RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 AHDC1Q5TGY3 1603 aaPredicted RBP11.93□□□□□ -0.5
HLA-B-258ENST00000640615 FOXO3O43524 673 aa11.93□□□□□ -0.5
HLA-B-258ENST00000640615 PSME1Q06323 249 aa11.93□□□□□ -0.5
HLA-B-258ENST00000640615 TOPAZ1Q8N9V7 1692 aa11.93□□□□□ -0.5
HLA-B-258ENST00000640615 JCADQ9P266 1359 aa11.92□□□□□ -0.5
HLA-B-258ENST00000640615 RALBP1Q15311 655 aa11.92□□□□□ -0.5
HLA-B-258ENST00000640615 EDC4Q6P2E9 1401 aaKnown RBP11.92□□□□□ -0.5
HLA-B-258ENST00000640615 NPC1L1Q9UHC9 1359 aa11.92□□□□□ -0.5
HLA-B-258ENST00000640615 ITSN1Q15811 1721 aa11.91□□□□□ -0.5
HLA-B-258ENST00000640615 TTC21BQ7Z4L5 1316 aa11.91□□□□□ -0.5
HLA-B-258ENST00000640615 FYB1O15117 783 aa11.91□□□□□ -0.5
HLA-B-258ENST00000640615 MORC1Q86VD1 984 aa11.91□□□□□ -0.5
HLA-B-258ENST00000640615 GGNBP2Q9H3C7 697 aa11.91□□□□□ -0.5
HLA-B-258ENST00000640615 USP6P35125 1406 aa11.91□□□□□ -0.5
HLA-B-258ENST00000640615 SHPRHQ149N8 1683 aa11.91□□□□□ -0.5
HLA-B-258ENST00000640615 RGPD8O14715 1765 aaPredicted RBP11.9□□□□□ -0.5
HLA-B-258ENST00000640615 PAK3O75914 559 aaPredicted RBP11.9□□□□□ -0.5
HLA-B-258ENST00000640615 XPCQ01831 940 aaPredicted RBP11.9□□□□□ -0.5
HLA-B-258ENST00000640615 BRINP3Q76B58 766 aa11.9□□□□□ -0.5
HLA-B-258ENST00000640615 NME9Q86XW9 330 aa11.9□□□□□ -0.5
HLA-B-258ENST00000640615 NSD2O96028 1365 aa11.9□□□□□ -0.5
HLA-B-258ENST00000640615 KRT28Q7Z3Y7 464 aa11.89□□□□□ -0.51
HLA-B-258ENST00000640615 PARD3Q8TEW0 1356 aa11.89□□□□□ -0.51
HLA-B-258ENST00000640615 TTC21AQ8NDW8 1320 aa11.88□□□□□ -0.51
HLA-B-258ENST00000640615 TNNT2P45379 298 aaPredicted RBP11.88□□□□□ -0.51
HLA-B-258ENST00000640615 DDX17Q92841 729 aaKnown RBP11.88□□□□□ -0.51
HLA-B-258ENST00000640615 ZRANB1Q9UGI0 708 aa11.88□□□□□ -0.51
HLA-B-258ENST00000640615 LRP6O75581 1613 aa11.88□□□□□ -0.51
HLA-B-258ENST00000640615 SPATA31A6Q5VVP1 1343 aa11.87□□□□□ -0.51
HLA-B-258ENST00000640615 NPHP3Q7Z494 1330 aa11.87□□□□□ -0.51
HLA-B-258ENST00000640615 MYBBP1AQ9BQG0 1328 aaKnown RBP11.87□□□□□ -0.51
HLA-B-258ENST00000640615 SSH2Q76I76 1423 aa11.87□□□□□ -0.51
HLA-B-258ENST00000640615 ABTB2Q8N961 1025 aa11.87□□□□□ -0.51
HLA-B-258ENST00000640615 COG3Q96JB2 828 aa11.87□□□□□ -0.51
HLA-B-258ENST00000640615 BRD4O60885 1362 aaPredicted RBP11.87□□□□□ -0.51
HLA-B-258ENST00000640615 AKAP12Q02952 1782 aa11.87□□□□□ -0.51
HLA-B-258ENST00000640615 CCER2I3L3R5 266 aa11.86□□□□□ -0.51
HLA-B-258ENST00000640615 PPP2R1AP30153 589 aa11.86□□□□□ -0.51
HLA-B-258ENST00000640615 NUTM2GQ5VZR2 741 aa11.86□□□□□ -0.51
HLA-B-258ENST00000640615 LMOD2Q6P5Q4 547 aa11.86□□□□□ -0.51
HLA-B-258ENST00000640615 KIF1AQ12756 1690 aa11.86□□□□□ -0.51
HLA-B-258ENST00000640615 MON2Q7Z3U7 1717 aa11.86□□□□□ -0.51
HLA-B-258ENST00000640615 NLRP6P59044 892 aa11.85□□□□□ -0.51
HLA-B-258ENST00000640615 NHSL1Q5SYE7 1610 aa11.85□□□□□ -0.51
HLA-B-258ENST00000640615 CCDC184Q52MB2 194 aa11.84□□□□□ -0.51
HLA-B-258ENST00000640615 NLRP13Q86W25 1043 aa11.84□□□□□ -0.51
HLA-B-258ENST00000640615 MRS2Q9HD23 443 aa11.84□□□□□ -0.51
HLA-B-258ENST00000640615 NRKQ7Z2Y5 1582 aa11.83□□□□□ -0.52
HLA-B-258ENST00000640615 USP31Q70CQ4 1352 aa11.82□□□□□ -0.52
HLA-B-258ENST00000640615 SOX12O15370 315 aa11.82□□□□□ -0.52
HLA-B-258ENST00000640615 PLEKHG5O94827 1062 aa11.82□□□□□ -0.52
HLA-B-258ENST00000640615 SOS2Q07890 1332 aaPredicted RBP11.82□□□□□ -0.52
HLA-B-258ENST00000640615 CDK12Q9NYV4 1490 aaPredicted RBP11.82□□□□□ -0.52
HLA-B-258ENST00000640615 SBNO1A3KN83 1393 aa11.81□□□□□ -0.52
HLA-B-258ENST00000640615 FBLN1P23142 703 aa11.81□□□□□ -0.52
HLA-B-258ENST00000640615 MTHFSP49914 203 aa11.81□□□□□ -0.52
HLA-B-258ENST00000640615 OVOS2A0A0J9YW53 1432 aa11.8□□□□□ -0.52
HLA-B-258ENST00000640615 OVOS2Q6IE36 1432 aa11.8□□□□□ -0.52
HLA-B-258ENST00000640615 KIF20BQ96Q89 1820 aa11.8□□□□□ -0.52
HLA-B-258ENST00000640615 PXDNQ92626 1479 aa11.8□□□□□ -0.52
HLA-B-258ENST00000640615 SPATA31A3Q5VYP0 1347 aa11.8□□□□□ -0.52
HLA-B-258ENST00000640615 PPM1GO15355 546 aaPredicted RBP11.79□□□□□ -0.52
HLA-B-258ENST00000640615 ZNF772Q68DY9 489 aaPredicted RBP11.79□□□□□ -0.52
HLA-B-258ENST00000640615 TNS3Q68CZ2 1445 aa11.78□□□□□ -0.52
HLA-B-258ENST00000640615 RRS1Q15050 365 aaKnown RBP11.78□□□□□ -0.52
HLA-B-258ENST00000640615 CFAP53Q96M91 514 aa11.78□□□□□ -0.52
HLA-B-258ENST00000640615 POLKQ9UBT6 870 aa11.78□□□□□ -0.52
HLA-B-258ENST00000640615 ARHGEF10O15013 1369 aa11.78□□□□□ -0.52
HLA-B-258ENST00000640615 AATKQ6ZMQ8 1374 aa11.78□□□□□ -0.52
HLA-B-258ENST00000640615 PIK3C2AO00443 1686 aa11.78□□□□□ -0.52
HLA-B-258ENST00000640615 KCNH5Q8NCM2 988 aa11.77□□□□□ -0.53
HLA-B-258ENST00000640615 LRRC59Q96AG4 307 aaKnown RBP11.77□□□□□ -0.53
HLA-B-258ENST00000640615 EMILIN1Q9Y6C2 1016 aa11.77□□□□□ -0.53
HLA-B-258ENST00000640615 TRPM3Q9HCF6 1732 aaPredicted RBP11.77□□□□□ -0.53
HLA-B-258ENST00000640615 GCP02774 474 aa11.76□□□□□ -0.53
HLA-B-258ENST00000640615 FAM9BQ8IZU0 186 aa11.76□□□□□ -0.53
HLA-B-258ENST00000640615 CABLES1Q8TDN4 633 aa11.76□□□□□ -0.53
HLA-B-258ENST00000640615 UPF1Q92900 1129 aaKnown RBP eCLIP11.76□□□□□ -0.535e-6■■■■□ 20.6
HLA-B-258ENST00000640615 ANKRD26Q9UPS8 1709 aa11.76□□□□□ -0.53
HLA-B-258ENST00000640615 ZBTB7CA1YPR0 619 aa11.75□□□□□ -0.53
HLA-B-258ENST00000640615 PNISRQ8TF01 805 aaKnown RBP11.75□□□□□ -0.53
HLA-B-258ENST00000640615 USP19O94966 1318 aa11.75□□□□□ -0.53
HLA-B-258ENST00000640615 PNPLA6Q8IY17 1366 aa11.75□□□□□ -0.53
HLA-B-258ENST00000640615 AMPHP49418 695 aa11.74□□□□□ -0.53
HLA-B-258ENST00000640615 HAP1P54257 671 aaPredicted RBP11.74□□□□□ -0.53
HLA-B-258ENST00000640615 MAP3K19Q56UN5 1328 aa11.74□□□□□ -0.53
HLA-B-258ENST00000640615 WDR43Q15061 677 aaKnown RBP eCLIP11.73□□□□□ -0.53
HLA-B-258ENST00000640615 ALS2Q96Q42 1657 aa11.73□□□□□ -0.53
HLA-B-258ENST00000640615 DIAPH1O60610 1272 aaKnown RBP11.72□□□□□ -0.53
HLA-B-258ENST00000640615 RXRBP28702 533 aa11.72□□□□□ -0.53
HLA-B-258ENST00000640615 ZC3H6P61129 1189 aaKnown RBP11.72□□□□□ -0.53
HLA-B-258ENST00000640615 MEX3CQ5U5Q3 659 aaKnown RBP11.72□□□□□ -0.53
HLA-B-258ENST00000640615 YTHDC1Q96MU7 727 aaKnown RBP11.72□□□□□ -0.53
HLA-B-258ENST00000640615 NUDCQ9Y266 331 aa11.72□□□□□ -0.53
HLA-B-258ENST00000640615 COL22A1Q8NFW1 1626 aaPredicted RBP11.71□□□□□ -0.53
HLA-B-258ENST00000640615 SLIT3O75094 1523 aa11.71□□□□□ -0.53
HLA-B-258ENST00000640615 SMG6Q86US8 1419 aaKnown RBP11.71□□□□□ -0.53
HLA-B-258ENST00000640615 AFF2P51816 1311 aa11.71□□□□□ -0.53
HLA-B-258ENST00000640615 HSP90AB2PQ58FF8 381 aa11.71□□□□□ -0.53
HLA-B-258ENST00000640615 ARHGEF25Q86VW2 580 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms