RNA–Protein interactions for RNA: ENST00000639848.1

HLA-B-256, Transcript of major histocompatibility complex, class I, B, human

BASIC

Gene HLA-B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-B-256	ENST00000639848	ATAD2	Q6PL18	1390 aa		28.59	■■■□□ 2.17
HLA-B-256	ENST00000639848	QTRT2	Q9H974	415 aa	Known RBP	28.58	■■■□□ 2.17
HLA-B-256	ENST00000639848	CABP1	Q9NZU7	370 aa		28.58	■■■□□ 2.17
HLA-B-256	ENST00000639848	MARF1	Q9Y4F3	1742 aa	Known RBP	28.57	■■■□□ 2.16
HLA-B-256	ENST00000639848	SLC24A1	O60721	1099 aa		28.56	■■■□□ 2.16
HLA-B-256	ENST00000639848	CDK12	Q9NYV4	1490 aa	Predicted RBP	28.55	■■■□□ 2.16
HLA-B-256	ENST00000639848	BCL9L	Q86UU0	1499 aa		28.54	■■■□□ 2.16
HLA-B-256	ENST00000639848	RBM6	P78332	1123 aa	Known RBP	28.54	■■■□□ 2.16
HLA-B-256	ENST00000639848	TRPC5	Q9UL62	973 aa	Predicted RBP	28.54	■■■□□ 2.16
HLA-B-256	ENST00000639848	ABCA3	Q99758	1704 aa		28.54	■■■□□ 2.16
HLA-B-256	ENST00000639848	SLIT2	O94813	1529 aa		28.53	■■■□□ 2.16
HLA-B-256	ENST00000639848	PUS7	Q96PZ0	661 aa	Known RBP	28.52	■■■□□ 2.16
HLA-B-256	ENST00000639848	ATRN	O75882	1429 aa		28.52	■■■□□ 2.16
HLA-B-256	ENST00000639848	USP6	P35125	1406 aa		28.52	■■■□□ 2.16
HLA-B-256	ENST00000639848	ST20-MTHFS	A0A0A6YYL1	179 aa		28.5	■■■□□ 2.15
HLA-B-256	ENST00000639848	PLEKHG5	O94827	1062 aa		28.5	■■■□□ 2.15
HLA-B-256	ENST00000639848	TESK2	Q96S53	571 aa		28.5	■■■□□ 2.15
HLA-B-256	ENST00000639848	ZNF692	Q9BU19	519 aa	Predicted RBP	28.5	■■■□□ 2.15
HLA-B-256	ENST00000639848	UNC5CL	Q8IV45	518 aa		28.48	■■■□□ 2.15
HLA-B-256	ENST00000639848	ABTB2	Q8N961	1025 aa		28.48	■■■□□ 2.15
HLA-B-256	ENST00000639848	USP47	Q96K76	1375 aa		28.48	■■■□□ 2.15
HLA-B-256	ENST00000639848	CRYBG1	Q9Y4K1	1723 aa		28.46	■■■□□ 2.15
HLA-B-256	ENST00000639848	SSH2	Q76I76	1423 aa		28.46	■■■□□ 2.15
HLA-B-256	ENST00000639848	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	28.46	■■■□□ 2.15
HLA-B-256	ENST00000639848	CPSF1	Q10570	1443 aa	Known RBP	28.45	■■■□□ 2.15
HLA-B-256	ENST00000639848	FAM83G	A6ND36	823 aa		28.44	■■■□□ 2.14
HLA-B-256	ENST00000639848	NLRP13	Q86W25	1043 aa		28.44	■■■□□ 2.14
HLA-B-256	ENST00000639848	USP19	O94966	1318 aa		28.43	■■■□□ 2.14
HLA-B-256	ENST00000639848	NUTM2G	Q5VZR2	741 aa		28.42	■■■□□ 2.14
HLA-B-256	ENST00000639848	NWD2	Q9ULI1	1742 aa		28.41	■■■□□ 2.14
HLA-B-256	ENST00000639848	GJD4	Q96KN9	370 aa	Predicted RBP	28.41	■■■□□ 2.14
HLA-B-256	ENST00000639848	RGS12	O14924	1447 aa		28.41	■■■□□ 2.14
HLA-B-256	ENST00000639848	PHRF1	Q9P1Y6	1649 aa	Known RBP	28.4	■■■□□ 2.14
HLA-B-256	ENST00000639848	PLCH1	Q4KWH8	1693 aa		28.39	■■■□□ 2.14
HLA-B-256	ENST00000639848	PRDM11	Q9NQV5	511 aa		28.39	■■■□□ 2.14
HLA-B-256	ENST00000639848	COL14A1	Q05707	1796 aa	Known RBP	28.39	■■■□□ 2.13
HLA-B-256	ENST00000639848	TTC21A	Q8NDW8	1320 aa		28.39	■■■□□ 2.13
HLA-B-256	ENST00000639848	KTN1	Q86UP2	1357 aa	Known RBP	28.38	■■■□□ 2.13
HLA-B-256	ENST00000639848	NINL	Q9Y2I6	1382 aa		28.38	■■■□□ 2.13
HLA-B-256	ENST00000639848	VPS72	Q15906	364 aa		28.38	■■■□□ 2.13
HLA-B-256	ENST00000639848	TTC21B	Q7Z4L5	1316 aa		28.38	■■■□□ 2.13
HLA-B-256	ENST00000639848	KIAA0232	Q92628	1395 aa		28.37	■■■□□ 2.13
HLA-B-256	ENST00000639848	TMF1	P82094	1093 aa		28.36	■■■□□ 2.13
HLA-B-256	ENST00000639848	TMC1	Q8TDI8	760 aa		28.36	■■■□□ 2.13
HLA-B-256	ENST00000639848	AKAP12	Q02952	1782 aa		28.36	■■■□□ 2.13
HLA-B-256	ENST00000639848	CPD	O75976	1380 aa		28.36	■■■□□ 2.13
HLA-B-256	ENST00000639848	CD163L1	Q9NR16	1453 aa		28.35	■■■□□ 2.13
HLA-B-256	ENST00000639848	NLRP6	P59044	892 aa		28.35	■■■□□ 2.13
HLA-B-256	ENST00000639848	BTG4	Q9NY30	223 aa		28.35	■■■□□ 2.13
HLA-B-256	ENST00000639848	NRK	Q7Z2Y5	1582 aa		28.35	■■■□□ 2.13
HLA-B-256	ENST00000639848	GC	P02774	474 aa		28.34	■■■□□ 2.13
HLA-B-256	ENST00000639848	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	28.34	■■■□□ 2.13
HLA-B-256	ENST00000639848	SLC12A5	Q9H2X9	1139 aa		28.34	■■■□□ 2.13
HLA-B-256	ENST00000639848	TERF2IP	Q9NYB0	399 aa		28.34	■■■□□ 2.13
HLA-B-256	ENST00000639848	ZC3H6	P61129	1189 aa	Known RBP	28.32	■■■□□ 2.12
HLA-B-256	ENST00000639848	CDCA8	Q53HL2	280 aa		28.32	■■■□□ 2.12
HLA-B-256	ENST00000639848	SLIT3	O75094	1523 aa		28.32	■■■□□ 2.12
HLA-B-256	ENST00000639848	PIK3C2A	O00443	1686 aa		28.32	■■■□□ 2.12
HLA-B-256	ENST00000639848	MON2	Q7Z3U7	1717 aa		28.3	■■■□□ 2.12
HLA-B-256	ENST00000639848	GLI3	P10071	1580 aa		28.3	■■■□□ 2.12
HLA-B-256	ENST00000639848	NRAP	Q86VF7	1730 aa		28.29	■■■□□ 2.12
HLA-B-256	ENST00000639848	EDC4	Q6P2E9	1401 aa	Known RBP	28.29	■■■□□ 2.12
HLA-B-256	ENST00000639848		A0A1W2PP64	1363 aa		28.28	■■■□□ 2.12
HLA-B-256	ENST00000639848	CHRNA2	Q15822	529 aa		28.27	■■■□□ 2.12
HLA-B-256	ENST00000639848	CCDC9	Q9Y3X0	531 aa	Known RBP	28.27	■■■□□ 2.12
HLA-B-256	ENST00000639848	USP31	Q70CQ4	1352 aa		28.25	■■■□□ 2.11
HLA-B-256	ENST00000639848	ONECUT3	O60422	494 aa	Predicted RBP	28.25	■■■□□ 2.11
HLA-B-256	ENST00000639848	KCNH5	Q8NCM2	988 aa		28.25	■■■□□ 2.11
HLA-B-256	ENST00000639848	EIF4G2	P78344	907 aa	Known RBP eCLIP	28.23	■■■□□ 2.11
HLA-B-256	ENST00000639848	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	28.22	■■■□□ 2.11
HLA-B-256	ENST00000639848	AATK	Q6ZMQ8	1374 aa		28.22	■■■□□ 2.11
HLA-B-256	ENST00000639848	ANKRD36B	Q8N2N9	1353 aa		28.22	■■■□□ 2.11
HLA-B-256	ENST00000639848	SPATA31A5	Q5VU36	1347 aa		28.21	■■■□□ 2.11
HLA-B-256	ENST00000639848	SPATA31A7	Q8IWB4	1347 aa		28.21	■■■□□ 2.11
HLA-B-256	ENST00000639848	LMO7	Q8WWI1	1683 aa		28.21	■■■□□ 2.11
HLA-B-256	ENST00000639848	UPF1	Q92900	1129 aa	Known RBP eCLIP	28.2	■■■□□ 2.1
HLA-B-256	ENST00000639848	CAMTA1	Q9Y6Y1	1673 aa		28.19	■■■□□ 2.1
HLA-B-256	ENST00000639848	NME9	Q86XW9	330 aa		28.18	■■■□□ 2.1
HLA-B-256	ENST00000639848	USP54	Q70EL1	1684 aa		28.18	■■■□□ 2.1
HLA-B-256	ENST00000639848	ARHGEF25	Q86VW2	580 aa		28.17	■■■□□ 2.1
HLA-B-256	ENST00000639848	SEPT12	Q8IYM1	358 aa		28.17	■■■□□ 2.1
HLA-B-256	ENST00000639848	STRN4	Q9NRL3	753 aa		28.17	■■■□□ 2.1
HLA-B-256	ENST00000639848	EVA1C	P58658	441 aa		28.16	■■■□□ 2.1
HLA-B-256	ENST00000639848	SPATA31A1	Q5TZJ5	1347 aa		28.16	■■■□□ 2.1
HLA-B-256	ENST00000639848	NFAT5	O94916	1531 aa		28.15	■■■□□ 2.1
HLA-B-256	ENST00000639848	HSPA5	P11021	654 aa	Known RBP	28.14	■■■□□ 2.1
HLA-B-256	ENST00000639848	FAM98C	Q17RN3	349 aa	Known RBP	28.14	■■■□□ 2.1
HLA-B-256	ENST00000639848	ZRANB1	Q9UGI0	708 aa		28.14	■■■□□ 2.1
HLA-B-256	ENST00000639848	COL5A2	P05997	1499 aa	Predicted RBP	28.14	■■■□□ 2.09
HLA-B-256	ENST00000639848	OVOS2	A0A0J9YW53	1432 aa		28.13	■■■□□ 2.09
HLA-B-256	ENST00000639848	OVOS2	Q6IE36	1432 aa		28.13	■■■□□ 2.09
HLA-B-256	ENST00000639848	ZBTB7C	A1YPR0	619 aa		28.11	■■■□□ 2.09
HLA-B-256	ENST00000639848	ABCC6	O95255	1503 aa		28.11	■■■□□ 2.09
HLA-B-256	ENST00000639848	SOX12	O15370	315 aa		28.1	■■■□□ 2.09
HLA-B-256	ENST00000639848	LARP1	Q6PKG0	1096 aa	Known RBP	28.1	■■■□□ 2.09
HLA-B-256	ENST00000639848		A0A0G2JS52	829 aa		28.08	■■■□□ 2.09
HLA-B-256	ENST00000639848	MYT1	Q01538	1121 aa		28.08	■■■□□ 2.09
HLA-B-256	ENST00000639848	BARGIN	Q6ZT62	677 aa		28.08	■■■□□ 2.09
HLA-B-256	ENST00000639848	COL18A1	P39060	1754 aa		28.07	■■■□□ 2.08
HLA-B-256	ENST00000639848	KRT27	Q7Z3Y8	459 aa		28.07	■■■□□ 2.08

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms