RNA–Protein interactions for RNA: ENST00000639958.1

PRICKLE1-214, Transcript of prickle planar cell polarity protein 1, humanhuman

APPRIS P1 TSL 5

Gene PRICKLE1, Length 3,803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-214ENST00000639958 ERVK-7P63135 1459 aa12.72□□□□□ -0.37
PRICKLE1-214ENST00000639958 PLXNC1O60486 1568 aa12.71□□□□□ -0.37
PRICKLE1-214ENST00000639958 HSP90AB2PQ58FF8 381 aa12.71□□□□□ -0.37
PRICKLE1-214ENST00000639958 AEBP1Q8IUX7 1158 aa12.71□□□□□ -0.37
PRICKLE1-214ENST00000639958 ZMYM3Q14202 1370 aa12.71□□□□□ -0.38
PRICKLE1-214ENST00000639958 CLTCL1P53675 1640 aa12.71□□□□□ -0.38
PRICKLE1-214ENST00000639958 RNF123Q5XPI4 1314 aa12.71□□□□□ -0.38
PRICKLE1-214ENST00000639958 MVPQ14764 893 aaKnown RBP12.7□□□□□ -0.38
PRICKLE1-214ENST00000639958 YTHDC2Q9H6S0 1430 aaKnown RBP12.7□□□□□ -0.38
PRICKLE1-214ENST00000639958 KIF16BQ96L93 1317 aa12.7□□□□□ -0.38
PRICKLE1-214ENST00000639958 TRIM27P14373 513 aa12.7□□□□□ -0.38
PRICKLE1-214ENST00000639958 ZNF692Q9BU19 519 aaPredicted RBP12.7□□□□□ -0.38
PRICKLE1-214ENST00000639958 CHMP4BQ9H444 224 aaKnown RBP12.7□□□□□ -0.38
PRICKLE1-214ENST00000639958 PIK3C2GO75747 1445 aa12.7□□□□□ -0.38
PRICKLE1-214ENST00000639958 RIMS2Q9UQ26 1411 aa12.7□□□□□ -0.38
PRICKLE1-214ENST00000639958 OS9Q13438 667 aaPredicted RBP12.7□□□□□ -0.38
PRICKLE1-214ENST00000639958 PCDHB15Q9Y5E8 787 aa12.7□□□□□ -0.38
PRICKLE1-214ENST00000639958 ACEP12821 1306 aa12.7□□□□□ -0.38
PRICKLE1-214ENST00000639958 TRPM1Q7Z4N2 1603 aa12.69□□□□□ -0.38
PRICKLE1-214ENST00000639958 POLR3AO14802 1390 aaPredicted RBP12.69□□□□□ -0.38
PRICKLE1-214ENST00000639958 NFE2L2Q16236 605 aa12.69□□□□□ -0.38
PRICKLE1-214ENST00000639958 USHBP1Q8N6Y0 703 aa12.69□□□□□ -0.38
PRICKLE1-214ENST00000639958 TSPOAP1O95153 1857 aa12.69□□□□□ -0.38
PRICKLE1-214ENST00000639958 UNC13BO14795 1591 aa12.69□□□□□ -0.38
PRICKLE1-214ENST00000639958 HSP90AB1P08238 724 aaKnown RBP12.69□□□□□ -0.38
PRICKLE1-214ENST00000639958 GZF1Q9H116 711 aaPredicted RBP12.68□□□□□ -0.38
PRICKLE1-214ENST00000639958 FKBP5Q13451 457 aaPredicted RBP12.68□□□□□ -0.38
PRICKLE1-214ENST00000639958 SHROOM2Q13796 1616 aa12.68□□□□□ -0.38
PRICKLE1-214ENST00000639958 TNRQ92752 1358 aa12.67□□□□□ -0.38
PRICKLE1-214ENST00000639958 E9PCH4 1651 aa12.67□□□□□ -0.38
PRICKLE1-214ENST00000639958 KRT24Q2M2I5 525 aa12.67□□□□□ -0.38
PRICKLE1-214ENST00000639958 ZNF330Q9Y3S2 320 aaPredicted RBP12.67□□□□□ -0.38
PRICKLE1-214ENST00000639958 MLH3Q9UHC1 1453 aa12.67□□□□□ -0.38
PRICKLE1-214ENST00000639958 HSCBQ8IWL3 235 aa12.66□□□□□ -0.38
PRICKLE1-214ENST00000639958 SLC4A2P04920 1241 aa12.66□□□□□ -0.38
PRICKLE1-214ENST00000639958 FOXO3O43524 673 aa12.66□□□□□ -0.38
PRICKLE1-214ENST00000639958 TSPYL6Q8N831 410 aa12.66□□□□□ -0.38
PRICKLE1-214ENST00000639958 PPIP5K1Q6PFW1 1433 aa12.65□□□□□ -0.38
PRICKLE1-214ENST00000639958 LTKP29376 864 aa12.65□□□□□ -0.38
PRICKLE1-214ENST00000639958 TEFQ10587 303 aa12.65□□□□□ -0.38
PRICKLE1-214ENST00000639958 NEO1Q92859 1461 aa12.65□□□□□ -0.38
PRICKLE1-214ENST00000639958 BLMP54132 1417 aaPredicted RBP12.65□□□□□ -0.38
PRICKLE1-214ENST00000639958 NCLP19338 710 aaKnown RBP12.64□□□□□ -0.39
PRICKLE1-214ENST00000639958 NOL8Q76FK4 1167 aaKnown RBP12.64□□□□□ -0.39
PRICKLE1-214ENST00000639958 API5Q9BZZ5 524 aaKnown RBP12.64□□□□□ -0.39
PRICKLE1-214ENST00000639958 TRIM6-TRIM34B2RNG4 842 aa12.63□□□□□ -0.39
PRICKLE1-214ENST00000639958 NPC1L1Q9UHC9 1359 aa12.63□□□□□ -0.39
PRICKLE1-214ENST00000639958 EFCAB6Q5THR3 1501 aa12.63□□□□□ -0.39
PRICKLE1-214ENST00000639958 CASC1Q6TDU7 716 aa12.63□□□□□ -0.39
PRICKLE1-214ENST00000639958 MBIPQ9NS73 344 aa12.63□□□□□ -0.39
PRICKLE1-214ENST00000639958 ANKLE2Q86XL3 938 aa12.63□□□□□ -0.39
PRICKLE1-214ENST00000639958 PPP6R1Q9UPN7 881 aa12.63□□□□□ -0.39
PRICKLE1-214ENST00000639958 PROSER2Q86WR7 435 aaPredicted RBP12.62□□□□□ -0.39
PRICKLE1-214ENST00000639958 TET3O43151 1660 aa12.62□□□□□ -0.39
PRICKLE1-214ENST00000639958 TRIM35Q9UPQ4 493 aa12.62□□□□□ -0.39
PRICKLE1-214ENST00000639958 METP08581 1390 aa12.62□□□□□ -0.39
PRICKLE1-214ENST00000639958 F6X3S4 739 aa12.62□□□□□ -0.39
PRICKLE1-214ENST00000639958 ZC3H6P61129 1189 aaKnown RBP12.62□□□□□ -0.39
PRICKLE1-214ENST00000639958 NSD2O96028 1365 aa12.61□□□□□ -0.39
PRICKLE1-214ENST00000639958 C8orf58Q8NAV2 365 aa12.61□□□□□ -0.39
PRICKLE1-214ENST00000639958 TTC21BQ7Z4L5 1316 aa12.61□□□□□ -0.39
PRICKLE1-214ENST00000639958 ZMYM4Q5VZL5 1548 aa12.61□□□□□ -0.39
PRICKLE1-214ENST00000639958 KCNA6P17658 529 aa12.61□□□□□ -0.39
PRICKLE1-214ENST00000639958 ABCC3O15438 1527 aa12.61□□□□□ -0.39
PRICKLE1-214ENST00000639958 NLRP2Q9NX02 1062 aa12.6□□□□□ -0.39
PRICKLE1-214ENST00000639958 ZNF521Q96K83 1311 aa12.6□□□□□ -0.39
PRICKLE1-214ENST00000639958 SPHKAPQ2M3C7 1700 aa12.6□□□□□ -0.39
PRICKLE1-214ENST00000639958 HECW2Q9P2P5 1572 aa12.6□□□□□ -0.39
PRICKLE1-214ENST00000639958 ABCA9Q8IUA7 1624 aa12.6□□□□□ -0.39
PRICKLE1-214ENST00000639958 EIF4A2Q14240 407 aaKnown RBP12.6□□□□□ -0.39
PRICKLE1-214ENST00000639958 RILPL2Q969X0 211 aa12.6□□□□□ -0.39
PRICKLE1-214ENST00000639958 C22orf23Q9BZE7 217 aa12.6□□□□□ -0.39
PRICKLE1-214ENST00000639958 RNF17Q9BXT8 1623 aaKnown RBP12.6□□□□□ -0.39
PRICKLE1-214ENST00000639958 KIF1BO60333 1816 aa12.59□□□□□ -0.39
PRICKLE1-214ENST00000639958 C1orf141Q5JVX7 400 aa12.59□□□□□ -0.39
PRICKLE1-214ENST00000639958 SBNO2Q9Y2G9 1366 aa12.59□□□□□ -0.39
PRICKLE1-214ENST00000639958 AIMP1Q12904 312 aaKnown RBP12.59□□□□□ -0.39
PRICKLE1-214ENST00000639958 NFKBIBQ15653 356 aa12.59□□□□□ -0.39
PRICKLE1-214ENST00000639958 MADDQ8WXG6 1647 aa12.59□□□□□ -0.39
PRICKLE1-214ENST00000639958 HMMRO75330 724 aa12.59□□□□□ -0.39
PRICKLE1-214ENST00000639958 SEC24BO95487 1268 aa12.59□□□□□ -0.39
PRICKLE1-214ENST00000639958 CCDC9Q9Y3X0 531 aaKnown RBP12.59□□□□□ -0.39
PRICKLE1-214ENST00000639958 MYOM2P54296 1465 aa12.59□□□□□ -0.39
PRICKLE1-214ENST00000639958 KDM5AP29375 1690 aaKnown RBP12.59□□□□□ -0.39
PRICKLE1-214ENST00000639958 RSPH6AQ9H0K4 717 aa12.58□□□□□ -0.4
PRICKLE1-214ENST00000639958 ARAP3Q8WWN8 1544 aa12.58□□□□□ -0.4
PRICKLE1-214ENST00000639958 FRAT2O75474 233 aaPredicted RBP12.58□□□□□ -0.4
PRICKLE1-214ENST00000639958 USP35Q9P2H5 1018 aa12.58□□□□□ -0.4
PRICKLE1-214ENST00000639958 CEP152O94986 1710 aa12.58□□□□□ -0.4
PRICKLE1-214ENST00000639958 TAOK2Q9UL54 1235 aa12.58□□□□□ -0.4
PRICKLE1-214ENST00000639958 FOXD4L5Q5VV16 416 aaPredicted RBP12.57□□□□□ -0.4
PRICKLE1-214ENST00000639958 FOXD4L4Q8WXT5 416 aaPredicted RBP12.57□□□□□ -0.4
PRICKLE1-214ENST00000639958 MAP3K4Q9Y6R4 1608 aa12.57□□□□□ -0.4
PRICKLE1-214ENST00000639958 PUS7Q96PZ0 661 aaKnown RBP12.57□□□□□ -0.4
PRICKLE1-214ENST00000639958 ABCC11Q96J66 1382 aa12.57□□□□□ -0.4
PRICKLE1-214ENST00000639958 NINLQ9Y2I6 1382 aa12.57□□□□□ -0.4
PRICKLE1-214ENST00000639958 CT47B1P0C2W7 299 aaPredicted RBP12.57□□□□□ -0.4
PRICKLE1-214ENST00000639958 CCDC27Q2M243 656 aa12.56□□□□□ -0.4
PRICKLE1-214ENST00000639958 C8orf34Q49A92 452 aa12.56□□□□□ -0.4
PRICKLE1-214ENST00000639958 CFAP44Q96MT7 982 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms