RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 STAC3Q96MF2 364 aa24.32■■□□□ 1.48
PHGDH-213ENST00000641272 A0A0G2JS52 829 aa24.31■■□□□ 1.48
PHGDH-213ENST00000641272 MYT1Q01538 1121 aa24.31■■□□□ 1.48
PHGDH-213ENST00000641272 BLMP54132 1417 aaPredicted RBP24.29■■□□□ 1.48
PHGDH-213ENST00000641272 NUDT16Q96DE0 195 aaKnown RBP24.29■■□□□ 1.48
PHGDH-213ENST00000641272 BTG4Q9NY30 223 aa24.29■■□□□ 1.48
PHGDH-213ENST00000641272 QRICH2Q9H0J4 1663 aa24.29■■□□□ 1.48
PHGDH-213ENST00000641272 NBPF1Q3BBV0 1214 aa24.26■■□□□ 1.47
PHGDH-213ENST00000641272 CDK19Q9BWU1 502 aa24.26■■□□□ 1.47
PHGDH-213ENST00000641272 FAM98CQ17RN3 349 aaKnown RBP24.24■■□□□ 1.47
PHGDH-213ENST00000641272 NUTM2GQ5VZR2 741 aa24.24■■□□□ 1.47
PHGDH-213ENST00000641272 NRKQ7Z2Y5 1582 aa24.24■■□□□ 1.47
PHGDH-213ENST00000641272 DEFB132Q7Z7B7 95 aa24.23■■□□□ 1.47
PHGDH-213ENST00000641272 CCDC125Q86Z20 511 aa24.23■■□□□ 1.47
PHGDH-213ENST00000641272 PRDM11Q9NQV5 511 aa24.23■■□□□ 1.47
PHGDH-213ENST00000641272 ZRANB1Q9UGI0 708 aa24.23■■□□□ 1.47
PHGDH-213ENST00000641272 THSD7AQ9UPZ6 1657 aa24.22■■□□□ 1.47
PHGDH-213ENST00000641272 KIAA0232Q92628 1395 aa24.22■■□□□ 1.47
PHGDH-213ENST00000641272 KRT27Q7Z3Y8 459 aa24.22■■□□□ 1.47
PHGDH-213ENST00000641272 POLR3AO14802 1390 aaPredicted RBP24.2■■□□□ 1.46
PHGDH-213ENST00000641272 ACEP12821 1306 aa24.2■■□□□ 1.46
PHGDH-213ENST00000641272 CHRNA2Q15822 529 aa24.2■■□□□ 1.46
PHGDH-213ENST00000641272 TRPM1Q7Z4N2 1603 aa24.18■■□□□ 1.46
PHGDH-213ENST00000641272 ONECUT3O60422 494 aaPredicted RBP24.18■■□□□ 1.46
PHGDH-213ENST00000641272 SF3B2Q13435 895 aaKnown RBP24.18■■□□□ 1.46
PHGDH-213ENST00000641272 PPIP5K1Q6PFW1 1433 aa24.18■■□□□ 1.46
PHGDH-213ENST00000641272 CENPJQ9HC77 1338 aaPredicted RBP24.17■■□□□ 1.46
PHGDH-213ENST00000641272 RGPD1P0DJD0 1748 aa24.17■■□□□ 1.46
PHGDH-213ENST00000641272 SPATA31A5Q5VU36 1347 aa24.16■■□□□ 1.46
PHGDH-213ENST00000641272 SPATA31A7Q8IWB4 1347 aa24.16■■□□□ 1.46
PHGDH-213ENST00000641272 ZC3H6P61129 1189 aaKnown RBP24.16■■□□□ 1.46
PHGDH-213ENST00000641272 SRPK2P78362 688 aaKnown RBP24.16■■□□□ 1.46
PHGDH-213ENST00000641272 FAM182BQ5T319 152 aa24.16■■□□□ 1.46
PHGDH-213ENST00000641272 STRN4Q9NRL3 753 aa24.15■■□□□ 1.46
PHGDH-213ENST00000641272 CCDC61Q9Y6R9 512 aa24.15■■□□□ 1.46
PHGDH-213ENST00000641272 NBPF8Q3BBV2 869 aa24.14■■□□□ 1.45
PHGDH-213ENST00000641272 TNS1Q9HBL0 1735 aaKnown RBP24.14■■□□□ 1.45
PHGDH-213ENST00000641272 CABP2Q9NPB3 220 aa24.13■■□□□ 1.45
PHGDH-213ENST00000641272 LMO7Q8WWI1 1683 aa24.12■■□□□ 1.45
PHGDH-213ENST00000641272 L3MBTL2Q969R5 705 aa24.12■■□□□ 1.45
PHGDH-213ENST00000641272 PLEKHG3A1L390 1219 aa24.11■■□□□ 1.45
PHGDH-213ENST00000641272 SIN3AQ96ST3 1273 aa24.11■■□□□ 1.45
PHGDH-213ENST00000641272 SSH2Q76I76 1423 aa24.1■■□□□ 1.45
PHGDH-213ENST00000641272 SRCAPQ6ZRS2 3230 aa24.09■■□□□ 1.45
PHGDH-213ENST00000641272 ABTB2Q8N961 1025 aa24.09■■□□□ 1.45
PHGDH-213ENST00000641272 SPATA31A1Q5TZJ5 1347 aa24.09■■□□□ 1.45
PHGDH-213ENST00000641272 CAMTA1Q9Y6Y1 1673 aa24.08■■□□□ 1.45
PHGDH-213ENST00000641272 USP35Q9P2H5 1018 aa24.08■■□□□ 1.45
PHGDH-213ENST00000641272 USP19O94966 1318 aa24.08■■□□□ 1.44
PHGDH-213ENST00000641272 PIK3C2AO00443 1686 aa24.07■■□□□ 1.44
PHGDH-213ENST00000641272 BAG6P46379 1132 aa24.06■■□□□ 1.44
PHGDH-213ENST00000641272 NEUROD1Q13562 356 aa24.06■■□□□ 1.44
PHGDH-213ENST00000641272 USP6P35125 1406 aa24.05■■□□□ 1.44
PHGDH-213ENST00000641272 ZBTB7CA1YPR0 619 aa24.04■■□□□ 1.44
PHGDH-213ENST00000641272 ROCK2O75116 1388 aaKnown RBP24.03■■□□□ 1.44
PHGDH-213ENST00000641272 CPDO75976 1380 aa24.03■■□□□ 1.44
PHGDH-213ENST00000641272 AKAP12Q02952 1782 aa24.02■■□□□ 1.44
PHGDH-213ENST00000641272 PSDA5PKW4 1024 aaPredicted RBP24.02■■□□□ 1.44
PHGDH-213ENST00000641272 CABP1Q9NZU7 370 aa24.02■■□□□ 1.44
PHGDH-213ENST00000641272 SLIT3O75094 1523 aa24.01■■□□□ 1.43
PHGDH-213ENST00000641272 EVA1CP58658 441 aa24.01■■□□□ 1.43
PHGDH-213ENST00000641272 EN1Q05925 392 aaPredicted RBP24.01■■□□□ 1.43
PHGDH-213ENST00000641272 LARP1Q6PKG0 1096 aaKnown RBP24.01■■□□□ 1.43
PHGDH-213ENST00000641272 LRP5O75197 1615 aa24.01■■□□□ 1.43
PHGDH-213ENST00000641272 COL5A2P05997 1499 aaPredicted RBP24■■□□□ 1.43
PHGDH-213ENST00000641272 NLRP13Q86W25 1043 aa23.99■■□□□ 1.43
PHGDH-213ENST00000641272 GCP02774 474 aa23.98■■□□□ 1.43
PHGDH-213ENST00000641272 EVC2Q86UK5 1308 aa23.98■■□□□ 1.43
PHGDH-213ENST00000641272 PARP4Q9UKK3 1724 aaKnown RBP23.97■■□□□ 1.43
PHGDH-213ENST00000641272 WNK3Q9BYP7 1800 aa23.96■■□□□ 1.43
PHGDH-213ENST00000641272 DISP2A7MBM2 1401 aa23.96■■□□□ 1.43
PHGDH-213ENST00000641272 BRD4O60885 1362 aaPredicted RBP23.95■■□□□ 1.42
PHGDH-213ENST00000641272 NLRP6P59044 892 aa23.95■■□□□ 1.42
PHGDH-213ENST00000641272 LRRC37A3O60309 1634 aa23.95■■□□□ 1.42
PHGDH-213ENST00000641272 TRIM37O94972 964 aa23.94■■□□□ 1.42
PHGDH-213ENST00000641272 COL18A1P39060 1754 aa23.93■■□□□ 1.42
PHGDH-213ENST00000641272 MON2Q7Z3U7 1717 aa23.93■■□□□ 1.42
PHGDH-213ENST00000641272 TCP11L2Q8N4U5 519 aa23.93■■□□□ 1.42
PHGDH-213ENST00000641272 RREB1Q92766 1687 aa23.92■■□□□ 1.42
PHGDH-213ENST00000641272 EZH2Q15910 746 aaKnown RBP23.92■■□□□ 1.42
PHGDH-213ENST00000641272 BARGINQ6ZT62 677 aa23.92■■□□□ 1.42
PHGDH-213ENST00000641272 RGPD5Q99666 1765 aa23.92■■□□□ 1.42
PHGDH-213ENST00000641272 NUP188Q5SRE5 1749 aa23.91■■□□□ 1.42
PHGDH-213ENST00000641272 SOX12O15370 315 aa23.91■■□□□ 1.42
PHGDH-213ENST00000641272 FAM196AQ6ZSG2 479 aa23.91■■□□□ 1.42
PHGDH-213ENST00000641272 CRB1P82279 1406 aa23.91■■□□□ 1.42
PHGDH-213ENST00000641272 PDE3BQ13370 1112 aa23.9■■□□□ 1.42
PHGDH-213ENST00000641272 CPSF1Q10570 1443 aaKnown RBP23.9■■□□□ 1.42
PHGDH-213ENST00000641272 R3HDM1Q15032 1099 aaKnown RBP23.89■■□□□ 1.41
PHGDH-213ENST00000641272 AATKQ6ZMQ8 1374 aa23.88■■□□□ 1.41
PHGDH-213ENST00000641272 TTC21BQ7Z4L5 1316 aa23.87■■□□□ 1.41
PHGDH-213ENST00000641272 PEAK1Q9H792 1746 aa23.87■■□□□ 1.41
PHGDH-213ENST00000641272 NFAT5O94916 1531 aa23.86■■□□□ 1.41
PHGDH-213ENST00000641272 APBA3O96018 575 aa23.86■■□□□ 1.41
PHGDH-213ENST00000641272 KTN1Q86UP2 1357 aaKnown RBP23.85■■□□□ 1.41
PHGDH-213ENST00000641272 CAMKK2Q96RR4 588 aa23.84■■□□□ 1.41
PHGDH-213ENST00000641272 THRAP3Q9Y2W1 955 aaKnown RBP23.84■■□□□ 1.41
PHGDH-213ENST00000641272 TOM1L2Q6ZVM7 507 aa23.83■■□□□ 1.41
PHGDH-213ENST00000641272 SBF2Q86WG5 1849 aa23.82■■□□□ 1.4
PHGDH-213ENST00000641272 TONSLQ96HA7 1378 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms