RNA–Protein interactions for RNA: ENST00000640552.1

GFAP-237, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 3,573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-237ENST00000640552 RIMS2Q9UQ26 1411 aa17.89■□□□□ 0.45
GFAP-237ENST00000640552 GLI2P10070 1586 aa17.89■□□□□ 0.45
GFAP-237ENST00000640552 NGEFQ8N5V2 710 aa17.89■□□□□ 0.45
GFAP-237ENST00000640552 KDM2BQ8NHM5 1336 aa17.88■□□□□ 0.45
GFAP-237ENST00000640552 LTV1Q96GA3 475 aaPredicted RBP17.88■□□□□ 0.45
GFAP-237ENST00000640552 C1orf115Q9H7X2 142 aa17.88■□□□□ 0.45
GFAP-237ENST00000640552 CAMSAP1Q5T5Y3 1602 aa17.88■□□□□ 0.45
GFAP-237ENST00000640552 ADGRB1O14514 1584 aa17.88■□□□□ 0.45
GFAP-237ENST00000640552 NGDNQ8NEJ9 315 aaKnown RBP17.87■□□□□ 0.45
GFAP-237ENST00000640552 ZMYM3Q14202 1370 aa17.86■□□□□ 0.45
GFAP-237ENST00000640552 CCDC61Q9Y6R9 512 aa17.86■□□□□ 0.45
GFAP-237ENST00000640552 TULP4Q9NRJ4 1543 aa17.86■□□□□ 0.45
GFAP-237ENST00000640552 NRXN1Q9ULB1 1477 aa17.86■□□□□ 0.45
GFAP-237ENST00000640552 APBB1O00213 710 aa17.86■□□□□ 0.45
GFAP-237ENST00000640552 DDRGK1Q96HY6 314 aa17.86■□□□□ 0.45
GFAP-237ENST00000640552 RWDD1Q9H446 243 aaPredicted RBP17.86■□□□□ 0.45
GFAP-237ENST00000640552 TRIM35Q9UPQ4 493 aa17.86■□□□□ 0.45
GFAP-237ENST00000640552 PDZRN3Q9UPQ7 1066 aa17.86■□□□□ 0.45
GFAP-237ENST00000640552 METP08581 1390 aa17.85■□□□□ 0.45
GFAP-237ENST00000640552 SLKQ9H2G2 1235 aaPredicted RBP17.85■□□□□ 0.45
GFAP-237ENST00000640552 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.85■□□□□ 0.45
GFAP-237ENST00000640552 PNNQ9H307 717 aaKnown RBP17.85■□□□□ 0.45
GFAP-237ENST00000640552 SIGLEC1Q9BZZ2 1709 aa17.85■□□□□ 0.45
GFAP-237ENST00000640552 INSRP06213 1382 aa17.85■□□□□ 0.45
GFAP-237ENST00000640552 TRIM27P14373 513 aa17.84■□□□□ 0.45
GFAP-237ENST00000640552 EID1Q9Y6B2 187 aa17.84■□□□□ 0.45
GFAP-237ENST00000640552 LMOD2Q6P5Q4 547 aa17.84■□□□□ 0.45
GFAP-237ENST00000640552 NEXMIFQ5QGS0 1516 aa17.84■□□□□ 0.45
GFAP-237ENST00000640552 UPF2Q9HAU5 1272 aaKnown RBP17.84■□□□□ 0.45
GFAP-237ENST00000640552 SULT6B1Q6IMI4 303 aa17.83■□□□□ 0.45
GFAP-237ENST00000640552 ABCC11Q96J66 1382 aa17.83■□□□□ 0.45
GFAP-237ENST00000640552 TMEM57Q8N5G2 664 aa17.83■□□□□ 0.44
GFAP-237ENST00000640552 SEC24BO95487 1268 aa17.83■□□□□ 0.44
GFAP-237ENST00000640552 C8orf34Q49A92 452 aa17.83■□□□□ 0.44
GFAP-237ENST00000640552 AEBP1Q8IUX7 1158 aa17.82■□□□□ 0.44
GFAP-237ENST00000640552 PPLO60437 1756 aa17.82■□□□□ 0.44
GFAP-237ENST00000640552 MVPQ14764 893 aaKnown RBP17.82■□□□□ 0.44
GFAP-237ENST00000640552 ARXQ96QS3 562 aa17.82■□□□□ 0.44
GFAP-237ENST00000640552 MIS18AQ9NYP9 233 aa17.81■□□□□ 0.44
GFAP-237ENST00000640552 KIAA1210Q9ULL0 1709 aa17.81■□□□□ 0.44
GFAP-237ENST00000640552 MFAP1P55081 439 aaKnown RBP17.81■□□□□ 0.44
GFAP-237ENST00000640552 TSPYL6Q8N831 410 aa17.81■□□□□ 0.44
GFAP-237ENST00000640552 PPIP5K1Q6PFW1 1433 aa17.81■□□□□ 0.44
GFAP-237ENST00000640552 LTKP29376 864 aa17.8■□□□□ 0.44
GFAP-237ENST00000640552 LNPKQ9C0E8 428 aa17.8■□□□□ 0.44
GFAP-237ENST00000640552 PIK3C2BO00750 1634 aa17.8■□□□□ 0.44
GFAP-237ENST00000640552 ATF7IPQ6VMQ6 1270 aa17.8■□□□□ 0.44
GFAP-237ENST00000640552 NSD2O96028 1365 aa17.8■□□□□ 0.44
GFAP-237ENST00000640552 FCHSD2O94868 740 aa17.8■□□□□ 0.44
GFAP-237ENST00000640552 NECTIN2Q92692 538 aa17.8■□□□□ 0.44
GFAP-237ENST00000640552 PLEKHF1Q96S99 279 aa17.79■□□□□ 0.44
GFAP-237ENST00000640552 ARHGAP31Q2M1Z3 1444 aa17.79■□□□□ 0.44
GFAP-237ENST00000640552 IPO8O15397 1037 aaKnown RBP17.79■□□□□ 0.44
GFAP-237ENST00000640552 MYO5BQ9ULV0 1848 aa17.79■□□□□ 0.44
GFAP-237ENST00000640552 SETBP1Q9Y6X0 1596 aa17.78■□□□□ 0.44
GFAP-237ENST00000640552 MCM10Q7L590 875 aa17.78■□□□□ 0.44
GFAP-237ENST00000640552 KRT24Q2M2I5 525 aa17.78■□□□□ 0.44
GFAP-237ENST00000640552 HSP90AB2PQ58FF8 381 aa17.78■□□□□ 0.44
GFAP-237ENST00000640552 PUS7Q96PZ0 661 aaKnown RBP17.78■□□□□ 0.44
GFAP-237ENST00000640552 AMPHP49418 695 aa17.77■□□□□ 0.44
GFAP-237ENST00000640552 AMOTL2Q9Y2J4 779 aa17.77■□□□□ 0.43
GFAP-237ENST00000640552 ACEP12821 1306 aa17.76■□□□□ 0.43
GFAP-237ENST00000640552 TNRQ92752 1358 aa17.76■□□□□ 0.43
GFAP-237ENST00000640552 CCDC27Q2M243 656 aa17.76■□□□□ 0.43
GFAP-237ENST00000640552 NFE2L2Q16236 605 aa17.76■□□□□ 0.43
GFAP-237ENST00000640552 RSPH6AQ9H0K4 717 aa17.76■□□□□ 0.43
GFAP-237ENST00000640552 DDX19BQ9UMR2 479 aa17.76■□□□□ 0.43
GFAP-237ENST00000640552 RIMBP3CA6NJZ7 1639 aa17.75■□□□□ 0.43
GFAP-237ENST00000640552 RIMBP3BA6NNM3 1639 aa17.75■□□□□ 0.43
GFAP-237ENST00000640552 RIMBP3Q9UFD9 1639 aa17.75■□□□□ 0.43
GFAP-237ENST00000640552 PTPRMP28827 1452 aa17.74■□□□□ 0.43
GFAP-237ENST00000640552 ANKRD45Q5TZF3 282 aa17.74■□□□□ 0.43
GFAP-237ENST00000640552 TWISTNBQ3B726 338 aaPredicted RBP17.74■□□□□ 0.43
GFAP-237ENST00000640552 SLC4A10Q6U841 1118 aa17.74■□□□□ 0.43
GFAP-237ENST00000640552 IFT172Q9UG01 1749 aa17.74■□□□□ 0.43
GFAP-237ENST00000640552 ALKQ9UM73 1620 aa17.73■□□□□ 0.43
GFAP-237ENST00000640552 A2ML1A8K2U0 1454 aa17.73■□□□□ 0.43
GFAP-237ENST00000640552 NLRP6P59044 892 aa17.73■□□□□ 0.43
GFAP-237ENST00000640552 MBIPQ9NS73 344 aa17.73■□□□□ 0.43
GFAP-237ENST00000640552 RICTORQ6R327 1708 aa17.72■□□□□ 0.43
GFAP-237ENST00000640552 PRR36Q9H6K5 1346 aa17.72■□□□□ 0.43
GFAP-237ENST00000640552 NINLQ9Y2I6 1382 aa17.72■□□□□ 0.43
GFAP-237ENST00000640552 C8orf58Q8NAV2 365 aa17.71■□□□□ 0.43
GFAP-237ENST00000640552 PHF23Q9BUL5 403 aaPredicted RBP17.71■□□□□ 0.43
GFAP-237ENST00000640552 PPP6R1Q9UPN7 881 aa17.71■□□□□ 0.43
GFAP-237ENST00000640552 GNAI1P63096 354 aa17.71■□□□□ 0.43
GFAP-237ENST00000640552 RTF1Q92541 710 aaKnown RBP17.7■□□□□ 0.42
GFAP-237ENST00000640552 FOXO3O43524 673 aa17.7■□□□□ 0.42
GFAP-237ENST00000640552 CLTCQ00610 1675 aaKnown RBP17.7■□□□□ 0.42
GFAP-237ENST00000640552 PREX1Q8TCU6 1659 aa17.7■□□□□ 0.42
GFAP-237ENST00000640552 KIF16BQ96L93 1317 aa17.69■□□□□ 0.42
GFAP-237ENST00000640552 ARHGEF28Q8N1W1 1705 aaKnown RBP17.69■□□□□ 0.42
GFAP-237ENST00000640552 IL13P35225 146 aa17.69■□□□□ 0.42
GFAP-237ENST00000640552 XPCQ01831 940 aaPredicted RBP17.69■□□□□ 0.42
GFAP-237ENST00000640552 ZC3H13Q5T200 1668 aaKnown RBP17.69■□□□□ 0.42
GFAP-237ENST00000640552 CALD1Q05682 793 aaKnown RBP17.69■□□□□ 0.42
GFAP-237ENST00000640552 ZNF692Q9BU19 519 aaPredicted RBP17.69■□□□□ 0.42
GFAP-237ENST00000640552 ZFYVE9O95405 1425 aa17.68■□□□□ 0.42
GFAP-237ENST00000640552 ROBO2Q9HCK4 1378 aa17.68■□□□□ 0.42
GFAP-237ENST00000640552 EIF4A2Q14240 407 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms