RNA–Protein interactions for RNA: ENST00000640769.1

RTTN-222, Transcript of rotatin, human

APPRIS P1 TSL 2 BASIC

Gene RTTN, Length 8,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-222	ENST00000640769	VGLL3	A8MV65	326 aa		10.23	□□□□□ -0.77
RTTN-222	ENST00000640769	ZBTB9	Q96C00	473 aa		10.23	□□□□□ -0.77
RTTN-222	ENST00000640769	LTV1	Q96GA3	475 aa	Predicted RBP	10.23	□□□□□ -0.77
RTTN-222	ENST00000640769	FAM107B	Q9H098	131 aa		10.23	□□□□□ -0.77
RTTN-222	ENST00000640769	RAI14	Q9P0K7	980 aa		10.23	□□□□□ -0.77
RTTN-222	ENST00000640769	IFFO1	Q0D2I5	559 aa		10.22	□□□□□ -0.77
RTTN-222	ENST00000640769	CCDC192	P0DO97	292 aa		10.22	□□□□□ -0.77
RTTN-222	ENST00000640769	CWC22	Q9HCG8	908 aa	Known RBP	10.22	□□□□□ -0.77
RTTN-222	ENST00000640769	EIF3A	Q14152	1382 aa	Known RBP	10.22	□□□□□ -0.77
RTTN-222	ENST00000640769	PDIA4	P13667	645 aa	Known RBP	10.22	□□□□□ -0.77
RTTN-222	ENST00000640769	CCDC148	Q8NFR7	591 aa		10.22	□□□□□ -0.77
RTTN-222	ENST00000640769	VPS37D	Q86XT2	251 aa		10.21	□□□□□ -0.77
RTTN-222	ENST00000640769	LRRFIP1	Q32MZ4	808 aa	Known RBP	10.21	□□□□□ -0.78
RTTN-222	ENST00000640769	LNPK	Q9C0E8	428 aa		10.21	□□□□□ -0.78
RTTN-222	ENST00000640769	SARNP	P82979	210 aa	Known RBP	10.21	□□□□□ -0.78
RTTN-222	ENST00000640769	TXLNA	P40222	546 aa		10.21	□□□□□ -0.78
RTTN-222	ENST00000640769	KRT18	P05783	430 aa	Known RBP	10.2	□□□□□ -0.78
RTTN-222	ENST00000640769	ZHX3	Q9H4I2	956 aa		10.2	□□□□□ -0.78
RTTN-222	ENST00000640769	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	10.2	□□□□□ -0.78
RTTN-222	ENST00000640769	LUC7L	Q9NQ29	371 aa	Known RBP	10.2	□□□□□ -0.78
RTTN-222	ENST00000640769	DNA2	P51530	1060 aa		10.2	□□□□□ -0.78
RTTN-222	ENST00000640769	CTR9	Q6PD62	1173 aa		10.2	□□□□□ -0.78
RTTN-222	ENST00000640769	FILIP1	Q7Z7B0	1213 aa		10.2	□□□□□ -0.78
RTTN-222	ENST00000640769	CEP57	Q86XR8	500 aa		10.2	□□□□□ -0.78
RTTN-222	ENST00000640769	PSMD1	Q99460	953 aa		10.2	□□□□□ -0.78
RTTN-222	ENST00000640769	C9orf78	Q9NZ63	289 aa	Predicted RBP	10.2	□□□□□ -0.78
RTTN-222	ENST00000640769	RSF1	Q96T23	1441 aa	Predicted RBP	10.2	□□□□□ -0.78
RTTN-222	ENST00000640769	XPC	Q01831	940 aa	Predicted RBP	10.2	□□□□□ -0.78
RTTN-222	ENST00000640769	HSP90AB4P	Q58FF6	505 aa		10.2	□□□□□ -0.78
RTTN-222	ENST00000640769	SCLT1	Q96NL6	688 aa		10.2	□□□□□ -0.78
RTTN-222	ENST00000640769	ZKSCAN2	Q63HK3	967 aa		10.19	□□□□□ -0.78
RTTN-222	ENST00000640769	MBD3	O95983	291 aa		10.19	□□□□□ -0.78
RTTN-222	ENST00000640769	CCDC178	Q5BJE1	867 aa		10.19	□□□□□ -0.78
RTTN-222	ENST00000640769	MAP9	Q49MG5	647 aa		10.19	□□□□□ -0.78
RTTN-222	ENST00000640769	CEP162	Q5TB80	1403 aa		10.19	□□□□□ -0.78
RTTN-222	ENST00000640769	PDE1C	Q14123	709 aa	Predicted RBP	10.19	□□□□□ -0.78
RTTN-222	ENST00000640769	LUZP1	Q86V48	1076 aa		10.19	□□□□□ -0.78
RTTN-222	ENST00000640769	NAA25	Q14CX7	972 aa		10.18	□□□□□ -0.78
RTTN-222	ENST00000640769	CFDP1	Q9UEE9	299 aa	Predicted RBP	10.18	□□□□□ -0.78
RTTN-222	ENST00000640769	TTC31	Q49AM3	519 aa	Predicted RBP	10.18	□□□□□ -0.78
RTTN-222	ENST00000640769	JAKMIP3	Q5VZ66	844 aa		10.18	□□□□□ -0.78
RTTN-222	ENST00000640769	RALYL	Q86SE5	291 aa	Known RBP	10.18	□□□□□ -0.78
RTTN-222	ENST00000640769	MICALL1	Q8N3F8	863 aa		10.18	□□□□□ -0.78
RTTN-222	ENST00000640769	WWC2	Q6AWC2	1192 aa		10.18	□□□□□ -0.78
RTTN-222	ENST00000640769	EPB41L2	O43491	1005 aa	Known RBP	10.18	□□□□□ -0.78
RTTN-222	ENST00000640769	KIF3C	O14782	793 aa		10.18	□□□□□ -0.78
RTTN-222	ENST00000640769	NEBL	O76041	1014 aa		10.18	□□□□□ -0.78
RTTN-222	ENST00000640769	PTPN14	Q15678	1187 aa		10.18	□□□□□ -0.78
RTTN-222	ENST00000640769	ANAPC15	P60006	121 aa		10.18	□□□□□ -0.78
RTTN-222	ENST00000640769	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	10.18	□□□□□ -0.78
RTTN-222	ENST00000640769	KIF3B	O15066	747 aa		10.17	□□□□□ -0.78
RTTN-222	ENST00000640769	STK3	Q13188	491 aa		10.17	□□□□□ -0.78
RTTN-222	ENST00000640769	CCDC6	Q16204	474 aa		10.17	□□□□□ -0.78
RTTN-222	ENST00000640769	XBP1	P17861	261 aa		10.17	□□□□□ -0.78
RTTN-222	ENST00000640769	EIF2S2	P20042	333 aa	Known RBP	10.17	□□□□□ -0.78
RTTN-222	ENST00000640769	TTC16	Q8NEE8	873 aa		10.17	□□□□□ -0.78
RTTN-222	ENST00000640769	KIF7	Q2M1P5	1343 aa		10.17	□□□□□ -0.78
RTTN-222	ENST00000640769	IK	Q13123	557 aa	Predicted RBP	10.17	□□□□□ -0.78
RTTN-222	ENST00000640769	URI1	O94763	535 aa	Predicted RBP	10.17	□□□□□ -0.78
RTTN-222	ENST00000640769	RSPH14	Q9UHP6	348 aa		10.17	□□□□□ -0.78
RTTN-222	ENST00000640769	GCOM1	H8Y6P7	765 aa	Predicted RBP	10.17	□□□□□ -0.78
RTTN-222	ENST00000640769	MYZAP	P0CAP1	466 aa		10.17	□□□□□ -0.78
RTTN-222	ENST00000640769	DZIP1	Q86YF9	867 aa	Known RBP	10.17	□□□□□ -0.78
RTTN-222	ENST00000640769	TAF4B	Q92750	862 aa		10.17	□□□□□ -0.78
RTTN-222	ENST00000640769	MIPOL1	Q8TD10	442 aa		10.16	□□□□□ -0.78
RTTN-222	ENST00000640769	CBFA2T2	O43439	604 aa		10.16	□□□□□ -0.78
RTTN-222	ENST00000640769	FAM114A1	Q8IWE2	563 aa		10.16	□□□□□ -0.78
RTTN-222	ENST00000640769	TRMT1	Q9NXH9	659 aa	Known RBP	10.16	□□□□□ -0.78
RTTN-222	ENST00000640769	CEP83	Q9Y592	693 aa		10.16	□□□□□ -0.78
RTTN-222	ENST00000640769	ME1	P48163	572 aa		10.16	□□□□□ -0.78
RTTN-222	ENST00000640769	MSL1	Q68DK7	614 aa		10.16	□□□□□ -0.78
RTTN-222	ENST00000640769	GIGYF2	Q6Y7W6	1299 aa	Known RBP	10.16	□□□□□ -0.78
RTTN-222	ENST00000640769	HYPK	Q9NX55	129 aa		10.16	□□□□□ -0.78
RTTN-222	ENST00000640769	CAMK4	Q16566	473 aa		10.16	□□□□□ -0.78
RTTN-222	ENST00000640769	ARHGAP29	Q52LW3	1261 aa		10.16	□□□□□ -0.78
RTTN-222	ENST00000640769	GSTTP1	A0A1W2PQM5	241 aa		10.16	□□□□□ -0.78
RTTN-222	ENST00000640769	MPHOSPH10	O00566	681 aa	Known RBP	10.16	□□□□□ -0.78
RTTN-222	ENST00000640769	STK38	Q15208	465 aa		10.16	□□□□□ -0.78
RTTN-222	ENST00000640769	WASHC4	Q2M389	1173 aa		10.16	□□□□□ -0.78
RTTN-222	ENST00000640769	TXLNB	Q8N3L3	684 aa		10.16	□□□□□ -0.78
RTTN-222	ENST00000640769	ZNF396	Q96N95	335 aa	Predicted RBP	10.16	□□□□□ -0.78
RTTN-222	ENST00000640769	GBP3	Q9H0R5	595 aa		10.16	□□□□□ -0.78
RTTN-222	ENST00000640769	HSPA4	P34932	840 aa		10.15	□□□□□ -0.78
RTTN-222	ENST00000640769	PPM1F	P49593	454 aa	Predicted RBP	10.15	□□□□□ -0.78
RTTN-222	ENST00000640769	SMARCC1	Q92922	1105 aa	Predicted RBP	10.15	□□□□□ -0.78
RTTN-222	ENST00000640769	TTC36	A6NLP5	189 aa		10.15	□□□□□ -0.78
RTTN-222	ENST00000640769	C16orf45	Q96MC5	204 aa	Predicted RBP	10.15	□□□□□ -0.78
RTTN-222	ENST00000640769	PDE3B	Q13370	1112 aa		10.15	□□□□□ -0.78
RTTN-222	ENST00000640769	SYCE3	A1L190	88 aa		10.15	□□□□□ -0.78
RTTN-222	ENST00000640769	C6orf163	Q5TEZ5	329 aa		10.15	□□□□□ -0.78
RTTN-222	ENST00000640769	FBF1	Q8TES7	1133 aa		10.15	□□□□□ -0.78
RTTN-222	ENST00000640769	ANKRD18B	A2A2Z9	1011 aa		10.15	□□□□□ -0.79
RTTN-222	ENST00000640769	KIF4A	O95239	1232 aa		10.14	□□□□□ -0.79
RTTN-222	ENST00000640769	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	10.14	□□□□□ -0.79
RTTN-222	ENST00000640769	FEZ2	Q9UHY8	353 aa	Predicted RBP	10.14	□□□□□ -0.79
RTTN-222	ENST00000640769	STIM1	Q13586	685 aa		10.14	□□□□□ -0.79
RTTN-222	ENST00000640769	PAIP2	Q9BPZ3	127 aa	Known RBP	10.14	□□□□□ -0.79
RTTN-222	ENST00000640769	ZSCAN30	Q86W11	494 aa		10.14	□□□□□ -0.79
RTTN-222	ENST00000640769	KIF18A	Q8NI77	898 aa		10.14	□□□□□ -0.79
RTTN-222	ENST00000640769	MATR3	P43243	847 aa	Known RBP eCLIP	10.14	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms