RNA–Protein interactions for RNA: ENST00000640021.1

NOTCH2-208, Transcript of notch 2, humanhuman

TSL 5

Gene NOTCH2, Length 2,058 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2-208ENST00000640021 IL16Q14005 1332 aa15.76■□□□□ 0.11
NOTCH2-208ENST00000640021 UPF2Q9HAU5 1272 aaKnown RBP15.76■□□□□ 0.11
NOTCH2-208ENST00000640021 COL3A1P02461 1466 aaPredicted RBP15.76■□□□□ 0.11
NOTCH2-208ENST00000640021 BECN1Q14457 450 aa15.75■□□□□ 0.11
NOTCH2-208ENST00000640021 PDZRN3Q9UPQ7 1066 aa15.75■□□□□ 0.11
NOTCH2-208ENST00000640021 TNNQ9UQP3 1299 aa15.75■□□□□ 0.11
NOTCH2-208ENST00000640021 USP19O94966 1318 aa15.75■□□□□ 0.11
NOTCH2-208ENST00000640021 DIAPH1O60610 1272 aaKnown RBP15.74■□□□□ 0.11
NOTCH2-208ENST00000640021 SMC4Q9NTJ3 1288 aa15.74■□□□□ 0.11
NOTCH2-208ENST00000640021 ALKQ9UM73 1620 aa15.74■□□□□ 0.11
NOTCH2-208ENST00000640021 CD163L1Q9NR16 1453 aa15.74■□□□□ 0.11
NOTCH2-208ENST00000640021 KIF20BQ96Q89 1820 aa15.74■□□□□ 0.11
NOTCH2-208ENST00000640021 EXOSC9Q06265 439 aaKnown RBP15.74■□□□□ 0.11
NOTCH2-208ENST00000640021 STAG3Q9UJ98 1225 aa15.74■□□□□ 0.11
NOTCH2-208ENST00000640021 GSE1Q14687 1217 aa15.73■□□□□ 0.11
NOTCH2-208ENST00000640021 TSR2Q969E8 191 aaKnown RBP15.73■□□□□ 0.11
NOTCH2-208ENST00000640021 CDK19Q9BWU1 502 aa15.73■□□□□ 0.11
NOTCH2-208ENST00000640021 TRIM35Q9UPQ4 493 aa15.73■□□□□ 0.11
NOTCH2-208ENST00000640021 NLRP1Q9C000 1473 aa15.72■□□□□ 0.11
NOTCH2-208ENST00000640021 RIPK4P57078 832 aa15.72■□□□□ 0.11
NOTCH2-208ENST00000640021 SENP3Q9H4L4 574 aaPredicted RBP15.72■□□□□ 0.11
NOTCH2-208ENST00000640021 DDX19BQ9UMR2 479 aa15.72■□□□□ 0.11
NOTCH2-208ENST00000640021 PNPLA6Q8IY17 1366 aa15.71■□□□□ 0.11
NOTCH2-208ENST00000640021 SEC24BO95487 1268 aa15.71■□□□□ 0.11
NOTCH2-208ENST00000640021 PPP6R1Q9UPN7 881 aa15.71■□□□□ 0.11
NOTCH2-208ENST00000640021 ARHGEF40Q8TER5 1519 aa15.7■□□□□ 0.1
NOTCH2-208ENST00000640021 FCHSD2O94868 740 aa15.7■□□□□ 0.1
NOTCH2-208ENST00000640021 FBXO31Q5XUX0 539 aaPredicted RBP15.7■□□□□ 0.1
NOTCH2-208ENST00000640021 ATF7IPQ6VMQ6 1270 aa15.7■□□□□ 0.1
NOTCH2-208ENST00000640021 IPO8O15397 1037 aaKnown RBP15.69■□□□□ 0.1
NOTCH2-208ENST00000640021 CABP1Q9NZU7 370 aa15.69■□□□□ 0.1
NOTCH2-208ENST00000640021 TRIM27P14373 513 aa15.69■□□□□ 0.1
NOTCH2-208ENST00000640021 SSH1Q8WYL5 1049 aa15.69■□□□□ 0.1
NOTCH2-208ENST00000640021 DLC1Q96QB1 1528 aa15.68■□□□□ 0.1
NOTCH2-208ENST00000640021 HDAC1Q13547 482 aaPredicted RBP15.68■□□□□ 0.1
NOTCH2-208ENST00000640021 KIF16BQ96L93 1317 aa15.68■□□□□ 0.1
NOTCH2-208ENST00000640021 ITPRIPQ8IWB1 547 aa15.67■□□□□ 0.1
NOTCH2-208ENST00000640021 CDC42BPGQ6DT37 1551 aa15.67■□□□□ 0.1
NOTCH2-208ENST00000640021 ATP7BP35670 1465 aa15.67■□□□□ 0.1
NOTCH2-208ENST00000640021 ALDH1L2Q3SY69 923 aa15.67■□□□□ 0.1
NOTCH2-208ENST00000640021 NOB1Q9ULX3 412 aaKnown RBP15.67■□□□□ 0.1
NOTCH2-208ENST00000640021 TBC1D32Q96NH3 1257 aa15.66■□□□□ 0.1
NOTCH2-208ENST00000640021 FRAT2O75474 233 aaPredicted RBP15.66■□□□□ 0.1
NOTCH2-208ENST00000640021 ZNF428Q96B54 188 aa15.66■□□□□ 0.1
NOTCH2-208ENST00000640021 REREQ9P2R6 1566 aa15.65■□□□□ 0.1
NOTCH2-208ENST00000640021 AGLP35573 1532 aa15.64■□□□□ 0.09
NOTCH2-208ENST00000640021 MAP2P11137 1827 aaKnown RBP15.64■□□□□ 0.09
NOTCH2-208ENST00000640021 CALD1Q05682 793 aaKnown RBP15.64■□□□□ 0.09
NOTCH2-208ENST00000640021 LRRC7Q96NW7 1537 aa15.63■□□□□ 0.09
NOTCH2-208ENST00000640021 A2ML1A8K2U0 1454 aa15.63■□□□□ 0.09
NOTCH2-208ENST00000640021 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.63■□□□□ 0.09
NOTCH2-208ENST00000640021 RSPH6AQ9H0K4 717 aa15.63■□□□□ 0.09
NOTCH2-208ENST00000640021 POLKQ9UBT6 870 aa15.63■□□□□ 0.09
NOTCH2-208ENST00000640021 FAM135BQ49AJ0 1406 aa15.62■□□□□ 0.09
NOTCH2-208ENST00000640021 PRKAR2BP31323 418 aa15.62■□□□□ 0.09
NOTCH2-208ENST00000640021 TMEM57Q8N5G2 664 aa15.62■□□□□ 0.09
NOTCH2-208ENST00000640021 CHMP4BQ9H444 224 aaKnown RBP15.62■□□□□ 0.09
NOTCH2-208ENST00000640021 SPATA31D1Q6ZQQ2 1576 aa15.61■□□□□ 0.09
NOTCH2-208ENST00000640021 RIMS2Q9UQ26 1411 aa15.61■□□□□ 0.09
NOTCH2-208ENST00000640021 BRPF1P55201 1214 aaPredicted RBP15.61■□□□□ 0.09
NOTCH2-208ENST00000640021 SMC5Q8IY18 1101 aa15.61■□□□□ 0.09
NOTCH2-208ENST00000640021 ZBTB40Q9NUA8 1239 aa15.61■□□□□ 0.09
NOTCH2-208ENST00000640021 FAM69CQ0P6D2 419 aa15.61■□□□□ 0.09
NOTCH2-208ENST00000640021 WAPLQ7Z5K2 1190 aa15.61■□□□□ 0.09
NOTCH2-208ENST00000640021 SETD1AO15047 1707 aaKnown RBP15.61■□□□□ 0.09
NOTCH2-208ENST00000640021 PPIP5K1Q6PFW1 1433 aa15.6■□□□□ 0.09
NOTCH2-208ENST00000640021 NFE2L2Q16236 605 aa15.6■□□□□ 0.09
NOTCH2-208ENST00000640021 CYB5RLQ6IPT4 315 aa15.59■□□□□ 0.09
NOTCH2-208ENST00000640021 EDC4Q6P2E9 1401 aaKnown RBP15.59■□□□□ 0.09
NOTCH2-208ENST00000640021 RIMBP3CA6NJZ7 1639 aa15.59■□□□□ 0.09
NOTCH2-208ENST00000640021 RIMBP3BA6NNM3 1639 aa15.59■□□□□ 0.09
NOTCH2-208ENST00000640021 RIMBP3Q9UFD9 1639 aa15.59■□□□□ 0.09
NOTCH2-208ENST00000640021 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.59■□□□□ 0.09
NOTCH2-208ENST00000640021 SLKQ9H2G2 1235 aaPredicted RBP15.58■□□□□ 0.09
NOTCH2-208ENST00000640021 WASLO00401 505 aaPredicted RBP15.58■□□□□ 0.08
NOTCH2-208ENST00000640021 GNAI1P63096 354 aa15.58■□□□□ 0.08
NOTCH2-208ENST00000640021 ARHGAP45Q92619 1136 aa15.58■□□□□ 0.08
NOTCH2-208ENST00000640021 TBC1D2Q9BYX2 928 aa15.58■□□□□ 0.08
NOTCH2-208ENST00000640021 CPSF1Q10570 1443 aaKnown RBP15.58■□□□□ 0.08
NOTCH2-208ENST00000640021 DIP2BQ9P265 1576 aa15.57■□□□□ 0.08
NOTCH2-208ENST00000640021 TSPOAP1O95153 1857 aa15.57■□□□□ 0.08
NOTCH2-208ENST00000640021 C22orf23Q9BZE7 217 aa15.57■□□□□ 0.08
NOTCH2-208ENST00000640021 AATKQ6ZMQ8 1374 aa15.56■□□□□ 0.08
NOTCH2-208ENST00000640021 LMOD3Q0VAK6 560 aa15.56■□□□□ 0.08
NOTCH2-208ENST00000640021 ANTXR1Q9H6X2 564 aa15.56■□□□□ 0.08
NOTCH2-208ENST00000640021 IFT57Q9NWB7 429 aa15.56■□□□□ 0.08
NOTCH2-208ENST00000640021 CDK12Q9NYV4 1490 aaPredicted RBP15.56■□□□□ 0.08
NOTCH2-208ENST00000640021 HMOX1P09601 288 aa15.55■□□□□ 0.08
NOTCH2-208ENST00000640021 IL13P35225 146 aa15.55■□□□□ 0.08
NOTCH2-208ENST00000640021 HDGFP51858 240 aaKnown RBP15.55■□□□□ 0.08
NOTCH2-208ENST00000640021 NUCB1Q02818 461 aa15.55■□□□□ 0.08
NOTCH2-208ENST00000640021 IL27Q8NEV9 243 aa15.55■□□□□ 0.08
NOTCH2-208ENST00000640021 MFAP1P55081 439 aaKnown RBP15.55■□□□□ 0.08
NOTCH2-208ENST00000640021 PHACTR3Q96KR7 559 aa15.55■□□□□ 0.08
NOTCH2-208ENST00000640021 VAMP4O75379 141 aa15.54■□□□□ 0.08
NOTCH2-208ENST00000640021 FBLN1P23142 703 aa15.54■□□□□ 0.08
NOTCH2-208ENST00000640021 SIRT1Q96EB6 747 aa15.54■□□□□ 0.08
NOTCH2-208ENST00000640021 COG3Q96JB2 828 aa15.54■□□□□ 0.08
NOTCH2-208ENST00000640021 MRPL50Q8N5N7 158 aaKnown RBP15.53■□□□□ 0.08
NOTCH2-208ENST00000640021 GCC1Q96CN9 775 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms