RNA–Protein interactions for RNA: ENST00000639888.1

SPIN3-230, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 4,299 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-230ENST00000639888 INTS3Q68E01 1043 aaKnown RBP13.38□□□□□ -0.27
SPIN3-230ENST00000639888 DAPK1P53355 1430 aa13.38□□□□□ -0.27
SPIN3-230ENST00000639888 MVPQ14764 893 aaKnown RBP13.38□□□□□ -0.27
SPIN3-230ENST00000639888 GAS2L2Q8NHY3 880 aa13.38□□□□□ -0.27
SPIN3-230ENST00000639888 JARID2Q92833 1246 aaPredicted RBP13.38□□□□□ -0.27
SPIN3-230ENST00000639888 SMC5Q8IY18 1101 aa13.37□□□□□ -0.27
SPIN3-230ENST00000639888 PRG4Q92954 1404 aaPredicted RBP13.37□□□□□ -0.27
SPIN3-230ENST00000639888 LEKR1Q6ZMV7 388 aa13.37□□□□□ -0.27
SPIN3-230ENST00000639888 RILPL2Q969X0 211 aa13.37□□□□□ -0.27
SPIN3-230ENST00000639888 RIOK3O14730 519 aaKnown RBP13.36□□□□□ -0.27
SPIN3-230ENST00000639888 TPM4P67936 248 aa13.36□□□□□ -0.27
SPIN3-230ENST00000639888 C1orf115Q9H7X2 142 aa13.36□□□□□ -0.27
SPIN3-230ENST00000639888 VPS37CA5D8V6 355 aaPredicted RBP13.36□□□□□ -0.27
SPIN3-230ENST00000639888 HCLS1P14317 486 aaPredicted RBP13.36□□□□□ -0.27
SPIN3-230ENST00000639888 ZBTB9Q96C00 473 aa13.36□□□□□ -0.27
SPIN3-230ENST00000639888 ANO2Q9NQ90 1003 aa13.36□□□□□ -0.27
SPIN3-230ENST00000639888 IQGAP2Q13576 1575 aa13.36□□□□□ -0.27
SPIN3-230ENST00000639888 ZSCAN20P17040 1043 aaPredicted RBP13.36□□□□□ -0.27
SPIN3-230ENST00000639888 C10orf67Q8IYJ2 551 aa13.36□□□□□ -0.27
SPIN3-230ENST00000639888 TCP11L2Q8N4U5 519 aa13.36□□□□□ -0.27
SPIN3-230ENST00000639888 NGEFQ8N5V2 710 aa13.36□□□□□ -0.27
SPIN3-230ENST00000639888 AK7Q96M32 723 aa13.36□□□□□ -0.27
SPIN3-230ENST00000639888 FBXW7Q969H0 707 aa13.36□□□□□ -0.27
SPIN3-230ENST00000639888 MRC2Q9UBG0 1479 aa13.35□□□□□ -0.27
SPIN3-230ENST00000639888 CHD1LQ86WJ1 897 aa13.35□□□□□ -0.27
SPIN3-230ENST00000639888 ANKRD30BQ9BXX2 1392 aa13.35□□□□□ -0.27
SPIN3-230ENST00000639888 SRPK2P78362 688 aaKnown RBP13.35□□□□□ -0.27
SPIN3-230ENST00000639888 ANKRD50Q9ULJ7 1429 aa13.35□□□□□ -0.27
SPIN3-230ENST00000639888 ATP2B3Q16720 1220 aa13.34□□□□□ -0.27
SPIN3-230ENST00000639888 GABPB1Q06547 395 aaPredicted RBP13.33□□□□□ -0.27
SPIN3-230ENST00000639888 SNX21Q969T3 373 aa13.33□□□□□ -0.28
SPIN3-230ENST00000639888 CTTNBP2Q8WZ74 1663 aa13.33□□□□□ -0.28
SPIN3-230ENST00000639888 ROCK1Q13464 1354 aa13.33□□□□□ -0.28
SPIN3-230ENST00000639888 DHX29Q7Z478 1369 aaKnown RBP13.33□□□□□ -0.28
SPIN3-230ENST00000639888 ABCC5O15440 1437 aa13.33□□□□□ -0.28
SPIN3-230ENST00000639888 RARSP54136 660 aaKnown RBP13.33□□□□□ -0.28
SPIN3-230ENST00000639888 ZNF445P59923 1031 aa13.33□□□□□ -0.28
SPIN3-230ENST00000639888 FILIP1Q7Z7B0 1213 aa13.33□□□□□ -0.28
SPIN3-230ENST00000639888 BICD2Q8TD16 824 aa13.33□□□□□ -0.28
SPIN3-230ENST00000639888 UGGT2Q9NYU1 1516 aa13.33□□□□□ -0.28
SPIN3-230ENST00000639888 CCDC192P0DO97 292 aa13.32□□□□□ -0.28
SPIN3-230ENST00000639888 RUNDC1Q96C34 613 aa13.32□□□□□ -0.28
SPIN3-230ENST00000639888 PIBF1Q8WXW3 757 aa13.32□□□□□ -0.28
SPIN3-230ENST00000639888 TSR2Q969E8 191 aaKnown RBP13.32□□□□□ -0.28
SPIN3-230ENST00000639888 PTPN14Q15678 1187 aa13.32□□□□□ -0.28
SPIN3-230ENST00000639888 SMC3Q9UQE7 1217 aa13.32□□□□□ -0.28
SPIN3-230ENST00000639888 TROQ12816 1431 aaPredicted RBP13.32□□□□□ -0.28
SPIN3-230ENST00000639888 TNNQ9UQP3 1299 aa13.31□□□□□ -0.28
SPIN3-230ENST00000639888 IFT140Q96RY7 1462 aa13.31□□□□□ -0.28
SPIN3-230ENST00000639888 KIAA0586Q9BVV6 1533 aa13.31□□□□□ -0.28
SPIN3-230ENST00000639888 RSPH4AQ5TD94 716 aa13.31□□□□□ -0.28
SPIN3-230ENST00000639888 TRMT1Q9NXH9 659 aaKnown RBP13.31□□□□□ -0.28
SPIN3-230ENST00000639888 USP19O94966 1318 aa13.31□□□□□ -0.28
SPIN3-230ENST00000639888 EXOSC9Q06265 439 aaKnown RBP13.31□□□□□ -0.28
SPIN3-230ENST00000639888 TMCO3Q6UWJ1 677 aa13.31□□□□□ -0.28
SPIN3-230ENST00000639888 HSP90B2PQ58FF3 399 aa13.3□□□□□ -0.28
SPIN3-230ENST00000639888 WWC1Q8IX03 1113 aa13.3□□□□□ -0.28
SPIN3-230ENST00000639888 RASSF4Q9H2L5 321 aa13.3□□□□□ -0.28
SPIN3-230ENST00000639888 RSPH14Q9UHP6 348 aa13.3□□□□□ -0.28
SPIN3-230ENST00000639888 BMS1Q14692 1282 aaKnown RBP13.3□□□□□ -0.28
SPIN3-230ENST00000639888 UBXN4Q92575 508 aa13.3□□□□□ -0.28
SPIN3-230ENST00000639888 KIAA1107Q9UPP5 1409 aa13.3□□□□□ -0.28
SPIN3-230ENST00000639888 NOB1Q9ULX3 412 aaKnown RBP13.3□□□□□ -0.28
SPIN3-230ENST00000639888 PTPRGP23470 1445 aa13.29□□□□□ -0.28
SPIN3-230ENST00000639888 NINLQ9Y2I6 1382 aa13.29□□□□□ -0.28
SPIN3-230ENST00000639888 THOC2Q8NI27 1593 aaKnown RBP13.29□□□□□ -0.28
SPIN3-230ENST00000639888 NKTRP30414 1462 aaKnown RBP13.29□□□□□ -0.28
SPIN3-230ENST00000639888 H0YHG0 523 aa13.29□□□□□ -0.28
SPIN3-230ENST00000639888 TBC1D9Q6ZT07 1266 aa13.28□□□□□ -0.28
SPIN3-230ENST00000639888 CCDC144AA2RUR9 1427 aa13.28□□□□□ -0.28
SPIN3-230ENST00000639888 GTF3C6Q969F1 213 aa13.28□□□□□ -0.28
SPIN3-230ENST00000639888 OS9Q13438 667 aaPredicted RBP13.28□□□□□ -0.28
SPIN3-230ENST00000639888 LMOD3Q0VAK6 560 aa13.27□□□□□ -0.28
SPIN3-230ENST00000639888 CCDC183Q5T5S1 534 aa13.27□□□□□ -0.28
SPIN3-230ENST00000639888 KIF18AQ8NI77 898 aa13.27□□□□□ -0.28
SPIN3-230ENST00000639888 ATF7IPQ6VMQ6 1270 aa13.27□□□□□ -0.28
SPIN3-230ENST00000639888 TMEM51Q9NW97 253 aa13.27□□□□□ -0.28
SPIN3-230ENST00000639888 WDR33Q9C0J8 1336 aaKnown RBP13.27□□□□□ -0.29
SPIN3-230ENST00000639888 RLBP1P12271 317 aa13.27□□□□□ -0.29
SPIN3-230ENST00000639888 LMAN1P49257 510 aa13.27□□□□□ -0.29
SPIN3-230ENST00000639888 SLC4A10Q6U841 1118 aa13.27□□□□□ -0.29
SPIN3-230ENST00000639888 FAM177A1Q8N128 213 aaPredicted RBP13.27□□□□□ -0.29
SPIN3-230ENST00000639888 HDAC5Q9UQL6 1122 aa13.27□□□□□ -0.29
SPIN3-230ENST00000639888 ZNF608Q9ULD9 1512 aaPredicted RBP13.27□□□□□ -0.29
SPIN3-230ENST00000639888 RPRD2Q5VT52 1461 aaKnown RBP13.26□□□□□ -0.29
SPIN3-230ENST00000639888 CAMK4Q16566 473 aa13.26□□□□□ -0.29
SPIN3-230ENST00000639888 UVSSAQ2YD98 709 aa13.26□□□□□ -0.29
SPIN3-230ENST00000639888 HSP90AB3PQ58FF7 597 aa13.26□□□□□ -0.29
SPIN3-230ENST00000639888 CCDC186Q7Z3E2 898 aa13.26□□□□□ -0.29
SPIN3-230ENST00000639888 DHX37Q8IY37 1157 aaKnown RBP13.26□□□□□ -0.29
SPIN3-230ENST00000639888 ZGPATQ8N5A5 531 aaKnown RBP13.26□□□□□ -0.29
SPIN3-230ENST00000639888 SPINK5Q9NQ38 1064 aaPredicted RBP13.26□□□□□ -0.29
SPIN3-230ENST00000639888 CALRP27797 417 aaKnown RBP13.26□□□□□ -0.29
SPIN3-230ENST00000639888 IRX5P78411 483 aaPredicted RBP13.26□□□□□ -0.29
SPIN3-230ENST00000639888 CEP135Q66GS9 1140 aa13.26□□□□□ -0.29
SPIN3-230ENST00000639888 TTLL5Q6EMB2 1281 aa13.26□□□□□ -0.29
SPIN3-230ENST00000639888 CCDC191Q8NCU4 936 aa13.26□□□□□ -0.29
SPIN3-230ENST00000639888 HMMRO75330 724 aa13.26□□□□□ -0.29
SPIN3-230ENST00000639888 GIMAP6Q6P9H5 292 aa13.26□□□□□ -0.29
SPIN3-230ENST00000639888 TMEM57Q8N5G2 664 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms