RNA–Protein interactions for RNA: ENST00000640043.1

MCF2L2-214, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 5

Gene MCF2L2, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-214ENST00000640043 ARHGEF10O15013 1369 aa13.78□□□□□ -0.2
MCF2L2-214ENST00000640043 TNS3Q68CZ2 1445 aa13.78□□□□□ -0.2
MCF2L2-214ENST00000640043 SBNO1A3KN83 1393 aa13.77□□□□□ -0.21
MCF2L2-214ENST00000640043 BAG6P46379 1132 aa13.77□□□□□ -0.21
MCF2L2-214ENST00000640043 XPCQ01831 940 aaPredicted RBP13.77□□□□□ -0.21
MCF2L2-214ENST00000640043 PLCH1Q4KWH8 1693 aa13.77□□□□□ -0.21
MCF2L2-214ENST00000640043 KRT27Q7Z3Y8 459 aa13.77□□□□□ -0.21
MCF2L2-214ENST00000640043 BRPF1P55201 1214 aaPredicted RBP13.76□□□□□ -0.21
MCF2L2-214ENST00000640043 KRT28Q7Z3Y7 464 aa13.76□□□□□ -0.21
MCF2L2-214ENST00000640043 DEFB132Q7Z7B7 95 aa13.76□□□□□ -0.21
MCF2L2-214ENST00000640043 IFT172Q9UG01 1749 aa13.75□□□□□ -0.21
MCF2L2-214ENST00000640043 ABCA3Q99758 1704 aa13.74□□□□□ -0.21
MCF2L2-214ENST00000640043 PIK3C2GO75747 1445 aa13.73□□□□□ -0.21
MCF2L2-214ENST00000640043 RGPD1P0DJD0 1748 aa13.73□□□□□ -0.21
MCF2L2-214ENST00000640043 WAPLQ7Z5K2 1190 aa13.73□□□□□ -0.21
MCF2L2-214ENST00000640043 PHF8Q9UPP1 1060 aa13.73□□□□□ -0.21
MCF2L2-214ENST00000640043 NRXN1Q9ULB1 1477 aa13.73□□□□□ -0.21
MCF2L2-214ENST00000640043 DISP2A7MBM2 1401 aa13.73□□□□□ -0.21
MCF2L2-214ENST00000640043 SPATA31E1Q6ZUB1 1445 aa13.73□□□□□ -0.21
MCF2L2-214ENST00000640043 YTHDC2Q9H6S0 1430 aaKnown RBP13.73□□□□□ -0.21
MCF2L2-214ENST00000640043 ADGRF5Q8IZF2 1346 aa13.72□□□□□ -0.21
MCF2L2-214ENST00000640043 RGPD8O14715 1765 aaPredicted RBP13.71□□□□□ -0.21
MCF2L2-214ENST00000640043 STK26Q9P289 416 aa13.71□□□□□ -0.21
MCF2L2-214ENST00000640043 ANKARQ7Z5J8 1434 aa13.71□□□□□ -0.22
MCF2L2-214ENST00000640043 ACIN1Q9UKV3 1341 aaKnown RBP13.7□□□□□ -0.22
MCF2L2-214ENST00000640043 NUTM2FA1L443 756 aa13.7□□□□□ -0.22
MCF2L2-214ENST00000640043 CCDC9Q9Y3X0 531 aaKnown RBP13.7□□□□□ -0.22
MCF2L2-214ENST00000640043 NRAPQ86VF7 1730 aa13.7□□□□□ -0.22
MCF2L2-214ENST00000640043 PLEKHH1Q9ULM0 1364 aa13.7□□□□□ -0.22
MCF2L2-214ENST00000640043 COL14A1Q05707 1796 aaKnown RBP13.69□□□□□ -0.22
MCF2L2-214ENST00000640043 PARD3Q8TEW0 1356 aa13.68□□□□□ -0.22
MCF2L2-214ENST00000640043 FAM83GA6ND36 823 aa13.67□□□□□ -0.22
MCF2L2-214ENST00000640043 C14orf93Q9H972 538 aaKnown RBP13.67□□□□□ -0.22
MCF2L2-214ENST00000640043 EIF3AQ14152 1382 aaKnown RBP13.67□□□□□ -0.22
MCF2L2-214ENST00000640043 DHX57Q6P158 1386 aaKnown RBP13.67□□□□□ -0.22
MCF2L2-214ENST00000640043 ADGRB2O60241 1585 aa13.66□□□□□ -0.22
MCF2L2-214ENST00000640043 DLC1Q96QB1 1528 aa13.66□□□□□ -0.22
MCF2L2-214ENST00000640043 TMEM132EQ6IEE7 984 aa13.66□□□□□ -0.22
MCF2L2-214ENST00000640043 SAMD1Q6SPF0 538 aaPredicted RBP13.66□□□□□ -0.22
MCF2L2-214ENST00000640043 CABLES1Q8TDN4 633 aa13.66□□□□□ -0.22
MCF2L2-214ENST00000640043 A0A0G2JS52 829 aa13.65□□□□□ -0.22
MCF2L2-214ENST00000640043 PSDA5PKW4 1024 aaPredicted RBP13.65□□□□□ -0.22
MCF2L2-214ENST00000640043 THSD7AQ9UPZ6 1657 aa13.65□□□□□ -0.22
MCF2L2-214ENST00000640043 SPATA31A5Q5VU36 1347 aa13.64□□□□□ -0.23
MCF2L2-214ENST00000640043 SPATA31A7Q8IWB4 1347 aa13.64□□□□□ -0.23
MCF2L2-214ENST00000640043 TRPM3Q9HCF6 1732 aaPredicted RBP13.64□□□□□ -0.23
MCF2L2-214ENST00000640043 ALS2Q96Q42 1657 aa13.64□□□□□ -0.23
MCF2L2-214ENST00000640043 GPRASP1Q5JY77 1395 aa13.64□□□□□ -0.23
MCF2L2-214ENST00000640043 FAM98CQ17RN3 349 aaKnown RBP13.64□□□□□ -0.23
MCF2L2-214ENST00000640043 RGL3Q3MIN7 710 aa13.64□□□□□ -0.23
MCF2L2-214ENST00000640043 LMOD2Q6P5Q4 547 aa13.64□□□□□ -0.23
MCF2L2-214ENST00000640043 BTG4Q9NY30 223 aa13.64□□□□□ -0.23
MCF2L2-214ENST00000640043 TNS1Q9HBL0 1735 aaKnown RBP13.64□□□□□ -0.23
MCF2L2-214ENST00000640043 ZMYND15Q9H091 742 aa13.63□□□□□ -0.23
MCF2L2-214ENST00000640043 EN1Q05925 392 aaPredicted RBP13.62□□□□□ -0.23
MCF2L2-214ENST00000640043 FAM196AQ6ZSG2 479 aa13.61□□□□□ -0.23
MCF2L2-214ENST00000640043 RSPH6AQ9H0K4 717 aa13.61□□□□□ -0.23
MCF2L2-214ENST00000640043 R3HDM1Q15032 1099 aaKnown RBP13.6□□□□□ -0.23
MCF2L2-214ENST00000640043 PRAM1Q96QH2 718 aa13.6□□□□□ -0.23
MCF2L2-214ENST00000640043 CRYBG1Q9Y4K1 1723 aa13.6□□□□□ -0.23
MCF2L2-214ENST00000640043 ZBTB7CA1YPR0 619 aa13.59□□□□□ -0.23
MCF2L2-214ENST00000640043 CAMKK2Q96RR4 588 aa13.59□□□□□ -0.23
MCF2L2-214ENST00000640043 MPHOSPH9Q99550 1183 aa13.59□□□□□ -0.23
MCF2L2-214ENST00000640043 C11orf95C9JLR9 678 aaPredicted RBP13.58□□□□□ -0.24
MCF2L2-214ENST00000640043 POGKQ9P215 609 aa13.58□□□□□ -0.24
MCF2L2-214ENST00000640043 TULP4Q9NRJ4 1543 aa13.58□□□□□ -0.24
MCF2L2-214ENST00000640043 NEUROD2Q15784 382 aa13.57□□□□□ -0.24
MCF2L2-214ENST00000640043 PMFBP1Q8TBY8 1022 aa13.57□□□□□ -0.24
MCF2L2-214ENST00000640043 SPATA31A1Q5TZJ5 1347 aa13.57□□□□□ -0.24
MCF2L2-214ENST00000640043 RREB1Q92766 1687 aa13.56□□□□□ -0.24
MCF2L2-214ENST00000640043 ITSN1Q15811 1721 aa13.56□□□□□ -0.24
MCF2L2-214ENST00000640043 CFAP70Q5T0N1 1121 aa13.56□□□□□ -0.24
MCF2L2-214ENST00000640043 PPARGC1BQ86YN6 1023 aaKnown RBP13.56□□□□□ -0.24
MCF2L2-214ENST00000640043 STAC3Q96MF2 364 aa13.56□□□□□ -0.24
MCF2L2-214ENST00000640043 PRDM11Q9NQV5 511 aa13.56□□□□□ -0.24
MCF2L2-214ENST00000640043 ZNF219Q9P2Y4 722 aaPredicted RBP13.56□□□□□ -0.24
MCF2L2-214ENST00000640043 ATP7BP35670 1465 aa13.55□□□□□ -0.24
MCF2L2-214ENST00000640043 EZH2Q15910 746 aaKnown RBP13.55□□□□□ -0.24
MCF2L2-214ENST00000640043 BARGINQ6ZT62 677 aa13.55□□□□□ -0.24
MCF2L2-214ENST00000640043 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.55□□□□□ -0.24
MCF2L2-214ENST00000640043 HS6ST3Q8IZP7 471 aa13.55□□□□□ -0.24
MCF2L2-214ENST00000640043 ADGRB1O14514 1584 aa13.54□□□□□ -0.24
MCF2L2-214ENST00000640043 DCAF8L1A6NGE4 600 aa13.54□□□□□ -0.24
MCF2L2-214ENST00000640043 NBPF8Q3BBV2 869 aa13.54□□□□□ -0.24
MCF2L2-214ENST00000640043 NBPF14Q5TI25 921 aa13.54□□□□□ -0.24
MCF2L2-214ENST00000640043 WASLO00401 505 aaPredicted RBP13.53□□□□□ -0.24
MCF2L2-214ENST00000640043 PLEKHG5O94827 1062 aa13.53□□□□□ -0.24
MCF2L2-214ENST00000640043 YY1P25490 414 aa13.53□□□□□ -0.24
MCF2L2-214ENST00000640043 SAFB2Q14151 953 aaKnown RBP eCLIP13.53□□□□□ -0.24
MCF2L2-214ENST00000640043 NGDNQ8NEJ9 315 aaKnown RBP13.53□□□□□ -0.24
MCF2L2-214ENST00000640043 NINLQ9Y2I6 1382 aa13.53□□□□□ -0.24
MCF2L2-214ENST00000640043 NUP188Q5SRE5 1749 aa13.53□□□□□ -0.24
MCF2L2-214ENST00000640043 TRIM37O94972 964 aa13.52□□□□□ -0.25
MCF2L2-214ENST00000640043 APBA3O96018 575 aa13.52□□□□□ -0.25
MCF2L2-214ENST00000640043 FAM182BQ5T319 152 aa13.52□□□□□ -0.25
MCF2L2-214ENST00000640043 RGPD3A6NKT7 1758 aaPredicted RBP13.51□□□□□ -0.25
MCF2L2-214ENST00000640043 RGPD4Q7Z3J3 1758 aa13.51□□□□□ -0.25
MCF2L2-214ENST00000640043 KIAA0232Q92628 1395 aa13.51□□□□□ -0.25
MCF2L2-214ENST00000640043 PRR36Q9H6K5 1346 aa13.51□□□□□ -0.25
MCF2L2-214ENST00000640043 PHRF1Q9P1Y6 1649 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms