ 1.31
RGPD1-205ENST00000641339 CRYBG1Q9Y4K1 1723 aa23.24■■□□□ 1.31
RGPD1-205ENST00000641339 CD163L1Q9NR16 1453 aa23.24■■□□□ 1.31
RGPD1-205ENST00000641339 NLRP13Q86W25 1043 aa23.22■■□□□ 1.31
RGPD1-205ENST00000641339 USP19O94966 1318 aa23.22■■□□□ 1.31
RGPD1-205ENST00000641339 TTC21BQ7Z4L5 1316 aa23.22■■□□□ 1.31
RGPD1-205ENST00000641339 TMC1Q8TDI8 760 aa23.21■■□□□ 1.31
RGPD1-205ENST00000641339 KTN1Q86UP2 1357 aaKnown RBP23.2■■□□□ 1.3
RGPD1-205ENST00000641339 NLRP6P59044 892 aa23.19■■□□□ 1.3
RGPD1-205ENST00000641339 TMF1P82094 1093 aa23.19■■□□□ 1.3
RGPD1-205ENST00000641339 GJD4Q96KN9 370 aaPredicted RBP23.19■■□□□ 1.3
RGPD1-205ENST00000641339 KIAA0232Q92628 1395 aa23.18■■□□□ 1.3
RGPD1-205ENST00000641339 GCP02774 474 aa23.18■■□□□ 1.3
RGPD1-205ENST00000641339 ZC3H6P61129 1189 aaKnown RBP23.18■■□□□ 1.3
RGPD1-205ENST00000641339 BTG4Q9NY30 223 aa23.17■■□□□ 1.3
RGPD1-205ENST00000641339 AKAP12Q02952 1782 aa23.17■■□□□ 1.3
RGPD1-205ENST00000641339 PHRF1Q9P1Y6 1649 aaKnown RBP23.16■■□□□ 1.3
RGPD1-205ENST00000641339 TTC21AQ8NDW8 1320 aa23.16■■□□□ 1.3
RGPD1-205ENST00000641339 VPS72Q15906 364 aa23.16■■□□□ 1.3
RGPD1-205ENST00000641339 PRDM11Q9NQV5 511 aa23.16■■□□□ 1.3
RGPD1-205ENST00000641339 CHRNA2Q15822 529 aa23.15■■□□□ 1.3
RGPD1-205ENST00000641339 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.15■■□□□ 1.3
RGPD1-205ENST00000641339 PLCH1Q4KWH8 1693 aa23.14■■□□□ 1.29
RGPD1-205ENST00000641339 HDGFL2Q7Z4V5 671 aaPredicted RBP23.14■■□□□ 1.29
RGPD1-205ENST00000641339 TERF2IPQ9NYB0 399 aa23.14■■□□□ 1.29
RGPD1-205ENST00000641339 A0A1W2PP64 1363 aa23.14■■□□□ 1.29
RGPD1-205ENST00000641339 CPDO75976 1380 aa23.14■■□□□ 1.29
RGPD1-205ENST00000641339 PIK3C2AO00443 1686 aa23.13■■□□□ 1.29
RGPD1-205ENST00000641339 COL14A1Q05707 1796 aaKnown RBP23.13■■□□□ 1.29
RGPD1-205ENST00000641339 NRKQ7Z2Y5 1582 aa23.13■■□□□ 1.29
RGPD1-205ENST00000641339 NWD2Q9ULI1 1742 aa23.13■■□□□ 1.29
RGPD1-205ENST00000641339 NINLQ9Y2I6 1382 aa23.13■■□□□ 1.29
RGPD1-205ENST00000641339 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.12■■□□□ 1.29
RGPD1-205ENST00000641339 ZRANB1Q9UGI0 708 aa23.12■■□□□ 1.29
RGPD1-205ENST00000641339 HSPA5P11021 654 aaKnown RBP23.11■■□□□ 1.29
RGPD1-205ENST00000641339 EIF4G2P78344 907 aaKnown RBP eCLIP23.11■■□□□ 1.29
RGPD1-205ENST00000641339 SLIT3O75094 1523 aa23.11■■□□□ 1.29
RGPD1-205ENST00000641339 MON2Q7Z3U7 1717 aa23.1■■□□□ 1.29
RGPD1-205ENST00000641339 GLI3P10071 1580 aa23.1■■□□□ 1.29
RGPD1-205ENST00000641339 EDC4Q6P2E9 1401 aaKnown RBP23.09■■□□□ 1.29
RGPD1-205ENST00000641339 CDCA8Q53HL2 280 aa23.09■■□□□ 1.29
RGPD1-205ENST00000641339 NME9Q86XW9 330 aa23.09■■□□□ 1.29
RGPD1-205ENST00000641339 USP31Q70CQ4 1352 aa23.09■■□□□ 1.29
RGPD1-205ENST00000641339 NRAPQ86VF7 1730 aa23.08■■□□□ 1.29
RGPD1-205ENST00000641339 ONECUT3O60422 494 aaPredicted RBP23.08■■□□□ 1.29
RGPD1-205ENST00000641339 ANKRD36BQ8N2N9 1353 aa23.06■■□□□ 1.28
RGPD1-205ENST00000641339 CCDC9Q9Y3X0 531 aaKnown RBP23.06■■□□□ 1.28
RGPD1-205ENST00000641339 CAMTA1Q9Y6Y1 1673 aa23.06■■□□□ 1.28
RGPD1-205ENST00000641339 ARHGEF25Q86VW2 580 aa23.05■■□□□ 1.28
RGPD1-205ENST00000641339 KCNH5Q8NCM2 988 aa23.05■■□□□ 1.28
RGPD1-205ENST00000641339 SPATA31A5Q5VU36 1347 aa23.05■■□□□ 1.28
RGPD1-205ENST00000641339 SPATA31A7Q8IWB4 1347 aa23.05■■□□□ 1.28
RGPD1-205ENST00000641339 STRN4Q9NRL3 753 aa23.03■■□□□ 1.28
RGPD1-205ENST00000641339 LMO7Q8WWI1 1683 aa23.03■■□□□ 1.28
RGPD1-205ENST00000641339 AATKQ6ZMQ8 1374 aa23.02■■□□□ 1.28
RGPD1-205ENST00000641339 SOX12O15370 315 aa23.02■■□□□ 1.28
RGPD1-205ENST00000641339 AXIN2Q9Y2T1 843 aa23.02■■□□□ 1.28
RGPD1-205ENST00000641339 EP400Q96L91 3159 aa23.02■■□□□ 1.28
RGPD1-205ENST00000641339 SEPT12Q8IYM1 358 aa23.01■■□□□ 1.27
RGPD1-205ENST00000641339 SPATA31A1Q5TZJ5 1347 aa23.01■■□□□ 1.27
RGPD1-205ENST00000641339 NFAT5O94916 1531 aa23■■□□□ 1.27
RGPD1-205ENST00000641339 EVA1CP58658 441 aa23■■□□□ 1.27
RGPD1-205ENST00000641339 FAM98CQ17RN3 349 aaKnown RBP23■■□□□ 1.27
RGPD1-205ENST00000641339 LARP1Q6PKG0 1096 aaKnown RBP23■■□□□ 1.27
RGPD1-205ENST00000641339 CARD14Q9BXL6 1004 aa23■■□□□ 1.27
RGPD1-205ENST00000641339 ZBTB7CA1YPR0 619 aa22.99■■□□□ 1.27
RGPD1-205ENST00000641339 C11orf95C9JLR9 678 aaPredicted RBP22.99■■□□□ 1.27
RGPD1-205ENST00000641339 OVOS2A0A0J9YW53 1432 aa22.99■■□□□ 1.27
RGPD1-205ENST00000641339 OVOS2Q6IE36 1432 aa22.99■■□□□ 1.27
RGPD1-205ENST00000641339 USP54Q70EL1 1684 aa22.98■■□□□ 1.27
RGPD1-205ENST00000641339 BRWD3Q6RI45 1802 aa22.98■■□□□ 1.27
RGPD1-205ENST00000641339 FYB1O15117 783 aa22.97■■□□□ 1.27
RGPD1-205ENST00000641339 COL5A2P05997 1499 aaPredicted RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms